RNA–Protein interactions for RNA: ENST00000375320.5

APOA1-203, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene APOA1, Length 940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-203ENST00000375320 DIP2AQ14689 1571 aa20.55■□□□□ 0.88
APOA1-203ENST00000375320 LRRC7Q96NW7 1537 aa20.54■□□□□ 0.88
APOA1-203ENST00000375320 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
APOA1-203ENST00000375320 CHD2O14647 1828 aaKnown RBP20.54■□□□□ 0.88
APOA1-203ENST00000375320 CHGAP10645 457 aaKnown RBP20.53■□□□□ 0.88
APOA1-203ENST00000375320 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
APOA1-203ENST00000375320 PLEKHG1Q9ULL1 1385 aa20.52■□□□□ 0.88
APOA1-203ENST00000375320 NEXMIFQ5QGS0 1516 aa20.52■□□□□ 0.87
APOA1-203ENST00000375320 ALKQ9UM73 1620 aa20.5■□□□□ 0.87
APOA1-203ENST00000375320 PPLO60437 1756 aa20.49■□□□□ 0.87
APOA1-203ENST00000375320 PPP1R15AO75807 674 aaPredicted RBP20.49■□□□□ 0.87
APOA1-203ENST00000375320 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
APOA1-203ENST00000375320 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
APOA1-203ENST00000375320 SETBP1Q9Y6X0 1596 aa20.48■□□□□ 0.87
APOA1-203ENST00000375320 SLC4A1APQ9BWU0 796 aaKnown RBP20.48■□□□□ 0.87
APOA1-203ENST00000375320 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
APOA1-203ENST00000375320 SLC26A8Q96RN1 970 aa20.46■□□□□ 0.87
APOA1-203ENST00000375320 UBAP1LF5GYI3 381 aa20.45■□□□□ 0.86
APOA1-203ENST00000375320 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
APOA1-203ENST00000375320 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
APOA1-203ENST00000375320 RAB3GAP2Q9H2M9 1393 aa20.44■□□□□ 0.86
APOA1-203ENST00000375320 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
APOA1-203ENST00000375320 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
APOA1-203ENST00000375320 BCANQ96GW7 911 aa20.43■□□□□ 0.86
APOA1-203ENST00000375320 XRN1Q8IZH2 1706 aaKnown RBP20.43■□□□□ 0.86
APOA1-203ENST00000375320 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
APOA1-203ENST00000375320 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
APOA1-203ENST00000375320 CCDC144AA2RUR9 1427 aa20.39■□□□□ 0.85
APOA1-203ENST00000375320 FOXD1Q16676 465 aa20.39■□□□□ 0.85
APOA1-203ENST00000375320 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
APOA1-203ENST00000375320 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
APOA1-203ENST00000375320 KCNA6P17658 529 aa20.36■□□□□ 0.85
APOA1-203ENST00000375320 MPHOSPH9Q99550 1183 aa20.36■□□□□ 0.85
APOA1-203ENST00000375320 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
APOA1-203ENST00000375320 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
APOA1-203ENST00000375320 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
APOA1-203ENST00000375320 TOM1O60784 492 aa20.33■□□□□ 0.85
APOA1-203ENST00000375320 PIP4K2BP78356 416 aa20.32■□□□□ 0.84
APOA1-203ENST00000375320 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
APOA1-203ENST00000375320 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
APOA1-203ENST00000375320 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
APOA1-203ENST00000375320 ROBO1Q9Y6N7 1651 aa20.31■□□□□ 0.84
APOA1-203ENST00000375320 NALCNQ8IZF0 1738 aa20.3■□□□□ 0.84
APOA1-203ENST00000375320 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.3■□□□□ 0.84
APOA1-203ENST00000375320 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
APOA1-203ENST00000375320 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.84
APOA1-203ENST00000375320 METP08581 1390 aa20.26■□□□□ 0.83
APOA1-203ENST00000375320 MSH6P52701 1360 aa20.26■□□□□ 0.83
APOA1-203ENST00000375320 LAMC1P11047 1609 aa20.25■□□□□ 0.83
APOA1-203ENST00000375320 RPGRIP1LQ68CZ1 1315 aa20.25■□□□□ 0.83
APOA1-203ENST00000375320 KNDC1Q76NI1 1749 aa20.24■□□□□ 0.83
APOA1-203ENST00000375320 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
APOA1-203ENST00000375320 NCOA3Q9Y6Q9 1424 aa20.22■□□□□ 0.83
APOA1-203ENST00000375320 HSPA1LP34931 641 aa20.21■□□□□ 0.83
APOA1-203ENST00000375320 MYOM2P54296 1465 aa20.21■□□□□ 0.83
APOA1-203ENST00000375320 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
APOA1-203ENST00000375320 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
APOA1-203ENST00000375320 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
APOA1-203ENST00000375320 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
APOA1-203ENST00000375320 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
APOA1-203ENST00000375320 PIK3C2GO75747 1445 aa20.19■□□□□ 0.82
APOA1-203ENST00000375320 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
APOA1-203ENST00000375320 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
APOA1-203ENST00000375320 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
APOA1-203ENST00000375320 DCCP43146 1447 aa20.17■□□□□ 0.82
APOA1-203ENST00000375320 HRCP23327 699 aa20.16■□□□□ 0.82
APOA1-203ENST00000375320 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
APOA1-203ENST00000375320 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
APOA1-203ENST00000375320 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
APOA1-203ENST00000375320 ADGRL3Q9HAR2 1447 aa20.16■□□□□ 0.82
APOA1-203ENST00000375320 NRXN1Q9ULB1 1477 aa20.16■□□□□ 0.82
APOA1-203ENST00000375320 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
APOA1-203ENST00000375320 NHSL1Q5SYE7 1610 aa20.12■□□□□ 0.81
APOA1-203ENST00000375320 ROBO2Q9HCK4 1378 aa20.11■□□□□ 0.81
APOA1-203ENST00000375320 AHDC1Q5TGY3 1603 aaPredicted RBP20.11■□□□□ 0.81
APOA1-203ENST00000375320 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
APOA1-203ENST00000375320 CDC42BPGQ6DT37 1551 aa20.1■□□□□ 0.81
APOA1-203ENST00000375320 TECPR2O15040 1411 aa20.09■□□□□ 0.81
APOA1-203ENST00000375320 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
APOA1-203ENST00000375320 MST1RQ04912 1400 aa20.08■□□□□ 0.8
APOA1-203ENST00000375320 ATF3P18847 181 aa20.07■□□□□ 0.8
APOA1-203ENST00000375320 CADPS2Q86UW7 1296 aa20.07■□□□□ 0.8
APOA1-203ENST00000375320 SLAIN2Q9P270 581 aa20.07■□□□□ 0.8
APOA1-203ENST00000375320 SHPRHQ149N8 1683 aa20.05■□□□□ 0.8
APOA1-203ENST00000375320 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
APOA1-203ENST00000375320 YTHDC2Q9H6S0 1430 aaKnown RBP20.04■□□□□ 0.8
APOA1-203ENST00000375320 FMN2Q9NZ56 1722 aa20.04■□□□□ 0.8
APOA1-203ENST00000375320 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
APOA1-203ENST00000375320 ARHGEF28Q8N1W1 1705 aaKnown RBP20.02■□□□□ 0.79
APOA1-203ENST00000375320 KIAA1210Q9ULL0 1709 aa20.02■□□□□ 0.79
APOA1-203ENST00000375320 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
APOA1-203ENST00000375320 DLC1Q96QB1 1528 aa19.99■□□□□ 0.79
APOA1-203ENST00000375320 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
APOA1-203ENST00000375320 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
APOA1-203ENST00000375320 ABCC11Q96J66 1382 aa19.98■□□□□ 0.79
APOA1-203ENST00000375320 STK26Q9P289 416 aa19.98■□□□□ 0.79
APOA1-203ENST00000375320 RGPD8O14715 1765 aaPredicted RBP19.97■□□□□ 0.79
APOA1-203ENST00000375320 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
APOA1-203ENST00000375320 ADGRB2O60241 1585 aa19.96■□□□□ 0.79
APOA1-203ENST00000375320 CFAP70Q5T0N1 1121 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms