RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 IQSEC2Q5JU85 1478 aa31.03■■■□□ 2.56
MAP1LC3A-202ENST00000374837 HDGFP51858 240 aaKnown RBP31.02■■■□□ 2.56
MAP1LC3A-202ENST00000374837 POLR1AO95602 1720 aaPredicted RBP31.01■■■□□ 2.56
MAP1LC3A-202ENST00000374837 RIMS2Q9UQ26 1411 aa31.01■■■□□ 2.55
MAP1LC3A-202ENST00000374837 ZFYVE9O95405 1425 aa31■■■□□ 2.55
MAP1LC3A-202ENST00000374837 ZNF335Q9H4Z2 1342 aaPredicted RBP30.98■■■□□ 2.55
MAP1LC3A-202ENST00000374837 CLTCL1P53675 1640 aa30.98■■■□□ 2.55
MAP1LC3A-202ENST00000374837 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
MAP1LC3A-202ENST00000374837 NUTM2DQ5VT03 806 aaPredicted RBP30.97■■■□□ 2.55
MAP1LC3A-202ENST00000374837 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.97■■■□□ 2.55
MAP1LC3A-202ENST00000374837 PPP1R15AO75807 674 aaPredicted RBP30.95■■■□□ 2.55
MAP1LC3A-202ENST00000374837 UBAP1LF5GYI3 381 aa30.93■■■□□ 2.54
MAP1LC3A-202ENST00000374837 CCDC144AA2RUR9 1427 aa30.92■■■□□ 2.54
MAP1LC3A-202ENST00000374837 MYO5BQ9ULV0 1848 aa30.92■■■□□ 2.54
MAP1LC3A-202ENST00000374837 IQGAP1P46940 1657 aa30.92■■■□□ 2.54
MAP1LC3A-202ENST00000374837 BCANQ96GW7 911 aa30.91■■■□□ 2.54
MAP1LC3A-202ENST00000374837 SENP3Q9H4L4 574 aaPredicted RBP30.91■■■□□ 2.54
MAP1LC3A-202ENST00000374837 SLC26A8Q96RN1 970 aa30.89■■■□□ 2.54
MAP1LC3A-202ENST00000374837 PLEKHG1Q9ULL1 1385 aa30.89■■■□□ 2.54
MAP1LC3A-202ENST00000374837 ANKRD30BQ9BXX2 1392 aa30.86■■■□□ 2.53
MAP1LC3A-202ENST00000374837 RPGRIP1LQ68CZ1 1315 aa30.82■■■□□ 2.52
MAP1LC3A-202ENST00000374837 RGL3Q3MIN7 710 aa30.82■■■□□ 2.52
MAP1LC3A-202ENST00000374837 SPATA31E1Q6ZUB1 1445 aa30.8■■■□□ 2.52
MAP1LC3A-202ENST00000374837 KIF1BO60333 1816 aa30.8■■■□□ 2.52
MAP1LC3A-202ENST00000374837 TBX22Q9Y458 520 aa30.79■■■□□ 2.52
MAP1LC3A-202ENST00000374837 NEXMIFQ5QGS0 1516 aa30.78■■■□□ 2.52
MAP1LC3A-202ENST00000374837 VGFO15240 615 aaPredicted RBP30.76■■■□□ 2.51
MAP1LC3A-202ENST00000374837 ADAMTS13Q76LX8 1427 aa30.75■■■□□ 2.51
MAP1LC3A-202ENST00000374837 KCNA6P17658 529 aa30.74■■■□□ 2.51
MAP1LC3A-202ENST00000374837 CPS1P31327 1500 aa30.73■■■□□ 2.51
MAP1LC3A-202ENST00000374837 SCAF1Q9H7N4 1312 aaKnown RBP30.7■■■□□ 2.5
MAP1LC3A-202ENST00000374837 ADGRF5Q8IZF2 1346 aa30.66■■■□□ 2.5
MAP1LC3A-202ENST00000374837 STRCP1A6NGW2 1772 aa30.65■■■□□ 2.5
MAP1LC3A-202ENST00000374837 PIP4K2BP78356 416 aa30.65■■■□□ 2.5
MAP1LC3A-202ENST00000374837 SETBP1Q9Y6X0 1596 aa30.65■■■□□ 2.5
MAP1LC3A-202ENST00000374837 LRRC7Q96NW7 1537 aa30.63■■■□□ 2.49
MAP1LC3A-202ENST00000374837 HSPA1LP34931 641 aa30.63■■■□□ 2.49
MAP1LC3A-202ENST00000374837 PCGF6Q9BYE7 350 aa30.62■■■□□ 2.49
MAP1LC3A-202ENST00000374837 DHX57Q6P158 1386 aaKnown RBP30.62■■■□□ 2.49
MAP1LC3A-202ENST00000374837 PIK3R4Q99570 1358 aa30.62■■■□□ 2.49
MAP1LC3A-202ENST00000374837 DIP2AQ14689 1571 aa30.62■■■□□ 2.49
MAP1LC3A-202ENST00000374837 NRXN3Q9Y4C0 1643 aa30.62■■■□□ 2.49
MAP1LC3A-202ENST00000374837 PROSER2Q86WR7 435 aaPredicted RBP30.6■■■□□ 2.49
MAP1LC3A-202ENST00000374837 METP08581 1390 aa30.59■■■□□ 2.49
MAP1LC3A-202ENST00000374837 TOM1O60784 492 aa30.59■■■□□ 2.49
MAP1LC3A-202ENST00000374837 PPLO60437 1756 aa30.59■■■□□ 2.49
MAP1LC3A-202ENST00000374837 AMOTL2Q9Y2J4 779 aa30.58■■■□□ 2.49
MAP1LC3A-202ENST00000374837 PTPRUQ92729 1446 aa30.57■■■□□ 2.48
MAP1LC3A-202ENST00000374837 RBM33Q96EV2 1170 aaKnown RBP30.56■■■□□ 2.48
MAP1LC3A-202ENST00000374837 NWD1Q149M9 1564 aa30.55■■■□□ 2.48
MAP1LC3A-202ENST00000374837 TMEM94Q12767 1356 aa30.54■■■□□ 2.48
MAP1LC3A-202ENST00000374837 MED1Q15648 1581 aaPredicted RBP30.54■■■□□ 2.48
MAP1LC3A-202ENST00000374837 NKTRP30414 1462 aaKnown RBP30.53■■■□□ 2.48
MAP1LC3A-202ENST00000374837 DCAF11Q8TEB1 546 aa30.53■■■□□ 2.48
MAP1LC3A-202ENST00000374837 SIN3AQ96ST3 1273 aa30.53■■■□□ 2.48
MAP1LC3A-202ENST00000374837 KDM2AQ9Y2K7 1162 aa30.52■■■□□ 2.48
MAP1LC3A-202ENST00000374837 ALKQ9UM73 1620 aa30.51■■■□□ 2.48
MAP1LC3A-202ENST00000374837 CHD2O14647 1828 aaKnown RBP30.51■■■□□ 2.47
MAP1LC3A-202ENST00000374837 IFT172Q9UG01 1749 aa30.5■■■□□ 2.47
MAP1LC3A-202ENST00000374837 PIK3C2GO75747 1445 aa30.48■■■□□ 2.47
MAP1LC3A-202ENST00000374837 MYOM2P54296 1465 aa30.48■■■□□ 2.47
MAP1LC3A-202ENST00000374837 NRXN1Q9ULB1 1477 aa30.47■■■□□ 2.47
MAP1LC3A-202ENST00000374837 STAC3Q96MF2 364 aa30.47■■■□□ 2.47
MAP1LC3A-202ENST00000374837 C14orf93Q9H972 538 aaKnown RBP30.46■■■□□ 2.47
MAP1LC3A-202ENST00000374837 NEUROD1Q13562 356 aa30.45■■■□□ 2.47
MAP1LC3A-202ENST00000374837 CFAP70Q5T0N1 1121 aa30.44■■■□□ 2.46
MAP1LC3A-202ENST00000374837 PHF23Q9BUL5 403 aaPredicted RBP30.43■■■□□ 2.46
MAP1LC3A-202ENST00000374837 TMEM132EQ6IEE7 984 aa30.42■■■□□ 2.46
MAP1LC3A-202ENST00000374837 SETD1AO15047 1707 aaKnown RBP30.4■■■□□ 2.46
MAP1LC3A-202ENST00000374837 NCOA3Q9Y6Q9 1424 aa30.39■■■□□ 2.46
MAP1LC3A-202ENST00000374837 XRN1Q8IZH2 1706 aaKnown RBP30.39■■■□□ 2.45
MAP1LC3A-202ENST00000374837 C14orf37Q86TY3 774 aa30.38■■■□□ 2.45
MAP1LC3A-202ENST00000374837 L3MBTL2Q969R5 705 aa30.37■■■□□ 2.45
MAP1LC3A-202ENST00000374837 XIRP1Q702N8 1843 aaKnown RBP30.37■■■□□ 2.45
MAP1LC3A-202ENST00000374837 STK26Q9P289 416 aa30.36■■■□□ 2.45
MAP1LC3A-202ENST00000374837 MSH6P52701 1360 aa30.36■■■□□ 2.45
MAP1LC3A-202ENST00000374837 ROBO2Q9HCK4 1378 aa30.35■■■□□ 2.45
MAP1LC3A-202ENST00000374837 LRPPRCP42704 1394 aaKnown RBP30.34■■■□□ 2.45
MAP1LC3A-202ENST00000374837 C19orf44Q9H6X5 657 aa30.34■■■□□ 2.45
MAP1LC3A-202ENST00000374837 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
MAP1LC3A-202ENST00000374837 PRAG1Q86YV5 1406 aa30.31■■■□□ 2.44
MAP1LC3A-202ENST00000374837 ABCC11Q96J66 1382 aa30.31■■■□□ 2.44
MAP1LC3A-202ENST00000374837 PTCH1Q13635 1447 aa30.3■■■□□ 2.44
MAP1LC3A-202ENST00000374837 YTHDC2Q9H6S0 1430 aaKnown RBP30.3■■■□□ 2.44
MAP1LC3A-202ENST00000374837 TECPR2O15040 1411 aa30.26■■■□□ 2.43
MAP1LC3A-202ENST00000374837 ATF3P18847 181 aa30.25■■■□□ 2.43
MAP1LC3A-202ENST00000374837 WAPLQ7Z5K2 1190 aa30.25■■■□□ 2.43
MAP1LC3A-202ENST00000374837 CADPS2Q86UW7 1296 aa30.24■■■□□ 2.43
MAP1LC3A-202ENST00000374837 SIRT1Q96EB6 747 aa30.24■■■□□ 2.43
MAP1LC3A-202ENST00000374837 SLAIN2Q9P270 581 aa30.24■■■□□ 2.43
MAP1LC3A-202ENST00000374837 LAMC1P11047 1609 aa30.23■■■□□ 2.43
MAP1LC3A-202ENST00000374837 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
MAP1LC3A-202ENST00000374837 ADGRB1O14514 1584 aa30.2■■■□□ 2.43
MAP1LC3A-202ENST00000374837 PLEKHH1Q9ULM0 1364 aa30.19■■■□□ 2.42
MAP1LC3A-202ENST00000374837 NBPF1Q3BBV0 1214 aa30.18■■■□□ 2.42
MAP1LC3A-202ENST00000374837 TRAK1Q9UPV9 953 aa30.18■■■□□ 2.42
MAP1LC3A-202ENST00000374837 FAM135BQ49AJ0 1406 aa30.18■■■□□ 2.42
MAP1LC3A-202ENST00000374837 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.17■■■□□ 2.42
MAP1LC3A-202ENST00000374837 TONSLQ96HA7 1378 aa30.16■■■□□ 2.42
MAP1LC3A-202ENST00000374837 DCCP43146 1447 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms