RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PLEKHG1Q9ULL1 1385 aa28.76■■■□□ 2.2
TMEM88B-201ENST00000378821 HSPA1LP34931 641 aa28.76■■■□□ 2.19
TMEM88B-201ENST00000378821 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
TMEM88B-201ENST00000378821 SLC26A8Q96RN1 970 aa28.76■■■□□ 2.19
TMEM88B-201ENST00000378821 NAIPQ13075 1403 aa28.75■■■□□ 2.19
TMEM88B-201ENST00000378821 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
TMEM88B-201ENST00000378821 SCAF1Q9H7N4 1312 aaKnown RBP28.72■■■□□ 2.19
TMEM88B-201ENST00000378821 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.7■■■□□ 2.18
TMEM88B-201ENST00000378821 NKTRP30414 1462 aaKnown RBP28.7■■■□□ 2.18
TMEM88B-201ENST00000378821 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
TMEM88B-201ENST00000378821 SPHKAPQ2M3C7 1700 aa28.69■■■□□ 2.18
TMEM88B-201ENST00000378821 TMEM94Q12767 1356 aa28.67■■■□□ 2.18
TMEM88B-201ENST00000378821 TBX22Q9Y458 520 aa28.67■■■□□ 2.18
TMEM88B-201ENST00000378821 ILDR2Q71H61 639 aa28.66■■■□□ 2.18
TMEM88B-201ENST00000378821 HFM1A2PYH4 1435 aa28.66■■■□□ 2.18
TMEM88B-201ENST00000378821 ADAMTS13Q76LX8 1427 aa28.63■■■□□ 2.17
TMEM88B-201ENST00000378821 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
TMEM88B-201ENST00000378821 CHGAP10645 457 aaKnown RBP28.63■■■□□ 2.17
TMEM88B-201ENST00000378821 PROSER2Q86WR7 435 aaPredicted RBP28.62■■■□□ 2.17
TMEM88B-201ENST00000378821 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
TMEM88B-201ENST00000378821 BCANQ96GW7 911 aa28.61■■■□□ 2.17
TMEM88B-201ENST00000378821 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
TMEM88B-201ENST00000378821 PIK3R4Q99570 1358 aa28.59■■■□□ 2.17
TMEM88B-201ENST00000378821 TRPM2O94759 1503 aa28.58■■■□□ 2.17
TMEM88B-201ENST00000378821 MED1Q15648 1581 aaPredicted RBP28.56■■■□□ 2.16
TMEM88B-201ENST00000378821 NCOA3Q9Y6Q9 1424 aa28.56■■■□□ 2.16
TMEM88B-201ENST00000378821 CLTCL1P53675 1640 aa28.54■■■□□ 2.16
TMEM88B-201ENST00000378821 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
TMEM88B-201ENST00000378821 RBM33Q96EV2 1170 aaKnown RBP28.52■■■□□ 2.16
TMEM88B-201ENST00000378821 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
TMEM88B-201ENST00000378821 SETBP1Q9Y6X0 1596 aa28.52■■■□□ 2.16
TMEM88B-201ENST00000378821 NRXN3Q9Y4C0 1643 aa28.51■■■□□ 2.15
TMEM88B-201ENST00000378821 MSH6P52701 1360 aa28.5■■■□□ 2.15
TMEM88B-201ENST00000378821 KIF1BO60333 1816 aa28.48■■■□□ 2.15
TMEM88B-201ENST00000378821 ROBO1Q9Y6N7 1651 aa28.47■■■□□ 2.15
TMEM88B-201ENST00000378821 NEXMIFQ5QGS0 1516 aa28.47■■■□□ 2.15
TMEM88B-201ENST00000378821 SOCS7O14512 581 aa28.46■■■□□ 2.15
TMEM88B-201ENST00000378821 PTPRUQ92729 1446 aa28.45■■■□□ 2.15
TMEM88B-201ENST00000378821 TRIM52Q96A61 297 aa28.44■■■□□ 2.14
TMEM88B-201ENST00000378821 SLAIN2Q9P270 581 aa28.43■■■□□ 2.14
TMEM88B-201ENST00000378821 ZNF326Q5BKZ1 582 aaKnown RBP28.42■■■□□ 2.14
TMEM88B-201ENST00000378821 XRN1Q8IZH2 1706 aaKnown RBP28.41■■■□□ 2.14
TMEM88B-201ENST00000378821 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
TMEM88B-201ENST00000378821 AMOTL2Q9Y2J4 779 aa28.41■■■□□ 2.14
TMEM88B-201ENST00000378821 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.39■■■□□ 2.14
TMEM88B-201ENST00000378821 C19orf44Q9H6X5 657 aa28.38■■■□□ 2.13
TMEM88B-201ENST00000378821 METP08581 1390 aa28.37■■■□□ 2.13
TMEM88B-201ENST00000378821 RPGRIP1LQ68CZ1 1315 aa28.34■■■□□ 2.13
TMEM88B-201ENST00000378821 CADPS2Q86UW7 1296 aa28.33■■■□□ 2.13
TMEM88B-201ENST00000378821 VGFO15240 615 aaPredicted RBP28.31■■■□□ 2.12
TMEM88B-201ENST00000378821 SETD1AO15047 1707 aaKnown RBP28.3■■■□□ 2.12
TMEM88B-201ENST00000378821 DCCP43146 1447 aa28.3■■■□□ 2.12
TMEM88B-201ENST00000378821 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
TMEM88B-201ENST00000378821 PPLO60437 1756 aa28.29■■■□□ 2.12
TMEM88B-201ENST00000378821 PHLPP1O60346 1717 aa28.29■■■□□ 2.12
TMEM88B-201ENST00000378821 C14orf37Q86TY3 774 aa28.28■■■□□ 2.12
TMEM88B-201ENST00000378821 ATF3P18847 181 aa28.27■■■□□ 2.12
TMEM88B-201ENST00000378821 MPHOSPH9Q99550 1183 aa28.27■■■□□ 2.12
TMEM88B-201ENST00000378821 FOXD1Q16676 465 aa28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 PHF23Q9BUL5 403 aaPredicted RBP28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 AHDC1Q5TGY3 1603 aaPredicted RBP28.23■■■□□ 2.11
TMEM88B-201ENST00000378821 SPATA31E1Q6ZUB1 1445 aa28.22■■■□□ 2.11
TMEM88B-201ENST00000378821 RGS17Q9UGC6 210 aaPredicted RBP28.22■■■□□ 2.11
TMEM88B-201ENST00000378821 SETD5Q9C0A6 1442 aa28.21■■■□□ 2.11
TMEM88B-201ENST00000378821 CCDC144AA2RUR9 1427 aa28.2■■■□□ 2.11
TMEM88B-201ENST00000378821 ADGRL3Q9HAR2 1447 aa28.19■■■□□ 2.1
TMEM88B-201ENST00000378821 JCADQ9P266 1359 aa28.19■■■□□ 2.1
TMEM88B-201ENST00000378821 PTCH1Q13635 1447 aa28.18■■■□□ 2.1
TMEM88B-201ENST00000378821 MST1RQ04912 1400 aa28.18■■■□□ 2.1
TMEM88B-201ENST00000378821 NALCNQ8IZF0 1738 aa28.17■■■□□ 2.1
TMEM88B-201ENST00000378821 IFT172Q9UG01 1749 aa28.17■■■□□ 2.1
TMEM88B-201ENST00000378821 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
TMEM88B-201ENST00000378821 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
TMEM88B-201ENST00000378821 ROBO2Q9HCK4 1378 aa28.12■■■□□ 2.09
TMEM88B-201ENST00000378821 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
TMEM88B-201ENST00000378821 SHPRHQ149N8 1683 aa28.1■■■□□ 2.09
TMEM88B-201ENST00000378821 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
TMEM88B-201ENST00000378821 NHSL1Q5SYE7 1610 aa28.09■■■□□ 2.09
TMEM88B-201ENST00000378821 RAB3GAP2Q9H2M9 1393 aa28.09■■■□□ 2.09
TMEM88B-201ENST00000378821 SPATA31A6Q5VVP1 1343 aa28.08■■■□□ 2.09
TMEM88B-201ENST00000378821 RGL3Q3MIN7 710 aa28.07■■■□□ 2.08
TMEM88B-201ENST00000378821 PIK3C2GO75747 1445 aa28.04■■■□□ 2.08
TMEM88B-201ENST00000378821 LAMC1P11047 1609 aa28.03■■■□□ 2.08
TMEM88B-201ENST00000378821 C1orf167Q5SNV9 1468 aa28.03■■■□□ 2.08
TMEM88B-201ENST00000378821 TECPR2O15040 1411 aa28.03■■■□□ 2.08
TMEM88B-201ENST00000378821 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
TMEM88B-201ENST00000378821 LRP6O75581 1613 aa28.02■■■□□ 2.08
TMEM88B-201ENST00000378821 HRCP23327 699 aa28.01■■■□□ 2.07
TMEM88B-201ENST00000378821 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
TMEM88B-201ENST00000378821 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
TMEM88B-201ENST00000378821 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
TMEM88B-201ENST00000378821 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
TMEM88B-201ENST00000378821 MYOM2P54296 1465 aa27.96■■■□□ 2.07
TMEM88B-201ENST00000378821 LRRC59Q96AG4 307 aaKnown RBP27.96■■■□□ 2.07
TMEM88B-201ENST00000378821 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
TMEM88B-201ENST00000378821 C14orf93Q9H972 538 aaKnown RBP27.94■■■□□ 2.06
TMEM88B-201ENST00000378821 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
TMEM88B-201ENST00000378821 TMEM132EQ6IEE7 984 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms