RNA–Protein interactions for RNA: ENST00000389363.4

TM6SF2-201, Transcript of transmembrane 6 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF2, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-201ENST00000389363 ZNF335Q9H4Z2 1342 aaPredicted RBP23.27■■□□□ 1.32
TM6SF2-201ENST00000389363 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
TM6SF2-201ENST00000389363 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
TM6SF2-201ENST00000389363 KIF1BO60333 1816 aa23.26■■□□□ 1.31
TM6SF2-201ENST00000389363 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.25■■□□□ 1.31
TM6SF2-201ENST00000389363 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
TM6SF2-201ENST00000389363 NUTM2DQ5VT03 806 aaPredicted RBP23.24■■□□□ 1.31
TM6SF2-201ENST00000389363 LTBP4Q8N2S1 1624 aa23.24■■□□□ 1.31
TM6SF2-201ENST00000389363 BCANQ96GW7 911 aa23.23■■□□□ 1.31
TM6SF2-201ENST00000389363 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
TM6SF2-201ENST00000389363 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
TM6SF2-201ENST00000389363 PLEKHG1Q9ULL1 1385 aa23.2■■□□□ 1.31
TM6SF2-201ENST00000389363 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
TM6SF2-201ENST00000389363 NEXMIFQ5QGS0 1516 aa23.17■■□□□ 1.3
TM6SF2-201ENST00000389363 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
TM6SF2-201ENST00000389363 CPS1P31327 1500 aa23.13■■□□□ 1.29
TM6SF2-201ENST00000389363 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
TM6SF2-201ENST00000389363 RPGRIP1LQ68CZ1 1315 aa23.13■■□□□ 1.29
TM6SF2-201ENST00000389363 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
TM6SF2-201ENST00000389363 STRCP1A6NGW2 1772 aa23.1■■□□□ 1.29
TM6SF2-201ENST00000389363 ADAMTS13Q76LX8 1427 aa23.1■■□□□ 1.29
TM6SF2-201ENST00000389363 VGFO15240 615 aaPredicted RBP23.09■■□□□ 1.29
TM6SF2-201ENST00000389363 TBX22Q9Y458 520 aa23.09■■□□□ 1.29
TM6SF2-201ENST00000389363 PPLO60437 1756 aa23.08■■□□□ 1.29
TM6SF2-201ENST00000389363 DIP2AQ14689 1571 aa23.07■■□□□ 1.28
TM6SF2-201ENST00000389363 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
TM6SF2-201ENST00000389363 IQSEC2Q5JU85 1478 aa23.07■■□□□ 1.28
TM6SF2-201ENST00000389363 NRXN3Q9Y4C0 1643 aa23.06■■□□□ 1.28
TM6SF2-201ENST00000389363 KCNA6P17658 529 aa23.05■■□□□ 1.28
TM6SF2-201ENST00000389363 FBXO41Q8TF61 875 aa23.05■■□□□ 1.28
TM6SF2-201ENST00000389363 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
TM6SF2-201ENST00000389363 IFT172Q9UG01 1749 aa23.02■■□□□ 1.28
TM6SF2-201ENST00000389363 NWD1Q149M9 1564 aa23.02■■□□□ 1.28
TM6SF2-201ENST00000389363 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
TM6SF2-201ENST00000389363 PIK3R4Q99570 1358 aa23■■□□□ 1.27
TM6SF2-201ENST00000389363 ILDR1Q86SU0 546 aaPredicted RBP23■■□□□ 1.27
TM6SF2-201ENST00000389363 ADGRF5Q8IZF2 1346 aa22.99■■□□□ 1.27
TM6SF2-201ENST00000389363 NKTRP30414 1462 aaKnown RBP22.99■■□□□ 1.27
TM6SF2-201ENST00000389363 DHX57Q6P158 1386 aaKnown RBP22.98■■□□□ 1.27
TM6SF2-201ENST00000389363 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
TM6SF2-201ENST00000389363 METP08581 1390 aa22.97■■□□□ 1.27
TM6SF2-201ENST00000389363 PROSER2Q86WR7 435 aaPredicted RBP22.97■■□□□ 1.27
TM6SF2-201ENST00000389363 ALKQ9UM73 1620 aa22.95■■□□□ 1.26
TM6SF2-201ENST00000389363 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
TM6SF2-201ENST00000389363 AMOTL2Q9Y2J4 779 aa22.95■■□□□ 1.26
TM6SF2-201ENST00000389363 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
TM6SF2-201ENST00000389363 UBAP1LF5GYI3 381 aa22.93■■□□□ 1.26
TM6SF2-201ENST00000389363 RBM33Q96EV2 1170 aaKnown RBP22.93■■□□□ 1.26
TM6SF2-201ENST00000389363 MYOM2P54296 1465 aa22.93■■□□□ 1.26
TM6SF2-201ENST00000389363 SETD1AO15047 1707 aaKnown RBP22.93■■□□□ 1.26
TM6SF2-201ENST00000389363 PIK3C2GO75747 1445 aa22.92■■□□□ 1.26
TM6SF2-201ENST00000389363 XIRP1Q702N8 1843 aaKnown RBP22.91■■□□□ 1.26
TM6SF2-201ENST00000389363 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
TM6SF2-201ENST00000389363 XRN1Q8IZH2 1706 aaKnown RBP22.9■■□□□ 1.26
TM6SF2-201ENST00000389363 NRXN1Q9ULB1 1477 aa22.9■■□□□ 1.26
TM6SF2-201ENST00000389363 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.26
TM6SF2-201ENST00000389363 TOM1O60784 492 aa22.87■■□□□ 1.25
TM6SF2-201ENST00000389363 SIN3AQ96ST3 1273 aa22.87■■□□□ 1.25
TM6SF2-201ENST00000389363 STAC3Q96MF2 364 aa22.86■■□□□ 1.25
TM6SF2-201ENST00000389363 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
TM6SF2-201ENST00000389363 C14orf93Q9H972 538 aaKnown RBP22.84■■□□□ 1.25
TM6SF2-201ENST00000389363 CFAP70Q5T0N1 1121 aa22.83■■□□□ 1.25
TM6SF2-201ENST00000389363 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
TM6SF2-201ENST00000389363 NCOA3Q9Y6Q9 1424 aa22.83■■□□□ 1.25
TM6SF2-201ENST00000389363 PIP4K2BP78356 416 aa22.82■■□□□ 1.24
TM6SF2-201ENST00000389363 TMEM132EQ6IEE7 984 aa22.82■■□□□ 1.24
TM6SF2-201ENST00000389363 MSH6P52701 1360 aa22.82■■□□□ 1.24
TM6SF2-201ENST00000389363 LAMC1P11047 1609 aa22.82■■□□□ 1.24
TM6SF2-201ENST00000389363 SCAF1Q9H7N4 1312 aaKnown RBP22.82■■□□□ 1.24
TM6SF2-201ENST00000389363 ASXL1Q8IXJ9 1541 aa22.81■■□□□ 1.24
TM6SF2-201ENST00000389363 PTCH1Q13635 1447 aa22.79■■□□□ 1.24
TM6SF2-201ENST00000389363 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
TM6SF2-201ENST00000389363 STK26Q9P289 416 aa22.79■■□□□ 1.24
TM6SF2-201ENST00000389363 PRAG1Q86YV5 1406 aa22.79■■□□□ 1.24
TM6SF2-201ENST00000389363 LRPPRCP42704 1394 aaKnown RBP22.78■■□□□ 1.24
TM6SF2-201ENST00000389363 L3MBTL2Q969R5 705 aa22.77■■□□□ 1.24
TM6SF2-201ENST00000389363 C19orf44Q9H6X5 657 aa22.77■■□□□ 1.24
TM6SF2-201ENST00000389363 YTHDC2Q9H6S0 1430 aaKnown RBP22.76■■□□□ 1.23
TM6SF2-201ENST00000389363 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
TM6SF2-201ENST00000389363 TECPR2O15040 1411 aa22.74■■□□□ 1.23
TM6SF2-201ENST00000389363 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.74■■□□□ 1.23
TM6SF2-201ENST00000389363 ATF3P18847 181 aa22.72■■□□□ 1.23
TM6SF2-201ENST00000389363 KNDC1Q76NI1 1749 aa22.72■■□□□ 1.23
TM6SF2-201ENST00000389363 ADGRL3Q9HAR2 1447 aa22.72■■□□□ 1.23
TM6SF2-201ENST00000389363 CADPS2Q86UW7 1296 aa22.72■■□□□ 1.23
TM6SF2-201ENST00000389363 ADGRB1O14514 1584 aa22.71■■□□□ 1.23
TM6SF2-201ENST00000389363 NALCNQ8IZF0 1738 aa22.71■■□□□ 1.23
TM6SF2-201ENST00000389363 SLAIN2Q9P270 581 aa22.7■■□□□ 1.22
TM6SF2-201ENST00000389363 DCCP43146 1447 aa22.7■■□□□ 1.22
TM6SF2-201ENST00000389363 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
TM6SF2-201ENST00000389363 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
TM6SF2-201ENST00000389363 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
TM6SF2-201ENST00000389363 PLEKHH1Q9ULM0 1364 aa22.66■■□□□ 1.22
TM6SF2-201ENST00000389363 KIAA1210Q9ULL0 1709 aa22.66■■□□□ 1.22
TM6SF2-201ENST00000389363 SIRT1Q96EB6 747 aa22.66■■□□□ 1.22
TM6SF2-201ENST00000389363 HSPA1LP34931 641 aa22.65■■□□□ 1.22
TM6SF2-201ENST00000389363 TRAK1Q9UPV9 953 aa22.65■■□□□ 1.22
TM6SF2-201ENST00000389363 ROBO1Q9Y6N7 1651 aa22.64■■□□□ 1.22
TM6SF2-201ENST00000389363 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
TM6SF2-201ENST00000389363 PRAM1Q96QH2 718 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms