RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.18■■□□□ 1.46
C11orf88-201ENST00000332814 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
C11orf88-201ENST00000332814 ZNF335Q9H4Z2 1342 aaPredicted RBP24.16■■□□□ 1.46
C11orf88-201ENST00000332814 CCDC144AA2RUR9 1427 aa24.16■■□□□ 1.46
C11orf88-201ENST00000332814 ZFYVE9O95405 1425 aa24.15■■□□□ 1.46
C11orf88-201ENST00000332814 TRIM26Q12899 539 aaPredicted RBP24.14■■□□□ 1.45
C11orf88-201ENST00000332814 CERKQ8TCT0 537 aa24.14■■□□□ 1.45
C11orf88-201ENST00000332814 KIF1BO60333 1816 aa24.13■■□□□ 1.45
C11orf88-201ENST00000332814 PLEKHG1Q9ULL1 1385 aa24.11■■□□□ 1.45
C11orf88-201ENST00000332814 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
C11orf88-201ENST00000332814 NUTM2DQ5VT03 806 aaPredicted RBP24.1■■□□□ 1.45
C11orf88-201ENST00000332814 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
C11orf88-201ENST00000332814 CPS1P31327 1500 aa24.06■■□□□ 1.44
C11orf88-201ENST00000332814 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
C11orf88-201ENST00000332814 NEXMIFQ5QGS0 1516 aa24.02■■□□□ 1.44
C11orf88-201ENST00000332814 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
C11orf88-201ENST00000332814 IQSEC2Q5JU85 1478 aa24.01■■□□□ 1.43
C11orf88-201ENST00000332814 DIP2AQ14689 1571 aa23.99■■□□□ 1.43
C11orf88-201ENST00000332814 VGFO15240 615 aaPredicted RBP23.99■■□□□ 1.43
C11orf88-201ENST00000332814 RGL3Q3MIN7 710 aa23.99■■□□□ 1.43
C11orf88-201ENST00000332814 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
C11orf88-201ENST00000332814 ANKRD30BQ9BXX2 1392 aa23.97■■□□□ 1.43
C11orf88-201ENST00000332814 TBX22Q9Y458 520 aa23.97■■□□□ 1.43
C11orf88-201ENST00000332814 SPATA31E1Q6ZUB1 1445 aa23.96■■□□□ 1.43
C11orf88-201ENST00000332814 ADAMTS13Q76LX8 1427 aa23.95■■□□□ 1.42
C11orf88-201ENST00000332814 KCNA6P17658 529 aa23.95■■□□□ 1.42
C11orf88-201ENST00000332814 SETBP1Q9Y6X0 1596 aa23.95■■□□□ 1.42
C11orf88-201ENST00000332814 PPLO60437 1756 aa23.92■■□□□ 1.42
C11orf88-201ENST00000332814 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
C11orf88-201ENST00000332814 STRCP1A6NGW2 1772 aa23.91■■□□□ 1.42
C11orf88-201ENST00000332814 NWD1Q149M9 1564 aa23.91■■□□□ 1.42
C11orf88-201ENST00000332814 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
C11orf88-201ENST00000332814 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
C11orf88-201ENST00000332814 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
C11orf88-201ENST00000332814 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
C11orf88-201ENST00000332814 PROSER2Q86WR7 435 aaPredicted RBP23.87■■□□□ 1.41
C11orf88-201ENST00000332814 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
C11orf88-201ENST00000332814 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
C11orf88-201ENST00000332814 ADGRF5Q8IZF2 1346 aa23.84■■□□□ 1.41
C11orf88-201ENST00000332814 TMEM94Q12767 1356 aa23.83■■□□□ 1.41
C11orf88-201ENST00000332814 CHD2O14647 1828 aaKnown RBP23.83■■□□□ 1.41
C11orf88-201ENST00000332814 TOM1O60784 492 aa23.82■■□□□ 1.4
C11orf88-201ENST00000332814 AMOTL2Q9Y2J4 779 aa23.82■■□□□ 1.4
C11orf88-201ENST00000332814 MYOM2P54296 1465 aa23.81■■□□□ 1.4
C11orf88-201ENST00000332814 METP08581 1390 aa23.81■■□□□ 1.4
C11orf88-201ENST00000332814 ALKQ9UM73 1620 aa23.81■■□□□ 1.4
C11orf88-201ENST00000332814 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
C11orf88-201ENST00000332814 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
C11orf88-201ENST00000332814 SCAF1Q9H7N4 1312 aaKnown RBP23.79■■□□□ 1.4
C11orf88-201ENST00000332814 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
C11orf88-201ENST00000332814 PTPRUQ92729 1446 aa23.78■■□□□ 1.4
C11orf88-201ENST00000332814 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
C11orf88-201ENST00000332814 DCAF11Q8TEB1 546 aa23.77■■□□□ 1.4
C11orf88-201ENST00000332814 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
C11orf88-201ENST00000332814 MSH6P52701 1360 aa23.76■■□□□ 1.39
C11orf88-201ENST00000332814 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
C11orf88-201ENST00000332814 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
C11orf88-201ENST00000332814 KDM2AQ9Y2K7 1162 aa23.75■■□□□ 1.39
C11orf88-201ENST00000332814 SETD1AO15047 1707 aaKnown RBP23.74■■□□□ 1.39
C11orf88-201ENST00000332814 PIP4K2BP78356 416 aa23.74■■□□□ 1.39
C11orf88-201ENST00000332814 NCOA3Q9Y6Q9 1424 aa23.73■■□□□ 1.39
C11orf88-201ENST00000332814 NRXN1Q9ULB1 1477 aa23.73■■□□□ 1.39
C11orf88-201ENST00000332814 LAMC1P11047 1609 aa23.72■■□□□ 1.39
C11orf88-201ENST00000332814 XIRP1Q702N8 1843 aaKnown RBP23.72■■□□□ 1.39
C11orf88-201ENST00000332814 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
C11orf88-201ENST00000332814 PTCH1Q13635 1447 aa23.68■■□□□ 1.38
C11orf88-201ENST00000332814 SIN3AQ96ST3 1273 aa23.68■■□□□ 1.38
C11orf88-201ENST00000332814 C14orf93Q9H972 538 aaKnown RBP23.68■■□□□ 1.38
C11orf88-201ENST00000332814 CFAP70Q5T0N1 1121 aa23.66■■□□□ 1.38
C11orf88-201ENST00000332814 STK26Q9P289 416 aa23.66■■□□□ 1.38
C11orf88-201ENST00000332814 ATF3P18847 181 aa23.65■■□□□ 1.38
C11orf88-201ENST00000332814 TMEM132EQ6IEE7 984 aa23.65■■□□□ 1.38
C11orf88-201ENST00000332814 LRPPRCP42704 1394 aaKnown RBP23.65■■□□□ 1.38
C11orf88-201ENST00000332814 C19orf44Q9H6X5 657 aa23.64■■□□□ 1.37
C11orf88-201ENST00000332814 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.37
C11orf88-201ENST00000332814 ASXL1Q8IXJ9 1541 aa23.64■■□□□ 1.37
C11orf88-201ENST00000332814 ROBO2Q9HCK4 1378 aa23.63■■□□□ 1.37
C11orf88-201ENST00000332814 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
C11orf88-201ENST00000332814 CADPS2Q86UW7 1296 aa23.62■■□□□ 1.37
C11orf88-201ENST00000332814 ADGRL3Q9HAR2 1447 aa23.61■■□□□ 1.37
C11orf88-201ENST00000332814 TECPR2O15040 1411 aa23.59■■□□□ 1.37
C11orf88-201ENST00000332814 DCCP43146 1447 aa23.59■■□□□ 1.37
C11orf88-201ENST00000332814 ABCC11Q96J66 1382 aa23.59■■□□□ 1.37
C11orf88-201ENST00000332814 KNDC1Q76NI1 1749 aa23.59■■□□□ 1.37
C11orf88-201ENST00000332814 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
C11orf88-201ENST00000332814 TONSLQ96HA7 1378 aa23.58■■□□□ 1.37
C11orf88-201ENST00000332814 L3MBTL2Q969R5 705 aa23.58■■□□□ 1.37
C11orf88-201ENST00000332814 SLAIN2Q9P270 581 aa23.56■■□□□ 1.36
C11orf88-201ENST00000332814 NALCNQ8IZF0 1738 aa23.56■■□□□ 1.36
C11orf88-201ENST00000332814 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
C11orf88-201ENST00000332814 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
C11orf88-201ENST00000332814 HSPA1LP34931 641 aa23.52■■□□□ 1.36
C11orf88-201ENST00000332814 WAPLQ7Z5K2 1190 aa23.52■■□□□ 1.36
C11orf88-201ENST00000332814 POGKQ9P215 609 aa23.52■■□□□ 1.36
C11orf88-201ENST00000332814 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
C11orf88-201ENST00000332814 SIRT1Q96EB6 747 aa23.51■■□□□ 1.35
C11orf88-201ENST00000332814 DLC1Q96QB1 1528 aa23.5■■□□□ 1.35
C11orf88-201ENST00000332814 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
C11orf88-201ENST00000332814 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
C11orf88-201ENST00000332814 PRAM1Q96QH2 718 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms