RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 SKOR2Q2VWA4 1001 aaPredicted RBP22.16■■□□□ 1.14
MINDY2-201ENST00000316848 NOC3LQ8WTT2 800 aaKnown RBP22.16■■□□□ 1.14
MINDY2-201ENST00000316848 ROCK1Q13464 1354 aa22.16■■□□□ 1.14
MINDY2-201ENST00000316848 ZKSCAN1P17029 563 aaPredicted RBP22.15■■□□□ 1.14
MINDY2-201ENST00000316848 MARCH6O60337 910 aa22.15■■□□□ 1.14
MINDY2-201ENST00000316848 CUX1P39880 1505 aa22.15■■□□□ 1.14
MINDY2-201ENST00000316848 FOXD4L5Q5VV16 416 aaPredicted RBP22.14■■□□□ 1.14
MINDY2-201ENST00000316848 FOXD4L4Q8WXT5 416 aaPredicted RBP22.14■■□□□ 1.14
MINDY2-201ENST00000316848 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
MINDY2-201ENST00000316848 ZNF644Q9H582 1327 aaPredicted RBP22.14■■□□□ 1.14
MINDY2-201ENST00000316848 GNAI1P63096 354 aa22.13■■□□□ 1.13
MINDY2-201ENST00000316848 PSME1Q06323 249 aa22.13■■□□□ 1.13
MINDY2-201ENST00000316848 AKAP17AQ02040 695 aaKnown RBP22.13■■□□□ 1.13
MINDY2-201ENST00000316848 ANKRD50Q9ULJ7 1429 aa22.13■■□□□ 1.13
MINDY2-201ENST00000316848 NCBP3Q53F19 620 aaKnown RBP22.13■■□□□ 1.13
MINDY2-201ENST00000316848 KIF7Q2M1P5 1343 aa22.13■■□□□ 1.13
MINDY2-201ENST00000316848 SYNE3Q6ZMZ3 975 aa22.12■■□□□ 1.13
MINDY2-201ENST00000316848 MIA2Q96PC5 1412 aa22.12■■□□□ 1.13
MINDY2-201ENST00000316848 TPM3P06753 285 aa22.12■■□□□ 1.13
MINDY2-201ENST00000316848 FKBP5Q13451 457 aaPredicted RBP22.11■■□□□ 1.13
MINDY2-201ENST00000316848 AAMPQ13685 434 aa22.11■■□□□ 1.13
MINDY2-201ENST00000316848 CREBRFQ8IUR6 639 aa22.11■■□□□ 1.13
MINDY2-201ENST00000316848 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
MINDY2-201ENST00000316848 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
MINDY2-201ENST00000316848 HSP90AB4PQ58FF6 505 aa22.07■■□□□ 1.12
MINDY2-201ENST00000316848 GOLGA6L19H0YKK7 550 aa22.07■■□□□ 1.12
MINDY2-201ENST00000316848 BECN2A8MW95 431 aa22.07■■□□□ 1.12
MINDY2-201ENST00000316848 FAM69CQ0P6D2 419 aa22.07■■□□□ 1.12
MINDY2-201ENST00000316848 SLC4A3P48751 1232 aa22.06■■□□□ 1.12
MINDY2-201ENST00000316848 G3BP1Q13283 466 aaKnown RBP eCLIP22.06■■□□□ 1.12
MINDY2-201ENST00000316848 RNF20Q5VTR2 975 aa22.06■■□□□ 1.12
MINDY2-201ENST00000316848 LRRC9Q6ZRR7 1453 aa22.06■■□□□ 1.12
MINDY2-201ENST00000316848 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
MINDY2-201ENST00000316848 CEP89Q96ST8 783 aa22.04■■□□□ 1.12
MINDY2-201ENST00000316848 VPS53Q5VIR6 699 aa22.04■■□□□ 1.12
MINDY2-201ENST00000316848 RAPGEF4Q8WZA2 1011 aa22.04■■□□□ 1.12
MINDY2-201ENST00000316848 TPD52L1Q16890 204 aaPredicted RBP22.04■■□□□ 1.12
MINDY2-201ENST00000316848 NECTIN2Q92692 538 aa22.04■■□□□ 1.12
MINDY2-201ENST00000316848 AMOTL1Q8IY63 956 aa22.03■■□□□ 1.12
MINDY2-201ENST00000316848 GOLGA6L1Q8N7Z2 621 aa22.03■■□□□ 1.12
MINDY2-201ENST00000316848 NOL10Q9BSC4 688 aaKnown RBP22.03■■□□□ 1.12
MINDY2-201ENST00000316848 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
MINDY2-201ENST00000316848 GGNBP2Q9H3C7 697 aa22.03■■□□□ 1.12
MINDY2-201ENST00000316848 CNTLNQ9NXG0 1405 aa22.03■■□□□ 1.12
MINDY2-201ENST00000316848 MCTP1Q6DN14 999 aa22.03■■□□□ 1.12
MINDY2-201ENST00000316848 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.12
MINDY2-201ENST00000316848 TSR1Q2NL82 804 aaKnown RBP22.02■■□□□ 1.12
MINDY2-201ENST00000316848 ANO2Q9NQ90 1003 aa22.02■■□□□ 1.12
MINDY2-201ENST00000316848 CPLX1O14810 134 aa22.02■■□□□ 1.11
MINDY2-201ENST00000316848 TRIM29Q14134 588 aa22.01■■□□□ 1.11
MINDY2-201ENST00000316848 GSE1Q14687 1217 aa22.01■■□□□ 1.11
MINDY2-201ENST00000316848 CHMP5Q9NZZ3 219 aa22.01■■□□□ 1.11
MINDY2-201ENST00000316848 TRDNQ13061 729 aa22.01■■□□□ 1.11
MINDY2-201ENST00000316848 PES1O00541 588 aaKnown RBP22.01■■□□□ 1.11
MINDY2-201ENST00000316848 FOXD4L6Q3SYB3 417 aaPredicted RBP22.01■■□□□ 1.11
MINDY2-201ENST00000316848 INTS3Q68E01 1043 aaKnown RBP22.01■■□□□ 1.11
MINDY2-201ENST00000316848 FOXD4L3Q6VB84 417 aaPredicted RBP22.01■■□□□ 1.11
MINDY2-201ENST00000316848 BRD4O60885 1362 aaPredicted RBP22■■□□□ 1.11
MINDY2-201ENST00000316848 HMOX1P09601 288 aa22■■□□□ 1.11
MINDY2-201ENST00000316848 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 NCOA2Q15596 1464 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 KIF21BO75037 1637 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 ARID3AQ99856 593 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 ERC2O15083 957 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 APPP05067 770 aa21.99■■□□□ 1.11
MINDY2-201ENST00000316848 TPM1P09493 284 aa21.98■■□□□ 1.11
MINDY2-201ENST00000316848 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.111e-6■■■■□ 22.5
MINDY2-201ENST00000316848 LNPKQ9C0E8 428 aa21.97■■□□□ 1.11
MINDY2-201ENST00000316848 TMEM132EQ6IEE7 984 aa21.96■■□□□ 1.11
MINDY2-201ENST00000316848 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
MINDY2-201ENST00000316848 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
MINDY2-201ENST00000316848 MTHFSP49914 203 aa21.96■■□□□ 1.11
MINDY2-201ENST00000316848 A0A0U1RQG5 324 aaPredicted RBP21.96■■□□□ 1.11
MINDY2-201ENST00000316848 ATF3P18847 181 aa21.95■■□□□ 1.1
MINDY2-201ENST00000316848 VPS37DQ86XT2 251 aa21.95■■□□□ 1.1
MINDY2-201ENST00000316848 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
MINDY2-201ENST00000316848 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
MINDY2-201ENST00000316848 TPM2P07951 284 aa21.95■■□□□ 1.1
MINDY2-201ENST00000316848 NLRP6P59044 892 aa21.95■■□□□ 1.1
MINDY2-201ENST00000316848 NUCB2P80303 420 aa21.95■■□□□ 1.1
MINDY2-201ENST00000316848 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
MINDY2-201ENST00000316848 ADAMTS8Q9UP79 889 aa21.94■■□□□ 1.1
MINDY2-201ENST00000316848 MSH5O43196 834 aa21.93■■□□□ 1.1
MINDY2-201ENST00000316848 CFAP70Q5T0N1 1121 aa21.93■■□□□ 1.1
MINDY2-201ENST00000316848 NLRP2Q9NX02 1062 aa21.92■■□□□ 1.1
MINDY2-201ENST00000316848 TCP11L2Q8N4U5 519 aa21.92■■□□□ 1.1
MINDY2-201ENST00000316848 RIC3Q7Z5B4 369 aa21.92■■□□□ 1.1
MINDY2-201ENST00000316848 CCDC47Q96A33 483 aaKnown RBP21.92■■□□□ 1.1
MINDY2-201ENST00000316848 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
MINDY2-201ENST00000316848 UBTFL1P0CB47 393 aaPredicted RBP21.91■■□□□ 1.1
MINDY2-201ENST00000316848 SMC3Q9UQE7 1217 aa21.91■■□□□ 1.1
MINDY2-201ENST00000316848 HFM1A2PYH4 1435 aa21.91■■□□□ 1.1
MINDY2-201ENST00000316848 C22orf23Q9BZE7 217 aa21.91■■□□□ 1.1
MINDY2-201ENST00000316848 BICD2Q8TD16 824 aa21.9■■□□□ 1.1
MINDY2-201ENST00000316848 PANK1Q8TE04 598 aa21.9■■□□□ 1.1
MINDY2-201ENST00000316848 TRIM34Q9BYJ4 488 aa21.9■■□□□ 1.1
MINDY2-201ENST00000316848 ANKRD20A12PQ8NF67 263 aa21.89■■□□□ 1.09
MINDY2-201ENST00000316848 HOOK1Q9UJC3 728 aaKnown RBP21.89■■□□□ 1.09
MINDY2-201ENST00000316848 GNAI3P08754 354 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms