RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ADAMTS13Q76LX8 1427 aa22.03■■□□□ 1.12
PPP1CA-201ENST00000312989 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
PPP1CA-201ENST00000312989 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
PPP1CA-201ENST00000312989 UBAP1LF5GYI3 381 aa22.01■■□□□ 1.11
PPP1CA-201ENST00000312989 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
PPP1CA-201ENST00000312989 KCNA6P17658 529 aa21.97■■□□□ 1.11
PPP1CA-201ENST00000312989 TRIM52Q96A61 297 aa21.97■■□□□ 1.11
PPP1CA-201ENST00000312989 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
PPP1CA-201ENST00000312989 NUTM2DQ5VT03 806 aaPredicted RBP21.96■■□□□ 1.11
PPP1CA-201ENST00000312989 NRXN3Q9Y4C0 1643 aa21.95■■□□□ 1.1
PPP1CA-201ENST00000312989 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.95■■□□□ 1.1
PPP1CA-201ENST00000312989 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.1
PPP1CA-201ENST00000312989 NEXMIFQ5QGS0 1516 aa21.95■■□□□ 1.1
PPP1CA-201ENST00000312989 NKTRP30414 1462 aaKnown RBP21.94■■□□□ 1.1
PPP1CA-201ENST00000312989 SETD5Q9C0A6 1442 aa21.94■■□□□ 1.1
PPP1CA-201ENST00000312989 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
PPP1CA-201ENST00000312989 TBX22Q9Y458 520 aa21.93■■□□□ 1.1
PPP1CA-201ENST00000312989 TMEM94Q12767 1356 aa21.93■■□□□ 1.1
PPP1CA-201ENST00000312989 FOXD1Q16676 465 aa21.92■■□□□ 1.1
PPP1CA-201ENST00000312989 DIP2AQ14689 1571 aa21.92■■□□□ 1.1
PPP1CA-201ENST00000312989 SETBP1Q9Y6X0 1596 aa21.92■■□□□ 1.1
PPP1CA-201ENST00000312989 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
PPP1CA-201ENST00000312989 HDGFP51858 240 aaKnown RBP21.91■■□□□ 1.1
PPP1CA-201ENST00000312989 PTPRUQ92729 1446 aa21.89■■□□□ 1.1
PPP1CA-201ENST00000312989 TOM1O60784 492 aa21.89■■□□□ 1.1
PPP1CA-201ENST00000312989 MPHOSPH9Q99550 1183 aa21.89■■□□□ 1.1
PPP1CA-201ENST00000312989 RAB3GAP2Q9H2M9 1393 aa21.89■■□□□ 1.1
PPP1CA-201ENST00000312989 CHD2O14647 1828 aaKnown RBP21.87■■□□□ 1.09
PPP1CA-201ENST00000312989 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
PPP1CA-201ENST00000312989 RBM33Q96EV2 1170 aaKnown RBP21.87■■□□□ 1.09
PPP1CA-201ENST00000312989 PIP4K2BP78356 416 aa21.86■■□□□ 1.09
PPP1CA-201ENST00000312989 BCANQ96GW7 911 aa21.85■■□□□ 1.09
PPP1CA-201ENST00000312989 SPATA31E1Q6ZUB1 1445 aa21.85■■□□□ 1.09
PPP1CA-201ENST00000312989 METP08581 1390 aa21.83■■□□□ 1.09
PPP1CA-201ENST00000312989 HSPA1LP34931 641 aa21.83■■□□□ 1.08
PPP1CA-201ENST00000312989 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
PPP1CA-201ENST00000312989 XRN1Q8IZH2 1706 aaKnown RBP21.82■■□□□ 1.08
PPP1CA-201ENST00000312989 PROSER2Q86WR7 435 aaPredicted RBP21.81■■□□□ 1.08
PPP1CA-201ENST00000312989 KIF1BO60333 1816 aa21.81■■□□□ 1.08
PPP1CA-201ENST00000312989 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
PPP1CA-201ENST00000312989 NCOA3Q9Y6Q9 1424 aa21.79■■□□□ 1.08
PPP1CA-201ENST00000312989 SETD1AO15047 1707 aaKnown RBP21.78■■□□□ 1.08
PPP1CA-201ENST00000312989 RPGRIP1LQ68CZ1 1315 aa21.77■■□□□ 1.08
PPP1CA-201ENST00000312989 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
PPP1CA-201ENST00000312989 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
PPP1CA-201ENST00000312989 PPLO60437 1756 aa21.75■■□□□ 1.07
PPP1CA-201ENST00000312989 FAM135BQ49AJ0 1406 aa21.75■■□□□ 1.07
PPP1CA-201ENST00000312989 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
PPP1CA-201ENST00000312989 PRAG1Q86YV5 1406 aa21.74■■□□□ 1.07
PPP1CA-201ENST00000312989 HRCP23327 699 aa21.73■■□□□ 1.07
PPP1CA-201ENST00000312989 MSH6P52701 1360 aa21.72■■□□□ 1.07
PPP1CA-201ENST00000312989 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
PPP1CA-201ENST00000312989 ADGRF5Q8IZF2 1346 aa21.71■■□□□ 1.07
PPP1CA-201ENST00000312989 IFT172Q9UG01 1749 aa21.71■■□□□ 1.07
PPP1CA-201ENST00000312989 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
PPP1CA-201ENST00000312989 ROBO1Q9Y6N7 1651 aa21.67■■□□□ 1.06
PPP1CA-201ENST00000312989 ASXL1Q8IXJ9 1541 aa21.67■■□□□ 1.06
PPP1CA-201ENST00000312989 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.66■■□□□ 1.06
PPP1CA-201ENST00000312989 PIK3C2GO75747 1445 aa21.66■■□□□ 1.06
PPP1CA-201ENST00000312989 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
PPP1CA-201ENST00000312989 NRXN1Q9ULB1 1477 aa21.66■■□□□ 1.06
PPP1CA-201ENST00000312989 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
PPP1CA-201ENST00000312989 C19orf44Q9H6X5 657 aa21.65■■□□□ 1.06
PPP1CA-201ENST00000312989 DCCP43146 1447 aa21.65■■□□□ 1.06
PPP1CA-201ENST00000312989 SLAIN2Q9P270 581 aa21.64■■□□□ 1.06
PPP1CA-201ENST00000312989 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
PPP1CA-201ENST00000312989 DISP3Q9P2K9 1392 aa21.64■■□□□ 1.06
PPP1CA-201ENST00000312989 MED1Q15648 1581 aaPredicted RBP21.63■■□□□ 1.05
PPP1CA-201ENST00000312989 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
PPP1CA-201ENST00000312989 MYOM2P54296 1465 aa21.61■■□□□ 1.05
PPP1CA-201ENST00000312989 MST1RQ04912 1400 aa21.6■■□□□ 1.05
PPP1CA-201ENST00000312989 NALCNQ8IZF0 1738 aa21.6■■□□□ 1.05
PPP1CA-201ENST00000312989 TECPR2O15040 1411 aa21.59■■□□□ 1.05
PPP1CA-201ENST00000312989 CADPS2Q86UW7 1296 aa21.59■■□□□ 1.05
PPP1CA-201ENST00000312989 ILDR2Q71H61 639 aa21.58■■□□□ 1.04
PPP1CA-201ENST00000312989 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
PPP1CA-201ENST00000312989 COL16A1Q07092 1604 aaPredicted RBP21.55■■□□□ 1.04
PPP1CA-201ENST00000312989 LRPPRCP42704 1394 aaKnown RBP21.55■■□□□ 1.04
PPP1CA-201ENST00000312989 AHDC1Q5TGY3 1603 aaPredicted RBP21.54■■□□□ 1.04
PPP1CA-201ENST00000312989 ATF3P18847 181 aa21.54■■□□□ 1.04
PPP1CA-201ENST00000312989 BRINP3Q76B58 766 aa21.54■■□□□ 1.04
PPP1CA-201ENST00000312989 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
PPP1CA-201ENST00000312989 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
PPP1CA-201ENST00000312989 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
PPP1CA-201ENST00000312989 TMEM132EQ6IEE7 984 aa21.5■■□□□ 1.03
PPP1CA-201ENST00000312989 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
PPP1CA-201ENST00000312989 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
PPP1CA-201ENST00000312989 ADGRB1O14514 1584 aa21.49■■□□□ 1.03
PPP1CA-201ENST00000312989 C1orf167Q5SNV9 1468 aa21.49■■□□□ 1.03
PPP1CA-201ENST00000312989 YTHDC2Q9H6S0 1430 aaKnown RBP21.49■■□□□ 1.03
PPP1CA-201ENST00000312989 PHLPP1O60346 1717 aa21.49■■□□□ 1.03
PPP1CA-201ENST00000312989 CFAP70Q5T0N1 1121 aa21.48■■□□□ 1.03
PPP1CA-201ENST00000312989 CDC42BPGQ6DT37 1551 aa21.47■■□□□ 1.03
PPP1CA-201ENST00000312989 LAMC1P11047 1609 aa21.46■■□□□ 1.03
PPP1CA-201ENST00000312989 NHSL1Q5SYE7 1610 aa21.45■■□□□ 1.02
PPP1CA-201ENST00000312989 WAPLQ7Z5K2 1190 aa21.45■■□□□ 1.02
PPP1CA-201ENST00000312989 STK26Q9P289 416 aa21.44■■□□□ 1.02
PPP1CA-201ENST00000312989 JCADQ9P266 1359 aa21.44■■□□□ 1.02
PPP1CA-201ENST00000312989 RGS17Q9UGC6 210 aaPredicted RBP21.43■■□□□ 1.02
PPP1CA-201ENST00000312989 SIRT1Q96EB6 747 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 310.3 ms