RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 HFM1A2PYH4 1435 aa25.45■■□□□ 1.66
PDLIM7-201ENST00000355572 CLTCL1P53675 1640 aa25.45■■□□□ 1.66
PDLIM7-201ENST00000355572 CHD2O14647 1828 aaKnown RBP25.44■■□□□ 1.66
PDLIM7-201ENST00000355572 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
PDLIM7-201ENST00000355572 PIP4K2BP78356 416 aa25.41■■□□□ 1.66
PDLIM7-201ENST00000355572 NUTM2DQ5VT03 806 aaPredicted RBP25.41■■□□□ 1.66
PDLIM7-201ENST00000355572 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
PDLIM7-201ENST00000355572 PLEKHG1Q9ULL1 1385 aa25.39■■□□□ 1.65
PDLIM7-201ENST00000355572 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
PDLIM7-201ENST00000355572 TRPM2O94759 1503 aa25.37■■□□□ 1.65
PDLIM7-201ENST00000355572 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
PDLIM7-201ENST00000355572 RBM33Q96EV2 1170 aaKnown RBP25.36■■□□□ 1.65
PDLIM7-201ENST00000355572 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
PDLIM7-201ENST00000355572 TOM1O60784 492 aa25.34■■□□□ 1.65
PDLIM7-201ENST00000355572 HSPA1LP34931 641 aa25.34■■□□□ 1.65
PDLIM7-201ENST00000355572 KIF1BO60333 1816 aa25.34■■□□□ 1.65
PDLIM7-201ENST00000355572 TMEM94Q12767 1356 aa25.32■■□□□ 1.64
PDLIM7-201ENST00000355572 KCNA6P17658 529 aa25.32■■□□□ 1.64
PDLIM7-201ENST00000355572 NEXMIFQ5QGS0 1516 aa25.3■■□□□ 1.64
PDLIM7-201ENST00000355572 NKTRP30414 1462 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-201ENST00000355572 PPP1R15AO75807 674 aaPredicted RBP25.29■■□□□ 1.64
PDLIM7-201ENST00000355572 BCANQ96GW7 911 aa25.29■■□□□ 1.64
PDLIM7-201ENST00000355572 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
PDLIM7-201ENST00000355572 DIP2AQ14689 1571 aa25.27■■□□□ 1.64
PDLIM7-201ENST00000355572 DISP3Q9P2K9 1392 aa25.26■■□□□ 1.63
PDLIM7-201ENST00000355572 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
PDLIM7-201ENST00000355572 SETBP1Q9Y6X0 1596 aa25.24■■□□□ 1.63
PDLIM7-201ENST00000355572 FOXD1Q16676 465 aa25.24■■□□□ 1.63
PDLIM7-201ENST00000355572 PROSER2Q86WR7 435 aaPredicted RBP25.24■■□□□ 1.63
PDLIM7-201ENST00000355572 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM7-201ENST00000355572 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
PDLIM7-201ENST00000355572 ILDR2Q71H61 639 aa25.22■■□□□ 1.63
PDLIM7-201ENST00000355572 SETD1AO15047 1707 aaKnown RBP25.22■■□□□ 1.63
PDLIM7-201ENST00000355572 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
PDLIM7-201ENST00000355572 ROBO1Q9Y6N7 1651 aa25.21■■□□□ 1.63
PDLIM7-201ENST00000355572 PPLO60437 1756 aa25.21■■□□□ 1.63
PDLIM7-201ENST00000355572 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
PDLIM7-201ENST00000355572 MED1Q15648 1581 aaPredicted RBP25.19■■□□□ 1.62
PDLIM7-201ENST00000355572 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
PDLIM7-201ENST00000355572 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
PDLIM7-201ENST00000355572 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
PDLIM7-201ENST00000355572 METP08581 1390 aa25.14■■□□□ 1.61
PDLIM7-201ENST00000355572 IFT172Q9UG01 1749 aa25.13■■□□□ 1.61
PDLIM7-201ENST00000355572 PIK3R4Q99570 1358 aa25.12■■□□□ 1.61
PDLIM7-201ENST00000355572 FAM135BQ49AJ0 1406 aa25.11■■□□□ 1.61
PDLIM7-201ENST00000355572 SETD5Q9C0A6 1442 aa25.1■■□□□ 1.61
PDLIM7-201ENST00000355572 MPHOSPH9Q99550 1183 aa25.09■■□□□ 1.61
PDLIM7-201ENST00000355572 AMOTL2Q9Y2J4 779 aa25.09■■□□□ 1.61
PDLIM7-201ENST00000355572 MSH6P52701 1360 aa25.08■■□□□ 1.61
PDLIM7-201ENST00000355572 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
PDLIM7-201ENST00000355572 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
PDLIM7-201ENST00000355572 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
PDLIM7-201ENST00000355572 PHLPP1O60346 1717 aa25.04■■□□□ 1.6
PDLIM7-201ENST00000355572 NCOA3Q9Y6Q9 1424 aa25.03■■□□□ 1.6
PDLIM7-201ENST00000355572 SLAIN2Q9P270 581 aa25.01■■□□□ 1.59
PDLIM7-201ENST00000355572 CCDC144AA2RUR9 1427 aa25■■□□□ 1.59
PDLIM7-201ENST00000355572 COL16A1Q07092 1604 aaPredicted RBP25■■□□□ 1.59
PDLIM7-201ENST00000355572 ASXL1Q8IXJ9 1541 aa24.97■■□□□ 1.59
PDLIM7-201ENST00000355572 ADGRF5Q8IZF2 1346 aa24.97■■□□□ 1.59
PDLIM7-201ENST00000355572 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
PDLIM7-201ENST00000355572 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
PDLIM7-201ENST00000355572 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
PDLIM7-201ENST00000355572 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
PDLIM7-201ENST00000355572 ROBO2Q9HCK4 1378 aa24.93■■□□□ 1.58
PDLIM7-201ENST00000355572 VGFO15240 615 aaPredicted RBP24.93■■□□□ 1.58
PDLIM7-201ENST00000355572 AHDC1Q5TGY3 1603 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-201ENST00000355572 MST1RQ04912 1400 aa24.92■■□□□ 1.58
PDLIM7-201ENST00000355572 ADGRL3Q9HAR2 1447 aa24.91■■□□□ 1.58
PDLIM7-201ENST00000355572 DCCP43146 1447 aa24.89■■□□□ 1.58
PDLIM7-201ENST00000355572 PTCH1Q13635 1447 aa24.89■■□□□ 1.58
PDLIM7-201ENST00000355572 PRAG1Q86YV5 1406 aa24.89■■□□□ 1.58
PDLIM7-201ENST00000355572 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
PDLIM7-201ENST00000355572 CADPS2Q86UW7 1296 aa24.88■■□□□ 1.57
PDLIM7-201ENST00000355572 ATF3P18847 181 aa24.87■■□□□ 1.57
PDLIM7-201ENST00000355572 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
PDLIM7-201ENST00000355572 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
PDLIM7-201ENST00000355572 BRINP3Q76B58 766 aa24.86■■□□□ 1.57
PDLIM7-201ENST00000355572 KNDC1Q76NI1 1749 aa24.86■■□□□ 1.57
PDLIM7-201ENST00000355572 ANKRD30BQ9BXX2 1392 aa24.83■■□□□ 1.57
PDLIM7-201ENST00000355572 SHPRHQ149N8 1683 aa24.83■■□□□ 1.57
PDLIM7-201ENST00000355572 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.56
PDLIM7-201ENST00000355572 SOCS7O14512 581 aa24.82■■□□□ 1.56
PDLIM7-201ENST00000355572 LRP6O75581 1613 aa24.82■■□□□ 1.56
PDLIM7-201ENST00000355572 DDX17Q92841 729 aaKnown RBP24.81■■□□□ 1.56
PDLIM7-201ENST00000355572 TMEM132EQ6IEE7 984 aa24.8■■□□□ 1.56
PDLIM7-201ENST00000355572 MYOM2P54296 1465 aa24.78■■□□□ 1.56
PDLIM7-201ENST00000355572 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
PDLIM7-201ENST00000355572 JCADQ9P266 1359 aa24.78■■□□□ 1.56
PDLIM7-201ENST00000355572 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
PDLIM7-201ENST00000355572 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
PDLIM7-201ENST00000355572 TECPR2O15040 1411 aa24.77■■□□□ 1.56
PDLIM7-201ENST00000355572 LAMC1P11047 1609 aa24.76■■□□□ 1.55
PDLIM7-201ENST00000355572 STK26Q9P289 416 aa24.75■■□□□ 1.55
PDLIM7-201ENST00000355572 ACIN1Q9UKV3 1341 aaKnown RBP24.75■■□□□ 1.55
PDLIM7-201ENST00000355572 LRPPRCP42704 1394 aaKnown RBP24.75■■□□□ 1.55
PDLIM7-201ENST00000355572 WAPLQ7Z5K2 1190 aa24.74■■□□□ 1.55
PDLIM7-201ENST00000355572 CDC42BPGQ6DT37 1551 aa24.74■■□□□ 1.55
PDLIM7-201ENST00000355572 YTHDC2Q9H6S0 1430 aaKnown RBP24.72■■□□□ 1.55
PDLIM7-201ENST00000355572 CFAP70Q5T0N1 1121 aa24.72■■□□□ 1.55
PDLIM7-201ENST00000355572 RGPD8O14715 1765 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms