RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 FOXD1Q16676 465 aa27.68■■■□□ 2.02
UPK3B-201ENST00000257632 HDGFP51858 240 aaKnown RBP27.67■■■□□ 2.02
UPK3B-201ENST00000257632 DISP3Q9P2K9 1392 aa27.67■■■□□ 2.02
UPK3B-201ENST00000257632 RIMS2Q9UQ26 1411 aa27.66■■■□□ 2.02
UPK3B-201ENST00000257632 PPP1R15AO75807 674 aaPredicted RBP27.64■■■□□ 2.02
UPK3B-201ENST00000257632 KIF1BO60333 1816 aa27.64■■■□□ 2.01
UPK3B-201ENST00000257632 HRCP23327 699 aa27.63■■■□□ 2.01
UPK3B-201ENST00000257632 ZFYVE9O95405 1425 aa27.62■■■□□ 2.01
UPK3B-201ENST00000257632 ZNF326Q5BKZ1 582 aaKnown RBP27.62■■■□□ 2.01
UPK3B-201ENST00000257632 BCANQ96GW7 911 aa27.62■■■□□ 2.01
UPK3B-201ENST00000257632 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.61■■■□□ 2.01
UPK3B-201ENST00000257632 NUTM2DQ5VT03 806 aaPredicted RBP27.57■■■□□ 2
UPK3B-201ENST00000257632 CCDC144AA2RUR9 1427 aa27.57■■■□□ 2
UPK3B-201ENST00000257632 UBAP1LF5GYI3 381 aa27.56■■■□□ 2
UPK3B-201ENST00000257632 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
UPK3B-201ENST00000257632 PLEKHG1Q9ULL1 1385 aa27.54■■■□□ 2
UPK3B-201ENST00000257632 TRIM26Q12899 539 aaPredicted RBP27.52■■■□□ 2
UPK3B-201ENST00000257632 SLC26A8Q96RN1 970 aa27.52■■■□□ 2
UPK3B-201ENST00000257632 ILDR2Q71H61 639 aa27.51■■□□□ 1.99
UPK3B-201ENST00000257632 CPS1P31327 1500 aa27.51■■□□□ 1.99
UPK3B-201ENST00000257632 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
UPK3B-201ENST00000257632 STRCP1A6NGW2 1772 aa27.45■■□□□ 1.98
UPK3B-201ENST00000257632 RPGRIP1LQ68CZ1 1315 aa27.42■■□□□ 1.98
UPK3B-201ENST00000257632 RGL3Q3MIN7 710 aa27.42■■□□□ 1.98
UPK3B-201ENST00000257632 SCAF1Q9H7N4 1312 aaKnown RBP27.41■■□□□ 1.98
UPK3B-201ENST00000257632 DIP2AQ14689 1571 aa27.41■■□□□ 1.98
UPK3B-201ENST00000257632 TBX22Q9Y458 520 aa27.4■■□□□ 1.98
UPK3B-201ENST00000257632 ANKRD30BQ9BXX2 1392 aa27.39■■□□□ 1.98
UPK3B-201ENST00000257632 VGFO15240 615 aaPredicted RBP27.39■■□□□ 1.98
UPK3B-201ENST00000257632 PPLO60437 1756 aa27.39■■□□□ 1.98
UPK3B-201ENST00000257632 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.97
UPK3B-201ENST00000257632 ADAMTS13Q76LX8 1427 aa27.39■■□□□ 1.97
UPK3B-201ENST00000257632 KCNA6P17658 529 aa27.38■■□□□ 1.97
UPK3B-201ENST00000257632 SETBP1Q9Y6X0 1596 aa27.37■■□□□ 1.97
UPK3B-201ENST00000257632 PIP4K2BP78356 416 aa27.36■■□□□ 1.97
UPK3B-201ENST00000257632 LRRC7Q96NW7 1537 aa27.35■■□□□ 1.97
UPK3B-201ENST00000257632 NRXN3Q9Y4C0 1643 aa27.34■■□□□ 1.97
UPK3B-201ENST00000257632 NWD1Q149M9 1564 aa27.34■■□□□ 1.97
UPK3B-201ENST00000257632 CHD2O14647 1828 aaKnown RBP27.34■■□□□ 1.97
UPK3B-201ENST00000257632 SOCS7O14512 581 aa27.32■■□□□ 1.96
UPK3B-201ENST00000257632 PIK3R4Q99570 1358 aa27.32■■□□□ 1.96
UPK3B-201ENST00000257632 NKTRP30414 1462 aaKnown RBP27.31■■□□□ 1.96
UPK3B-201ENST00000257632 IFT172Q9UG01 1749 aa27.3■■□□□ 1.96
UPK3B-201ENST00000257632 TOM1O60784 492 aa27.29■■□□□ 1.96
UPK3B-201ENST00000257632 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
UPK3B-201ENST00000257632 HSPA1LP34931 641 aa27.26■■□□□ 1.95
UPK3B-201ENST00000257632 ADGRF5Q8IZF2 1346 aa27.25■■□□□ 1.95
UPK3B-201ENST00000257632 TMEM94Q12767 1356 aa27.24■■□□□ 1.95
UPK3B-201ENST00000257632 AMOTL2Q9Y2J4 779 aa27.24■■□□□ 1.95
UPK3B-201ENST00000257632 XIRP1Q702N8 1843 aaKnown RBP27.24■■□□□ 1.95
UPK3B-201ENST00000257632 ALKQ9UM73 1620 aa27.23■■□□□ 1.95
UPK3B-201ENST00000257632 METP08581 1390 aa27.22■■□□□ 1.95
UPK3B-201ENST00000257632 RBM33Q96EV2 1170 aaKnown RBP27.22■■□□□ 1.95
UPK3B-201ENST00000257632 PTPRUQ92729 1446 aa27.22■■□□□ 1.95
UPK3B-201ENST00000257632 SETD1AO15047 1707 aaKnown RBP27.19■■□□□ 1.94
UPK3B-201ENST00000257632 MYOM2P54296 1465 aa27.19■■□□□ 1.94
UPK3B-201ENST00000257632 XRN1Q8IZH2 1706 aaKnown RBP27.18■■□□□ 1.94
UPK3B-201ENST00000257632 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
UPK3B-201ENST00000257632 PIK3C2GO75747 1445 aa27.16■■□□□ 1.94
UPK3B-201ENST00000257632 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
UPK3B-201ENST00000257632 MED1Q15648 1581 aaPredicted RBP27.16■■□□□ 1.94
UPK3B-201ENST00000257632 DCAF11Q8TEB1 546 aa27.15■■□□□ 1.94
UPK3B-201ENST00000257632 MSH6P52701 1360 aa27.14■■□□□ 1.94
UPK3B-201ENST00000257632 KDM2AQ9Y2K7 1162 aa27.14■■□□□ 1.94
UPK3B-201ENST00000257632 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
UPK3B-201ENST00000257632 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
UPK3B-201ENST00000257632 NCOA3Q9Y6Q9 1424 aa27.11■■□□□ 1.93
UPK3B-201ENST00000257632 STAC3Q96MF2 364 aa27.09■■□□□ 1.93
UPK3B-201ENST00000257632 LAMC1P11047 1609 aa27.08■■□□□ 1.93
UPK3B-201ENST00000257632 CFAP70Q5T0N1 1121 aa27.06■■□□□ 1.92
UPK3B-201ENST00000257632 SIN3AQ96ST3 1273 aa27.06■■□□□ 1.92
UPK3B-201ENST00000257632 C14orf93Q9H972 538 aaKnown RBP27.06■■□□□ 1.92
UPK3B-201ENST00000257632 NEUROD1Q13562 356 aa27.05■■□□□ 1.92
UPK3B-201ENST00000257632 TMEM132EQ6IEE7 984 aa27.05■■□□□ 1.92
UPK3B-201ENST00000257632 PTCH1Q13635 1447 aa27.05■■□□□ 1.92
UPK3B-201ENST00000257632 STK26Q9P289 416 aa27.04■■□□□ 1.92
UPK3B-201ENST00000257632 ASXL1Q8IXJ9 1541 aa27.04■■□□□ 1.92
UPK3B-201ENST00000257632 C19orf44Q9H6X5 657 aa27.03■■□□□ 1.92
UPK3B-201ENST00000257632 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
UPK3B-201ENST00000257632 PRAG1Q86YV5 1406 aa27.01■■□□□ 1.91
UPK3B-201ENST00000257632 LRPPRCP42704 1394 aaKnown RBP27.01■■□□□ 1.91
UPK3B-201ENST00000257632 ROBO2Q9HCK4 1378 aa27.01■■□□□ 1.91
UPK3B-201ENST00000257632 ATF3P18847 181 aa27.01■■□□□ 1.91
UPK3B-201ENST00000257632 YTHDC2Q9H6S0 1430 aaKnown RBP26.99■■□□□ 1.91
UPK3B-201ENST00000257632 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
UPK3B-201ENST00000257632 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
UPK3B-201ENST00000257632 KNDC1Q76NI1 1749 aa26.99■■□□□ 1.91
UPK3B-201ENST00000257632 ADGRL3Q9HAR2 1447 aa26.98■■□□□ 1.91
UPK3B-201ENST00000257632 ABCC11Q96J66 1382 aa26.97■■□□□ 1.91
UPK3B-201ENST00000257632 NALCNQ8IZF0 1738 aa26.96■■□□□ 1.91
UPK3B-201ENST00000257632 TECPR2O15040 1411 aa26.96■■□□□ 1.91
UPK3B-201ENST00000257632 SLAIN2Q9P270 581 aa26.95■■□□□ 1.9
UPK3B-201ENST00000257632 DCCP43146 1447 aa26.95■■□□□ 1.9
UPK3B-201ENST00000257632 L3MBTL2Q969R5 705 aa26.94■■□□□ 1.9
UPK3B-201ENST00000257632 FAM135BQ49AJ0 1406 aa26.92■■□□□ 1.9
UPK3B-201ENST00000257632 ROBO1Q9Y6N7 1651 aa26.92■■□□□ 1.9
UPK3B-201ENST00000257632 ADGRB1O14514 1584 aa26.91■■□□□ 1.9
UPK3B-201ENST00000257632 WAPLQ7Z5K2 1190 aa26.9■■□□□ 1.9
UPK3B-201ENST00000257632 KIAA1210Q9ULL0 1709 aa26.87■■□□□ 1.89
UPK3B-201ENST00000257632 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms