RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
MINDY2-201ENST00000316848 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
MINDY2-201ENST00000316848 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
MINDY2-201ENST00000316848 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
MINDY2-201ENST00000316848 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
MINDY2-201ENST00000316848 APLP2Q06481 763 aa28.41■■■□□ 2.14
MINDY2-201ENST00000316848 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
MINDY2-201ENST00000316848 FAM9AQ8IZU1 332 aaPredicted RBP28.01■■■□□ 2.08
MINDY2-201ENST00000316848 PCGF6Q9BYE7 350 aa27.71■■■□□ 2.03
MINDY2-201ENST00000316848 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
MINDY2-201ENST00000316848 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
MINDY2-201ENST00000316848 ZEB1P37275 1124 aaPredicted RBP27.46■■□□□ 1.99
MINDY2-201ENST00000316848 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
MINDY2-201ENST00000316848 CCER1Q8TC90 406 aaPredicted RBP27.33■■□□□ 1.97
MINDY2-201ENST00000316848 CENPBP07199 599 aaPredicted RBP27.32■■□□□ 1.96
MINDY2-201ENST00000316848 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
MINDY2-201ENST00000316848 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
MINDY2-201ENST00000316848 ERICH6Q7L0X2 663 aa26.95■■□□□ 1.91
MINDY2-201ENST00000316848 NEFLP07196 543 aa26.77■■□□□ 1.88
MINDY2-201ENST00000316848 TRIM26Q12899 539 aaPredicted RBP26.64■■□□□ 1.86
MINDY2-201ENST00000316848 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
MINDY2-201ENST00000316848 YTHDC1Q96MU7 727 aaKnown RBP26.56■■□□□ 1.84
MINDY2-201ENST00000316848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
MINDY2-201ENST00000316848 HNRNPUL2Q1KMD3 747 aaKnown RBP26.38■■□□□ 1.81
MINDY2-201ENST00000316848 ITGAEP38570 1179 aa26.35■■□□□ 1.81
MINDY2-201ENST00000316848 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
MINDY2-201ENST00000316848 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
MINDY2-201ENST00000316848 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
MINDY2-201ENST00000316848 HRCP23327 699 aa26.24■■□□□ 1.79
MINDY2-201ENST00000316848 POLR3GLQ9BT43 218 aa26.13■■□□□ 1.77
MINDY2-201ENST00000316848 MYT1Q01538 1121 aa26.11■■□□□ 1.77
MINDY2-201ENST00000316848 DAXXQ9UER7 740 aaPredicted RBP25.96■■□□□ 1.75
MINDY2-201ENST00000316848 CNGB1Q14028 1251 aaPredicted RBP25.79■■□□□ 1.72
MINDY2-201ENST00000316848 FAM50AQ14320 339 aaKnown RBP25.72■■□□□ 1.71
MINDY2-201ENST00000316848 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
MINDY2-201ENST00000316848 ABCC9O60706 1549 aa25.71■■□□□ 1.71
MINDY2-201ENST00000316848 DIEXFQ68CQ4 756 aaKnown RBP25.67■■□□□ 1.7
MINDY2-201ENST00000316848 SLC4A1APQ9BWU0 796 aaKnown RBP25.65■■□□□ 1.7
MINDY2-201ENST00000316848 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
MINDY2-201ENST00000316848 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
MINDY2-201ENST00000316848 NEUROD1Q13562 356 aa25.44■■□□□ 1.66
MINDY2-201ENST00000316848 ZNF316A6NFI3 1004 aaPredicted RBP25.31■■□□□ 1.64
MINDY2-201ENST00000316848 RTL5Q5HYW3 569 aaPredicted RBP25.31■■□□□ 1.64
MINDY2-201ENST00000316848 ANP32CO43423 234 aa25.28■■□□□ 1.64
MINDY2-201ENST00000316848 FBLN2P98095 1184 aa25.28■■□□□ 1.64
MINDY2-201ENST00000316848 ZNF326Q5BKZ1 582 aaKnown RBP25.26■■□□□ 1.63
MINDY2-201ENST00000316848 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
MINDY2-201ENST00000316848 P3H3Q8IVL6 736 aa25.06■■□□□ 1.6
MINDY2-201ENST00000316848 ZBTB47Q9UFB7 747 aaPredicted RBP25.03■■□□□ 1.6
MINDY2-201ENST00000316848 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
MINDY2-201ENST00000316848 BCANQ96GW7 911 aa25.01■■□□□ 1.59
MINDY2-201ENST00000316848 GTF3C3Q9Y5Q9 886 aa25.01■■□□□ 1.59
MINDY2-201ENST00000316848 ARID3CA6NKF2 412 aa24.94■■□□□ 1.58
MINDY2-201ENST00000316848 NEFMP07197 916 aa24.93■■□□□ 1.58
MINDY2-201ENST00000316848 ZNF777Q9ULD5 760 aaPredicted RBP24.89■■□□□ 1.58
MINDY2-201ENST00000316848 CANXP27824 592 aaKnown RBP24.87■■□□□ 1.57
MINDY2-201ENST00000316848 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
MINDY2-201ENST00000316848 SLC24A1O60721 1099 aa24.75■■□□□ 1.55
MINDY2-201ENST00000316848 TONSLQ96HA7 1378 aa24.71■■□□□ 1.55
MINDY2-201ENST00000316848 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
MINDY2-201ENST00000316848 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
MINDY2-201ENST00000316848 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
MINDY2-201ENST00000316848 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
MINDY2-201ENST00000316848 ANP32AP39687 249 aaKnown RBP24.58■■□□□ 1.53
MINDY2-201ENST00000316848 NPM1P06748 294 aaKnown RBP eCLIP24.57■■□□□ 1.52
MINDY2-201ENST00000316848 CHGAP10645 457 aaKnown RBP24.54■■□□□ 1.52
MINDY2-201ENST00000316848 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
MINDY2-201ENST00000316848 STAG3Q9UJ98 1225 aa24.52■■□□□ 1.52
MINDY2-201ENST00000316848 HNRNPUQ00839 825 aaKnown RBP eCLIP24.46■■□□□ 1.51
MINDY2-201ENST00000316848 DDX10Q13206 875 aaKnown RBP24.46■■□□□ 1.51
MINDY2-201ENST00000316848 TSPY4P0CV99 314 aa24.43■■□□□ 1.5
MINDY2-201ENST00000316848 TSPY10P0CW01 314 aa24.43■■□□□ 1.5
MINDY2-201ENST00000316848 CHIC2Q9UKJ5 165 aa24.41■■□□□ 1.5
MINDY2-201ENST00000316848 FKBP8Q14318 412 aa24.4■■□□□ 1.5
MINDY2-201ENST00000316848 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
MINDY2-201ENST00000316848 MTUS2Q5JR59 1369 aa24.37■■□□□ 1.49
MINDY2-201ENST00000316848 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
MINDY2-201ENST00000316848 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
MINDY2-201ENST00000316848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.34■■□□□ 1.494e-6■■■■□ 19.6
MINDY2-201ENST00000316848 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
MINDY2-201ENST00000316848 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
MINDY2-201ENST00000316848 CLIP1P30622 1438 aa24.27■■□□□ 1.48
MINDY2-201ENST00000316848 HSP90AA1P07900 732 aaKnown RBP24.26■■□□□ 1.47
MINDY2-201ENST00000316848 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.24■■□□□ 1.47
MINDY2-201ENST00000316848 SALL2Q9Y467 1007 aaPredicted RBP24.23■■□□□ 1.47
MINDY2-201ENST00000316848 WDR43Q15061 677 aaKnown RBP eCLIP24.21■■□□□ 1.47
MINDY2-201ENST00000316848 MRS2Q9HD23 443 aa24.21■■□□□ 1.47
MINDY2-201ENST00000316848 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
MINDY2-201ENST00000316848 ANP32BQ92688 251 aaKnown RBP24.18■■□□□ 1.46
MINDY2-201ENST00000316848 CCDC136Q96JN2 1154 aa24.18■■□□□ 1.46
MINDY2-201ENST00000316848 EEA1Q15075 1411 aa24.18■■□□□ 1.46
MINDY2-201ENST00000316848 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
MINDY2-201ENST00000316848 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
MINDY2-201ENST00000316848 EIF4G2P78344 907 aaKnown RBP eCLIP24.13■■□□□ 1.45
MINDY2-201ENST00000316848 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
MINDY2-201ENST00000316848 PLEKHD1A6NEE1 506 aa24.06■■□□□ 1.44
MINDY2-201ENST00000316848 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
MINDY2-201ENST00000316848 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
MINDY2-201ENST00000316848 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
MINDY2-201ENST00000316848 MIER1Q8N108 512 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms