RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
PACRG-201ENST00000337019 LTKP29376 864 aa12.44□□□□□ -0.42
PACRG-201ENST00000337019 RIMS2Q9UQ26 1411 aa12.44□□□□□ -0.42
PACRG-201ENST00000337019 SPHKAPQ2M3C7 1700 aa12.43□□□□□ -0.42
PACRG-201ENST00000337019 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
PACRG-201ENST00000337019 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
PACRG-201ENST00000337019 TRPM2O94759 1503 aa12.42□□□□□ -0.42
PACRG-201ENST00000337019 TMEM131LA2VDJ0 1609 aa12.42□□□□□ -0.42
PACRG-201ENST00000337019 ZFYVE9O95405 1425 aa12.4□□□□□ -0.42
PACRG-201ENST00000337019 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
PACRG-201ENST00000337019 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
PACRG-201ENST00000337019 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
PACRG-201ENST00000337019 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
PACRG-201ENST00000337019 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
PACRG-201ENST00000337019 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
PACRG-201ENST00000337019 TOM1O60784 492 aa12.37□□□□□ -0.43
PACRG-201ENST00000337019 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
PACRG-201ENST00000337019 CCDC144AA2RUR9 1427 aa12.36□□□□□ -0.43
PACRG-201ENST00000337019 MYO5BQ9ULV0 1848 aa12.36□□□□□ -0.43
PACRG-201ENST00000337019 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
PACRG-201ENST00000337019 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
PACRG-201ENST00000337019 KCNA6P17658 529 aa12.34□□□□□ -0.43
PACRG-201ENST00000337019 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
PACRG-201ENST00000337019 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
PACRG-201ENST00000337019 KIF1BO60333 1816 aa12.33□□□□□ -0.44
PACRG-201ENST00000337019 FOXD1Q16676 465 aa12.33□□□□□ -0.44
PACRG-201ENST00000337019 TBX22Q9Y458 520 aa12.33□□□□□ -0.44
PACRG-201ENST00000337019 PIP4K2BP78356 416 aa12.32□□□□□ -0.44
PACRG-201ENST00000337019 PROSER2Q86WR7 435 aaPredicted RBP12.32□□□□□ -0.44
PACRG-201ENST00000337019 NWD1Q149M9 1564 aa12.32□□□□□ -0.44
PACRG-201ENST00000337019 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
PACRG-201ENST00000337019 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
PACRG-201ENST00000337019 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
PACRG-201ENST00000337019 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
PACRG-201ENST00000337019 NEXMIFQ5QGS0 1516 aa12.3□□□□□ -0.44
PACRG-201ENST00000337019 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
PACRG-201ENST00000337019 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
PACRG-201ENST00000337019 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
PACRG-201ENST00000337019 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
PACRG-201ENST00000337019 MSH6P52701 1360 aa12.28□□□□□ -0.44
PACRG-201ENST00000337019 RGL3Q3MIN7 710 aa12.27□□□□□ -0.44
PACRG-201ENST00000337019 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
PACRG-201ENST00000337019 ANKRD30BQ9BXX2 1392 aa12.25□□□□□ -0.45
PACRG-201ENST00000337019 AMOTL2Q9Y2J4 779 aa12.25□□□□□ -0.45
PACRG-201ENST00000337019 NCOA3Q9Y6Q9 1424 aa12.24□□□□□ -0.45
PACRG-201ENST00000337019 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
PACRG-201ENST00000337019 NRXN3Q9Y4C0 1643 aa12.23□□□□□ -0.45
PACRG-201ENST00000337019 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
PACRG-201ENST00000337019 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
PACRG-201ENST00000337019 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
PACRG-201ENST00000337019 ATF3P18847 181 aa12.22□□□□□ -0.45
PACRG-201ENST00000337019 PPLO60437 1756 aa12.21□□□□□ -0.45
PACRG-201ENST00000337019 METP08581 1390 aa12.21□□□□□ -0.46
PACRG-201ENST00000337019 PTPRUQ92729 1446 aa12.21□□□□□ -0.46
PACRG-201ENST00000337019 HSPA1LP34931 641 aa12.2□□□□□ -0.46
PACRG-201ENST00000337019 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
PACRG-201ENST00000337019 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
PACRG-201ENST00000337019 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
PACRG-201ENST00000337019 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
PACRG-201ENST00000337019 ADGRF5Q8IZF2 1346 aa12.19□□□□□ -0.46
PACRG-201ENST00000337019 C19orf44Q9H6X5 657 aa12.19□□□□□ -0.46
PACRG-201ENST00000337019 PTCH1Q13635 1447 aa12.18□□□□□ -0.46
PACRG-201ENST00000337019 MYOM2P54296 1465 aa12.17□□□□□ -0.46
PACRG-201ENST00000337019 DCCP43146 1447 aa12.17□□□□□ -0.46
PACRG-201ENST00000337019 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
PACRG-201ENST00000337019 PIK3C2GO75747 1445 aa12.17□□□□□ -0.46
PACRG-201ENST00000337019 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
PACRG-201ENST00000337019 ADGRL3Q9HAR2 1447 aa12.16□□□□□ -0.46
PACRG-201ENST00000337019 IFT172Q9UG01 1749 aa12.16□□□□□ -0.46
PACRG-201ENST00000337019 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.46
PACRG-201ENST00000337019 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
PACRG-201ENST00000337019 LAMC1P11047 1609 aa12.14□□□□□ -0.47
PACRG-201ENST00000337019 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
PACRG-201ENST00000337019 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
PACRG-201ENST00000337019 CCER1Q8TC90 406 aaPredicted RBP12.14□□□□□ -0.47
PACRG-201ENST00000337019 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
PACRG-201ENST00000337019 STK26Q9P289 416 aa12.14□□□□□ -0.47
PACRG-201ENST00000337019 SOCS7O14512 581 aa12.13□□□□□ -0.47
PACRG-201ENST00000337019 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
PACRG-201ENST00000337019 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
PACRG-201ENST00000337019 LRPPRCP42704 1394 aaKnown RBP12.13□□□□□ -0.47
PACRG-201ENST00000337019 ROBO2Q9HCK4 1378 aa12.13□□□□□ -0.47
PACRG-201ENST00000337019 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.13□□□□□ -0.47
PACRG-201ENST00000337019 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
PACRG-201ENST00000337019 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
PACRG-201ENST00000337019 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
PACRG-201ENST00000337019 C14orf93Q9H972 538 aaKnown RBP12.11□□□□□ -0.47
PACRG-201ENST00000337019 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
PACRG-201ENST00000337019 TECPR2O15040 1411 aa12.1□□□□□ -0.47
PACRG-201ENST00000337019 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
PACRG-201ENST00000337019 NALCNQ8IZF0 1738 aa12.09□□□□□ -0.47
PACRG-201ENST00000337019 CFAP70Q5T0N1 1121 aa12.09□□□□□ -0.47
PACRG-201ENST00000337019 MST1RQ04912 1400 aa12.09□□□□□ -0.47
PACRG-201ENST00000337019 ASXL1Q8IXJ9 1541 aa12.08□□□□□ -0.48
PACRG-201ENST00000337019 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
PACRG-201ENST00000337019 MED1Q15648 1581 aaPredicted RBP12.07□□□□□ -0.48
PACRG-201ENST00000337019 PHLPP1O60346 1717 aa12.07□□□□□ -0.48
PACRG-201ENST00000337019 BRINP3Q76B58 766 aa12.07□□□□□ -0.48
PACRG-201ENST00000337019 POGKQ9P215 609 aa12.07□□□□□ -0.48
PACRG-201ENST00000337019 JCADQ9P266 1359 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms