RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 PPP1R15BQ5SWA1 713 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 P3H3Q8IVL6 736 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 PRR14Q9BWN1 585 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 CRISPLD2Q9H0B8 497 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 RIMBP3CA6NJZ7 1639 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 RIMBP3BA6NNM3 1639 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 RIMBP3Q9UFD9 1639 aa3.45□□□□□ -1.86
UBE2A-203ENST00000371569 PKDCCQ504Y2 493 aa3.44□□□□□ -1.86
UBE2A-203ENST00000371569 MYT1Q01538 1121 aa3.44□□□□□ -1.86
UBE2A-203ENST00000371569 NKX1-1Q15270 411 aaPredicted RBP3.44□□□□□ -1.86
UBE2A-203ENST00000371569 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
UBE2A-203ENST00000371569 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
UBE2A-203ENST00000371569 PPP1R37O75864 691 aa3.43□□□□□ -1.86
UBE2A-203ENST00000371569 MAP3K9P80192 1104 aa3.43□□□□□ -1.86
UBE2A-203ENST00000371569 PPP1R18Q6NYC8 613 aa3.43□□□□□ -1.86
UBE2A-203ENST00000371569 CC2D2AQ9P2K1 1620 aa3.43□□□□□ -1.86
UBE2A-203ENST00000371569 CRIPAKQ8N1N5 446 aa3.43□□□□□ -1.86
UBE2A-203ENST00000371569 CERKQ8TCT0 537 aa3.43□□□□□ -1.86
UBE2A-203ENST00000371569 HECW2Q9P2P5 1572 aa3.42□□□□□ -1.86
UBE2A-203ENST00000371569 HDGFP51858 240 aaKnown RBP3.42□□□□□ -1.86
UBE2A-203ENST00000371569 C14orf37Q86TY3 774 aa3.42□□□□□ -1.86
UBE2A-203ENST00000371569 SLC4A3P48751 1232 aa3.42□□□□□ -1.86
UBE2A-203ENST00000371569 WFS1O76024 890 aa3.41□□□□□ -1.86
UBE2A-203ENST00000371569 MFSD10Q14728 455 aa3.41□□□□□ -1.86
UBE2A-203ENST00000371569 ZNF598Q86UK7 904 aaKnown RBP3.41□□□□□ -1.86
UBE2A-203ENST00000371569 UPF1Q92900 1129 aaKnown RBP eCLIP3.41□□□□□ -1.86
UBE2A-203ENST00000371569 MTRQ99707 1265 aa3.41□□□□□ -1.86
UBE2A-203ENST00000371569 PCDHGA10Q9Y5H3 936 aa3.41□□□□□ -1.86
UBE2A-203ENST00000371569 COL9A1P20849 921 aa3.4□□□□□ -1.86
UBE2A-203ENST00000371569 CTC1Q2NKJ3 1217 aa3.4□□□□□ -1.86
UBE2A-203ENST00000371569 C6orf132Q5T0Z8 1188 aa3.4□□□□□ -1.87
UBE2A-203ENST00000371569 SLC19A1P41440 591 aa3.4□□□□□ -1.87
UBE2A-203ENST00000371569 PROX2Q3B8N5 592 aa3.4□□□□□ -1.87
UBE2A-203ENST00000371569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.4□□□□□ -1.87
UBE2A-203ENST00000371569 SMCPP49901 116 aaPredicted RBP3.39□□□□□ -1.87
UBE2A-203ENST00000371569 NBPF26B4DH59 902 aa3.38□□□□□ -1.87
UBE2A-203ENST00000371569 ANKLE1Q8NAG6 615 aa3.38□□□□□ -1.87
UBE2A-203ENST00000371569 WDR70Q9NW82 654 aa3.38□□□□□ -1.87
UBE2A-203ENST00000371569 RBM27Q9P2N5 1060 aaKnown RBP3.38□□□□□ -1.87
UBE2A-203ENST00000371569 AVPP01185 164 aa3.37□□□□□ -1.87
UBE2A-203ENST00000371569 SPRYD7Q5W111 196 aa3.37□□□□□ -1.87
UBE2A-203ENST00000371569 SLF2Q8IX21 1173 aa3.37□□□□□ -1.87
UBE2A-203ENST00000371569 DDX27Q96GQ7 796 aaKnown RBP3.37□□□□□ -1.87
UBE2A-203ENST00000371569 SHROOM4Q9ULL8 1493 aa3.36□□□□□ -1.87
UBE2A-203ENST00000371569 KIFC2Q96AC6 838 aa3.36□□□□□ -1.87
UBE2A-203ENST00000371569 SENP2Q9HC62 589 aa3.36□□□□□ -1.87
UBE2A-203ENST00000371569 BRPF1P55201 1214 aaPredicted RBP3.36□□□□□ -1.87
UBE2A-203ENST00000371569 NPAS3Q8IXF0 933 aa3.36□□□□□ -1.87
UBE2A-203ENST00000371569 ARHGEF1Q92888 912 aaKnown RBP3.36□□□□□ -1.87
UBE2A-203ENST00000371569 RB1CC1Q8TDY2 1594 aa3.35□□□□□ -1.87
UBE2A-203ENST00000371569 SPDYE16A6NNV3 312 aaPredicted RBP3.35□□□□□ -1.87
UBE2A-203ENST00000371569 RPIAP49247 311 aa3.35□□□□□ -1.87
UBE2A-203ENST00000371569 AAASQ9NRG9 546 aa3.35□□□□□ -1.87
UBE2A-203ENST00000371569 GDF9O60383 454 aa3.34□□□□□ -1.87
UBE2A-203ENST00000371569 TRIM67Q6ZTA4 783 aa3.34□□□□□ -1.87
UBE2A-203ENST00000371569 KCNV2Q8TDN2 545 aa3.34□□□□□ -1.87
UBE2A-203ENST00000371569 SEPT9Q9UHD8 586 aaPredicted RBP3.34□□□□□ -1.87
UBE2A-203ENST00000371569 FAM187AA6NFU0 413 aa3.34□□□□□ -1.88
UBE2A-203ENST00000371569 ZPR1O75312 459 aa3.34□□□□□ -1.88
UBE2A-203ENST00000371569 PRSS12P56730 875 aa3.34□□□□□ -1.88
UBE2A-203ENST00000371569 SLC16A10Q8TF71 515 aa3.34□□□□□ -1.88
UBE2A-203ENST00000371569 BAZ1AQ9NRL2 1556 aaPredicted RBP3.33□□□□□ -1.88
UBE2A-203ENST00000371569 NFX1Q12986 1120 aaKnown RBP3.33□□□□□ -1.88
UBE2A-203ENST00000371569 KDM6BO15054 1643 aa3.33□□□□□ -1.88
UBE2A-203ENST00000371569 ZNF697Q5TEC3 545 aa3.33□□□□□ -1.88
UBE2A-203ENST00000371569 SAMD7Q7Z3H4 446 aa3.33□□□□□ -1.88
UBE2A-203ENST00000371569 ZC3H15Q8WU90 426 aaKnown RBP3.33□□□□□ -1.88
UBE2A-203ENST00000371569 TERTO14746 1132 aaKnown RBP3.32□□□□□ -1.88
UBE2A-203ENST00000371569 EN1Q05925 392 aaPredicted RBP3.32□□□□□ -1.88
UBE2A-203ENST00000371569 TATDN2Q93075 761 aa3.32□□□□□ -1.88
UBE2A-203ENST00000371569 CAMK2BQ13554 666 aa3.32□□□□□ -1.88
UBE2A-203ENST00000371569 NCKAP5LQ9HCH0 1330 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 ARHGEF11O15085 1522 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 SYNJ2O15056 1496 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 NEUROD2Q15784 382 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 SMYD5Q6GMV2 418 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 TESPA1A2RU30 521 aaPredicted RBP3.31□□□□□ -1.88
UBE2A-203ENST00000371569 ZNF516Q92618 1163 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 LARP6Q9BRS8 491 aaKnown RBP3.31□□□□□ -1.88
UBE2A-203ENST00000371569 NISCHQ9Y2I1 1504 aa3.31□□□□□ -1.88
UBE2A-203ENST00000371569 ERCC6Q03468 1493 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 TSKSQ9UJT2 592 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 C11orf95C9JLR9 678 aaPredicted RBP3.3□□□□□ -1.88
UBE2A-203ENST00000371569 RNF223E7ERA6 249 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 AXIN1O15169 862 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 APLP1P51693 650 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 E2F4Q16254 413 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 KMT5BQ4FZB7 885 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 CADPS2Q86UW7 1296 aa3.3□□□□□ -1.88
UBE2A-203ENST00000371569 ZMYND10O75800 440 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 KCNMA1Q12791 1236 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 CDCA7LQ96GN5 454 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 ARIH1Q9Y4X5 557 aaPredicted RBP3.29□□□□□ -1.88
UBE2A-203ENST00000371569 NR1I2O75469 434 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 ZSCAN1Q8NBB4 408 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 PNMA3Q9UL41 463 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 PCDHB3Q9Y5E6 796 aa3.29□□□□□ -1.88
UBE2A-203ENST00000371569 POTECB2RU33 542 aa3.28□□□□□ -1.88
UBE2A-203ENST00000371569 ADH1BP00325 375 aa3.28□□□□□ -1.88
UBE2A-203ENST00000371569 IGHA1P01876 353 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms