RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.33■■■□□ 2.13
CCDC78-202ENST00000345165 STRCP1A6NGW2 1772 aa28.32■■■□□ 2.12
CCDC78-202ENST00000345165 TRIM52Q96A61 297 aa28.32■■■□□ 2.12
CCDC78-202ENST00000345165 KIF1BO60333 1816 aa28.3■■■□□ 2.12
CCDC78-202ENST00000345165 SLC4A1APQ9BWU0 796 aaKnown RBP28.3■■■□□ 2.12
CCDC78-202ENST00000345165 DIP2AQ14689 1571 aa28.29■■■□□ 2.12
CCDC78-202ENST00000345165 NWD1Q149M9 1564 aa28.27■■■□□ 2.12
CCDC78-202ENST00000345165 LRRC7Q96NW7 1537 aa28.24■■■□□ 2.11
CCDC78-202ENST00000345165 NKTRP30414 1462 aaKnown RBP28.22■■■□□ 2.11
CCDC78-202ENST00000345165 PPP1R15AO75807 674 aaPredicted RBP28.21■■■□□ 2.11
CCDC78-202ENST00000345165 CHGAP10645 457 aaKnown RBP28.21■■■□□ 2.11
CCDC78-202ENST00000345165 HRCP23327 699 aa28.21■■■□□ 2.11
CCDC78-202ENST00000345165 RAB3GAP2Q9H2M9 1393 aa28.2■■■□□ 2.1
CCDC78-202ENST00000345165 SETBP1Q9Y6X0 1596 aa28.2■■■□□ 2.1
CCDC78-202ENST00000345165 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
CCDC78-202ENST00000345165 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
CCDC78-202ENST00000345165 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
CCDC78-202ENST00000345165 MPHOSPH9Q99550 1183 aa28.18■■■□□ 2.1
CCDC78-202ENST00000345165 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
CCDC78-202ENST00000345165 KCNA6P17658 529 aa28.17■■■□□ 2.1
CCDC78-202ENST00000345165 ADAMTS13Q76LX8 1427 aa28.17■■■□□ 2.1
CCDC78-202ENST00000345165 XIRP1Q702N8 1843 aaKnown RBP28.15■■■□□ 2.1
CCDC78-202ENST00000345165 SLC26A8Q96RN1 970 aa28.14■■■□□ 2.1
CCDC78-202ENST00000345165 CCDC144AA2RUR9 1427 aa28.14■■■□□ 2.1
CCDC78-202ENST00000345165 NRXN3Q9Y4C0 1643 aa28.14■■■□□ 2.09
CCDC78-202ENST00000345165 RPGRIP1LQ68CZ1 1315 aa28.13■■■□□ 2.09
CCDC78-202ENST00000345165 UBAP1LF5GYI3 381 aa28.1■■■□□ 2.09
CCDC78-202ENST00000345165 TOM1O60784 492 aa28.1■■■□□ 2.09
CCDC78-202ENST00000345165 PPLO60437 1756 aa28.09■■■□□ 2.09
CCDC78-202ENST00000345165 ALKQ9UM73 1620 aa28.09■■■□□ 2.09
CCDC78-202ENST00000345165 ZNF326Q5BKZ1 582 aaKnown RBP28.08■■■□□ 2.09
CCDC78-202ENST00000345165 BCANQ96GW7 911 aa28.08■■■□□ 2.09
CCDC78-202ENST00000345165 NCOA3Q9Y6Q9 1424 aa28.07■■■□□ 2.08
CCDC78-202ENST00000345165 SPATA31E1Q6ZUB1 1445 aa28.06■■■□□ 2.08
CCDC78-202ENST00000345165 IFT172Q9UG01 1749 aa28.04■■■□□ 2.08
CCDC78-202ENST00000345165 VGFO15240 615 aaPredicted RBP28.03■■■□□ 2.08
CCDC78-202ENST00000345165 XRN1Q8IZH2 1706 aaKnown RBP28.03■■■□□ 2.08
CCDC78-202ENST00000345165 TMEM94Q12767 1356 aa28.02■■■□□ 2.08
CCDC78-202ENST00000345165 FOXD1Q16676 465 aa28.02■■■□□ 2.08
CCDC78-202ENST00000345165 NUTM2DQ5VT03 806 aaPredicted RBP28■■■□□ 2.07
CCDC78-202ENST00000345165 SETD1AO15047 1707 aaKnown RBP28■■■□□ 2.07
CCDC78-202ENST00000345165 ANKRD30BQ9BXX2 1392 aa27.98■■■□□ 2.07
CCDC78-202ENST00000345165 PROSER2Q86WR7 435 aaPredicted RBP27.97■■■□□ 2.07
CCDC78-202ENST00000345165 PRAG1Q86YV5 1406 aa27.97■■■□□ 2.07
CCDC78-202ENST00000345165 PTPRUQ92729 1446 aa27.93■■■□□ 2.06
CCDC78-202ENST00000345165 MSH6P52701 1360 aa27.91■■■□□ 2.06
CCDC78-202ENST00000345165 METP08581 1390 aa27.9■■■□□ 2.06
CCDC78-202ENST00000345165 MYOM2P54296 1465 aa27.89■■■□□ 2.05
CCDC78-202ENST00000345165 AMOTL2Q9Y2J4 779 aa27.88■■■□□ 2.05
CCDC78-202ENST00000345165 DCCP43146 1447 aa27.87■■■□□ 2.05
CCDC78-202ENST00000345165 PTCH1Q13635 1447 aa27.87■■■□□ 2.05
CCDC78-202ENST00000345165 FAM135BQ49AJ0 1406 aa27.87■■■□□ 2.05
CCDC78-202ENST00000345165 NRXN1Q9ULB1 1477 aa27.86■■■□□ 2.05
CCDC78-202ENST00000345165 PIK3C2GO75747 1445 aa27.85■■■□□ 2.05
CCDC78-202ENST00000345165 PIP4K2BP78356 416 aa27.85■■■□□ 2.05
CCDC78-202ENST00000345165 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
CCDC78-202ENST00000345165 LAMC1P11047 1609 aa27.84■■■□□ 2.05
CCDC78-202ENST00000345165 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.84■■■□□ 2.05
CCDC78-202ENST00000345165 C19orf44Q9H6X5 657 aa27.81■■■□□ 2.04
CCDC78-202ENST00000345165 SCAF1Q9H7N4 1312 aaKnown RBP27.81■■■□□ 2.04
CCDC78-202ENST00000345165 RGL3Q3MIN7 710 aa27.8■■■□□ 2.04
CCDC78-202ENST00000345165 STAC3Q96MF2 364 aa27.8■■■□□ 2.04
CCDC78-202ENST00000345165 ADGRF5Q8IZF2 1346 aa27.79■■■□□ 2.04
CCDC78-202ENST00000345165 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
CCDC78-202ENST00000345165 TECPR2O15040 1411 aa27.77■■■□□ 2.04
CCDC78-202ENST00000345165 CADPS2Q86UW7 1296 aa27.77■■■□□ 2.04
CCDC78-202ENST00000345165 KNDC1Q76NI1 1749 aa27.77■■■□□ 2.04
CCDC78-202ENST00000345165 ADGRL3Q9HAR2 1447 aa27.76■■■□□ 2.04
CCDC78-202ENST00000345165 HSPA1LP34931 641 aa27.76■■■□□ 2.03
CCDC78-202ENST00000345165 RBM33Q96EV2 1170 aaKnown RBP27.75■■■□□ 2.03
CCDC78-202ENST00000345165 NALCNQ8IZF0 1738 aa27.74■■■□□ 2.03
CCDC78-202ENST00000345165 SLAIN2Q9P270 581 aa27.73■■■□□ 2.03
CCDC78-202ENST00000345165 ASXL1Q8IXJ9 1541 aa27.72■■■□□ 2.03
CCDC78-202ENST00000345165 C14orf37Q86TY3 774 aa27.71■■■□□ 2.03
CCDC78-202ENST00000345165 ATF3P18847 181 aa27.7■■■□□ 2.02
CCDC78-202ENST00000345165 LRPPRCP42704 1394 aaKnown RBP27.7■■■□□ 2.02
CCDC78-202ENST00000345165 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
CCDC78-202ENST00000345165 ROBO2Q9HCK4 1378 aa27.69■■■□□ 2.02
CCDC78-202ENST00000345165 C14orf93Q9H972 538 aaKnown RBP27.67■■■□□ 2.02
CCDC78-202ENST00000345165 AHDC1Q5TGY3 1603 aaPredicted RBP27.64■■■□□ 2.02
CCDC78-202ENST00000345165 MST1RQ04912 1400 aa27.64■■■□□ 2.02
CCDC78-202ENST00000345165 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
CCDC78-202ENST00000345165 YTHDC2Q9H6S0 1430 aaKnown RBP27.63■■■□□ 2.01
CCDC78-202ENST00000345165 CDC42BPGQ6DT37 1551 aa27.63■■■□□ 2.01
CCDC78-202ENST00000345165 SIRT1Q96EB6 747 aa27.62■■■□□ 2.01
CCDC78-202ENST00000345165 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
CCDC78-202ENST00000345165 PHLPP1O60346 1717 aa27.61■■■□□ 2.01
CCDC78-202ENST00000345165 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
CCDC78-202ENST00000345165 DLC1Q96QB1 1528 aa27.59■■■□□ 2.01
CCDC78-202ENST00000345165 COL16A1Q07092 1604 aaPredicted RBP27.58■■■□□ 2.01
CCDC78-202ENST00000345165 MED1Q15648 1581 aaPredicted RBP27.57■■■□□ 2
CCDC78-202ENST00000345165 KIAA1210Q9ULL0 1709 aa27.57■■■□□ 2
CCDC78-202ENST00000345165 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
CCDC78-202ENST00000345165 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
CCDC78-202ENST00000345165 CFAP70Q5T0N1 1121 aa27.54■■■□□ 2
CCDC78-202ENST00000345165 C1orf167Q5SNV9 1468 aa27.52■■■□□ 2
CCDC78-202ENST00000345165 TMEM132EQ6IEE7 984 aa27.52■■■□□ 2
CCDC78-202ENST00000345165 BRINP3Q76B58 766 aa27.52■■■□□ 2
CCDC78-202ENST00000345165 DISP3Q9P2K9 1392 aa27.5■■□□□ 1.99
CCDC78-202ENST00000345165 JCADQ9P266 1359 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms