RNA–Protein interactions for RNA: ENST00000326674.9

PTPMT1-202, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPMT1, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-202ENST00000326674 SCAF1Q9H7N4 1312 aaKnown RBP30.08■■■□□ 2.41
PTPMT1-202ENST00000326674 SENP3Q9H4L4 574 aaPredicted RBP30.08■■■□□ 2.41
PTPMT1-202ENST00000326674 LRRC7Q96NW7 1537 aa30.07■■■□□ 2.4
PTPMT1-202ENST00000326674 ZFYVE9O95405 1425 aa30.07■■■□□ 2.4
PTPMT1-202ENST00000326674 TOM1O60784 492 aa30.06■■■□□ 2.4
PTPMT1-202ENST00000326674 SLC26A8Q96RN1 970 aa30.06■■■□□ 2.4
PTPMT1-202ENST00000326674 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.03■■■□□ 2.4
PTPMT1-202ENST00000326674 PIP4K2BP78356 416 aa30.02■■■□□ 2.4
PTPMT1-202ENST00000326674 PLEKHG1Q9ULL1 1385 aa30.02■■■□□ 2.4
PTPMT1-202ENST00000326674 KIF1BO60333 1816 aa30.01■■■□□ 2.4
PTPMT1-202ENST00000326674 XIRP1Q702N8 1843 aaKnown RBP30.01■■■□□ 2.39
PTPMT1-202ENST00000326674 CLTCL1P53675 1640 aa30■■■□□ 2.39
PTPMT1-202ENST00000326674 NUTM2DQ5VT03 806 aaPredicted RBP29.99■■■□□ 2.39
PTPMT1-202ENST00000326674 TRPM2O94759 1503 aa29.99■■■□□ 2.39
PTPMT1-202ENST00000326674 SLC4A1APQ9BWU0 796 aaKnown RBP29.97■■■□□ 2.39
PTPMT1-202ENST00000326674 ZNF326Q5BKZ1 582 aaKnown RBP29.96■■■□□ 2.39
PTPMT1-202ENST00000326674 NWD1Q149M9 1564 aa29.94■■■□□ 2.38
PTPMT1-202ENST00000326674 KCNA6P17658 529 aa29.94■■■□□ 2.38
PTPMT1-202ENST00000326674 CHD2O14647 1828 aaKnown RBP29.94■■■□□ 2.38
PTPMT1-202ENST00000326674 DIP2AQ14689 1571 aa29.91■■■□□ 2.38
PTPMT1-202ENST00000326674 NKTRP30414 1462 aaKnown RBP29.9■■■□□ 2.38
PTPMT1-202ENST00000326674 PROSER2Q86WR7 435 aaPredicted RBP29.89■■■□□ 2.38
PTPMT1-202ENST00000326674 ALKQ9UM73 1620 aa29.89■■■□□ 2.37
PTPMT1-202ENST00000326674 TMEM94Q12767 1356 aa29.87■■■□□ 2.37
PTPMT1-202ENST00000326674 TBX22Q9Y458 520 aa29.85■■■□□ 2.37
PTPMT1-202ENST00000326674 ADAMTS13Q76LX8 1427 aa29.83■■■□□ 2.37
PTPMT1-202ENST00000326674 NEXMIFQ5QGS0 1516 aa29.82■■■□□ 2.36
PTPMT1-202ENST00000326674 RBM33Q96EV2 1170 aaKnown RBP29.82■■■□□ 2.36
PTPMT1-202ENST00000326674 SETD5Q9C0A6 1442 aa29.81■■■□□ 2.36
PTPMT1-202ENST00000326674 HSPA1LP34931 641 aa29.8■■■□□ 2.36
PTPMT1-202ENST00000326674 FOXD1Q16676 465 aa29.8■■■□□ 2.36
PTPMT1-202ENST00000326674 NRXN3Q9Y4C0 1643 aa29.79■■■□□ 2.36
PTPMT1-202ENST00000326674 SETBP1Q9Y6X0 1596 aa29.78■■■□□ 2.36
PTPMT1-202ENST00000326674 MPHOSPH9Q99550 1183 aa29.77■■■□□ 2.36
PTPMT1-202ENST00000326674 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
PTPMT1-202ENST00000326674 DISP3Q9P2K9 1392 aa29.77■■■□□ 2.36
PTPMT1-202ENST00000326674 ACIN1Q9UKV3 1341 aaKnown RBP29.76■■■□□ 2.36
PTPMT1-202ENST00000326674 MSH6P52701 1360 aa29.76■■■□□ 2.35
PTPMT1-202ENST00000326674 CCDC144AA2RUR9 1427 aa29.73■■■□□ 2.35
PTPMT1-202ENST00000326674 PPLO60437 1756 aa29.73■■■□□ 2.35
PTPMT1-202ENST00000326674 C14orf37Q86TY3 774 aa29.73■■■□□ 2.35
PTPMT1-202ENST00000326674 RAB3GAP2Q9H2M9 1393 aa29.71■■■□□ 2.35
PTPMT1-202ENST00000326674 AMOTL2Q9Y2J4 779 aa29.69■■■□□ 2.34
PTPMT1-202ENST00000326674 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
PTPMT1-202ENST00000326674 ROBO1Q9Y6N7 1651 aa29.67■■■□□ 2.34
PTPMT1-202ENST00000326674 VGFO15240 615 aaPredicted RBP29.67■■■□□ 2.34
PTPMT1-202ENST00000326674 PTPRUQ92729 1446 aa29.67■■■□□ 2.34
PTPMT1-202ENST00000326674 RPGRIP1LQ68CZ1 1315 aa29.66■■■□□ 2.34
PTPMT1-202ENST00000326674 NCOA3Q9Y6Q9 1424 aa29.64■■■□□ 2.34
PTPMT1-202ENST00000326674 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.64■■■□□ 2.34
PTPMT1-202ENST00000326674 METP08581 1390 aa29.62■■■□□ 2.33
PTPMT1-202ENST00000326674 FAM135BQ49AJ0 1406 aa29.62■■■□□ 2.33
PTPMT1-202ENST00000326674 SETD1AO15047 1707 aaKnown RBP29.6■■■□□ 2.33
PTPMT1-202ENST00000326674 RGL3Q3MIN7 710 aa29.6■■■□□ 2.33
PTPMT1-202ENST00000326674 IFT172Q9UG01 1749 aa29.59■■■□□ 2.33
PTPMT1-202ENST00000326674 MED1Q15648 1581 aaPredicted RBP29.59■■■□□ 2.33
PTPMT1-202ENST00000326674 SLAIN2Q9P270 581 aa29.56■■■□□ 2.32
PTPMT1-202ENST00000326674 ATF3P18847 181 aa29.55■■■□□ 2.32
PTPMT1-202ENST00000326674 SPATA31E1Q6ZUB1 1445 aa29.54■■■□□ 2.32
PTPMT1-202ENST00000326674 C19orf44Q9H6X5 657 aa29.54■■■□□ 2.32
PTPMT1-202ENST00000326674 PHLPP1O60346 1717 aa29.54■■■□□ 2.32
PTPMT1-202ENST00000326674 CADPS2Q86UW7 1296 aa29.53■■■□□ 2.32
PTPMT1-202ENST00000326674 ANKRD30BQ9BXX2 1392 aa29.51■■■□□ 2.31
PTPMT1-202ENST00000326674 NALCNQ8IZF0 1738 aa29.49■■■□□ 2.31
PTPMT1-202ENST00000326674 ADGRF5Q8IZF2 1346 aa29.46■■■□□ 2.31
PTPMT1-202ENST00000326674 DCCP43146 1447 aa29.46■■■□□ 2.31
PTPMT1-202ENST00000326674 PTCH1Q13635 1447 aa29.44■■■□□ 2.3
PTPMT1-202ENST00000326674 ADGRL3Q9HAR2 1447 aa29.44■■■□□ 2.3
PTPMT1-202ENST00000326674 PHF23Q9BUL5 403 aaPredicted RBP29.43■■■□□ 2.3
PTPMT1-202ENST00000326674 HRCP23327 699 aa29.42■■■□□ 2.3
PTPMT1-202ENST00000326674 ILDR2Q71H61 639 aa29.42■■■□□ 2.3
PTPMT1-202ENST00000326674 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
PTPMT1-202ENST00000326674 PIK3C2GO75747 1445 aa29.37■■■□□ 2.29
PTPMT1-202ENST00000326674 LAMC1P11047 1609 aa29.36■■■□□ 2.29
PTPMT1-202ENST00000326674 COL16A1Q07092 1604 aaPredicted RBP29.36■■■□□ 2.29
PTPMT1-202ENST00000326674 AHDC1Q5TGY3 1603 aaPredicted RBP29.35■■■□□ 2.29
PTPMT1-202ENST00000326674 MST1RQ04912 1400 aa29.35■■■□□ 2.29
PTPMT1-202ENST00000326674 PRAG1Q86YV5 1406 aa29.35■■■□□ 2.29
PTPMT1-202ENST00000326674 MYOM2P54296 1465 aa29.35■■■□□ 2.29
PTPMT1-202ENST00000326674 KNDC1Q76NI1 1749 aa29.34■■■□□ 2.29
PTPMT1-202ENST00000326674 STK26Q9P289 416 aa29.34■■■□□ 2.29
PTPMT1-202ENST00000326674 ASXL1Q8IXJ9 1541 aa29.33■■■□□ 2.29
PTPMT1-202ENST00000326674 BRINP3Q76B58 766 aa29.32■■■□□ 2.28
PTPMT1-202ENST00000326674 JCADQ9P266 1359 aa29.3■■■□□ 2.28
PTPMT1-202ENST00000326674 TMEM132EQ6IEE7 984 aa29.3■■■□□ 2.28
PTPMT1-202ENST00000326674 LRPPRCP42704 1394 aaKnown RBP29.28■■■□□ 2.28
PTPMT1-202ENST00000326674 NHSL1Q5SYE7 1610 aa29.28■■■□□ 2.28
PTPMT1-202ENST00000326674 NRXN1Q9ULB1 1477 aa29.28■■■□□ 2.28
PTPMT1-202ENST00000326674 TECPR2O15040 1411 aa29.25■■■□□ 2.27
PTPMT1-202ENST00000326674 YTHDC2Q9H6S0 1430 aaKnown RBP29.25■■■□□ 2.27
PTPMT1-202ENST00000326674 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
PTPMT1-202ENST00000326674 C1orf167Q5SNV9 1468 aa29.23■■■□□ 2.27
PTPMT1-202ENST00000326674 CDC42BPGQ6DT37 1551 aa29.23■■■□□ 2.27
PTPMT1-202ENST00000326674 CFAP70Q5T0N1 1121 aa29.23■■■□□ 2.27
PTPMT1-202ENST00000326674 KDM2AQ9Y2K7 1162 aa29.23■■■□□ 2.27
PTPMT1-202ENST00000326674 DCAF11Q8TEB1 546 aa29.22■■■□□ 2.27
PTPMT1-202ENST00000326674 C14orf93Q9H972 538 aaKnown RBP29.22■■■□□ 2.27
PTPMT1-202ENST00000326674 DHX57Q6P158 1386 aaKnown RBP29.22■■■□□ 2.27
PTPMT1-202ENST00000326674 ABCC11Q96J66 1382 aa29.22■■■□□ 2.27
PTPMT1-202ENST00000326674 WAPLQ7Z5K2 1190 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms