RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.45■■■■□ 3.59
TSR3-201ENST00000007390 TRIM52Q96A61 297 aa37.45■■■■□ 3.59
TSR3-201ENST00000007390 SLC26A8Q96RN1 970 aa37.44■■■■□ 3.58
TSR3-201ENST00000007390 TRPM2O94759 1503 aa37.44■■■■□ 3.58
TSR3-201ENST00000007390 PPP1R15AO75807 674 aaPredicted RBP37.42■■■■□ 3.58
TSR3-201ENST00000007390 TOM1O60784 492 aa37.4■■■■□ 3.58
TSR3-201ENST00000007390 KCNA6P17658 529 aa37.38■■■■□ 3.57
TSR3-201ENST00000007390 BCANQ96GW7 911 aa37.36■■■■□ 3.57
TSR3-201ENST00000007390 SLC4A1APQ9BWU0 796 aaKnown RBP37.36■■■■□ 3.57
TSR3-201ENST00000007390 CLTCL1P53675 1640 aa37.36■■■■□ 3.57
TSR3-201ENST00000007390 NWD1Q149M9 1564 aa37.35■■■■□ 3.57
TSR3-201ENST00000007390 ALKQ9UM73 1620 aa37.33■■■■□ 3.57
TSR3-201ENST00000007390 NKTRP30414 1462 aaKnown RBP37.31■■■■□ 3.56
TSR3-201ENST00000007390 TBX22Q9Y458 520 aa37.3■■■■□ 3.56
TSR3-201ENST00000007390 ADAMTS13Q76LX8 1427 aa37.29■■■■□ 3.56
TSR3-201ENST00000007390 DIP2AQ14689 1571 aa37.29■■■■□ 3.56
TSR3-201ENST00000007390 NUTM2DQ5VT03 806 aaPredicted RBP37.28■■■■□ 3.56
TSR3-201ENST00000007390 XIRP1Q702N8 1843 aaKnown RBP37.27■■■■□ 3.56
TSR3-201ENST00000007390 ACIN1Q9UKV3 1341 aaKnown RBP37.26■■■■□ 3.56
TSR3-201ENST00000007390 PIP4K2BP78356 416 aa37.25■■■■□ 3.55
TSR3-201ENST00000007390 SENP3Q9H4L4 574 aaPredicted RBP37.25■■■■□ 3.55
TSR3-201ENST00000007390 TMEM94Q12767 1356 aa37.24■■■■□ 3.55
TSR3-201ENST00000007390 SETD5Q9C0A6 1442 aa37.23■■■■□ 3.55
TSR3-201ENST00000007390 SCAF1Q9H7N4 1312 aaKnown RBP37.22■■■■□ 3.55
TSR3-201ENST00000007390 ZNF326Q5BKZ1 582 aaKnown RBP37.22■■■■□ 3.55
TSR3-201ENST00000007390 CHD2O14647 1828 aaKnown RBP37.22■■■■□ 3.55
TSR3-201ENST00000007390 PIK3R4Q99570 1358 aa37.21■■■■□ 3.55
TSR3-201ENST00000007390 KIF1BO60333 1816 aa37.21■■■■□ 3.55
TSR3-201ENST00000007390 NEXMIFQ5QGS0 1516 aa37.2■■■■□ 3.55
TSR3-201ENST00000007390 PROSER2Q86WR7 435 aaPredicted RBP37.19■■■■□ 3.54
TSR3-201ENST00000007390 SETBP1Q9Y6X0 1596 aa37.19■■■■□ 3.54
TSR3-201ENST00000007390 MPHOSPH9Q99550 1183 aa37.17■■■■□ 3.54
TSR3-201ENST00000007390 NRXN3Q9Y4C0 1643 aa37.15■■■■□ 3.54
TSR3-201ENST00000007390 FOXD1Q16676 465 aa37.12■■■■□ 3.53
TSR3-201ENST00000007390 HSPA1LP34931 641 aa37.11■■■■□ 3.53
TSR3-201ENST00000007390 RAB3GAP2Q9H2M9 1393 aa37.09■■■■□ 3.53
TSR3-201ENST00000007390 RBM33Q96EV2 1170 aaKnown RBP37.07■■■■□ 3.52
TSR3-201ENST00000007390 CCDC144AA2RUR9 1427 aa37.07■■■■□ 3.52
TSR3-201ENST00000007390 NCOA3Q9Y6Q9 1424 aa37.07■■■■□ 3.52
TSR3-201ENST00000007390 RPGRIP1LQ68CZ1 1315 aa37.07■■■■□ 3.52
TSR3-201ENST00000007390 PTPRUQ92729 1446 aa37.04■■■■□ 3.52
TSR3-201ENST00000007390 MSH6P52701 1360 aa37.04■■■■□ 3.52
TSR3-201ENST00000007390 VGFO15240 615 aaPredicted RBP37.02■■■■□ 3.52
TSR3-201ENST00000007390 AMOTL2Q9Y2J4 779 aa37■■■■□ 3.51
TSR3-201ENST00000007390 FAM135BQ49AJ0 1406 aa37■■■■□ 3.51
TSR3-201ENST00000007390 XRN1Q8IZH2 1706 aaKnown RBP36.99■■■■□ 3.51
TSR3-201ENST00000007390 METP08581 1390 aa36.98■■■■□ 3.51
TSR3-201ENST00000007390 SPATA31E1Q6ZUB1 1445 aa36.98■■■■□ 3.51
TSR3-201ENST00000007390 PPLO60437 1756 aa36.96■■■■□ 3.51
TSR3-201ENST00000007390 DISP3Q9P2K9 1392 aa36.93■■■■□ 3.5
TSR3-201ENST00000007390 HRCP23327 699 aa36.92■■■■□ 3.5
TSR3-201ENST00000007390 SETD1AO15047 1707 aaKnown RBP36.88■■■■□ 3.49
TSR3-201ENST00000007390 C14orf37Q86TY3 774 aa36.87■■■■□ 3.49
TSR3-201ENST00000007390 C19orf44Q9H6X5 657 aa36.87■■■■□ 3.49
TSR3-201ENST00000007390 SLAIN2Q9P270 581 aa36.86■■■■□ 3.49
TSR3-201ENST00000007390 ROBO1Q9Y6N7 1651 aa36.86■■■■□ 3.49
TSR3-201ENST00000007390 ANKRD30BQ9BXX2 1392 aa36.85■■■■□ 3.49
TSR3-201ENST00000007390 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.84■■■■□ 3.49
TSR3-201ENST00000007390 RGL3Q3MIN7 710 aa36.83■■■■□ 3.49
TSR3-201ENST00000007390 IFT172Q9UG01 1749 aa36.82■■■■□ 3.49
TSR3-201ENST00000007390 CADPS2Q86UW7 1296 aa36.82■■■■□ 3.48
TSR3-201ENST00000007390 DCCP43146 1447 aa36.81■■■■□ 3.48
TSR3-201ENST00000007390 PRAG1Q86YV5 1406 aa36.81■■■■□ 3.48
TSR3-201ENST00000007390 ADGRF5Q8IZF2 1346 aa36.79■■■■□ 3.48
TSR3-201ENST00000007390 PTCH1Q13635 1447 aa36.78■■■■□ 3.48
TSR3-201ENST00000007390 ATF3P18847 181 aa36.78■■■■□ 3.48
TSR3-201ENST00000007390 MED1Q15648 1581 aaPredicted RBP36.77■■■■□ 3.48
TSR3-201ENST00000007390 ADGRL3Q9HAR2 1447 aa36.73■■■■□ 3.47
TSR3-201ENST00000007390 PIK3C2GO75747 1445 aa36.71■■■■□ 3.47
TSR3-201ENST00000007390 ROBO2Q9HCK4 1378 aa36.69■■■■□ 3.46
TSR3-201ENST00000007390 MYOM2P54296 1465 aa36.67■■■■□ 3.46
TSR3-201ENST00000007390 NALCNQ8IZF0 1738 aa36.66■■■■□ 3.46
TSR3-201ENST00000007390 NRXN1Q9ULB1 1477 aa36.65■■■■□ 3.46
TSR3-201ENST00000007390 MST1RQ04912 1400 aa36.63■■■■□ 3.45
TSR3-201ENST00000007390 PHLPP1O60346 1717 aa36.62■■■■□ 3.45
TSR3-201ENST00000007390 TECPR2O15040 1411 aa36.6■■■■□ 3.45
TSR3-201ENST00000007390 ASXL1Q8IXJ9 1541 aa36.6■■■■□ 3.45
TSR3-201ENST00000007390 ILDR2Q71H61 639 aa36.6■■■■□ 3.45
TSR3-201ENST00000007390 AHDC1Q5TGY3 1603 aaPredicted RBP36.59■■■■□ 3.45
TSR3-201ENST00000007390 LRPPRCP42704 1394 aaKnown RBP36.58■■■■□ 3.45
TSR3-201ENST00000007390 BRINP3Q76B58 766 aa36.58■■■■□ 3.45
TSR3-201ENST00000007390 COL16A1Q07092 1604 aaPredicted RBP36.57■■■■□ 3.44
TSR3-201ENST00000007390 ABCC11Q96J66 1382 aa36.55■■■■□ 3.44
TSR3-201ENST00000007390 C14orf93Q9H972 538 aaKnown RBP36.55■■■■□ 3.44
TSR3-201ENST00000007390 LAMC1P11047 1609 aa36.54■■■■□ 3.44
TSR3-201ENST00000007390 KNDC1Q76NI1 1749 aa36.52■■■■□ 3.44
TSR3-201ENST00000007390 JCADQ9P266 1359 aa36.52■■■■□ 3.44
TSR3-201ENST00000007390 TMEM132EQ6IEE7 984 aa36.5■■■■□ 3.43
TSR3-201ENST00000007390 YTHDC2Q9H6S0 1430 aaKnown RBP36.5■■■■□ 3.43
TSR3-201ENST00000007390 STK26Q9P289 416 aa36.49■■■■□ 3.43
TSR3-201ENST00000007390 PHF23Q9BUL5 403 aaPredicted RBP36.47■■■■□ 3.43
TSR3-201ENST00000007390 C1orf167Q5SNV9 1468 aa36.47■■■■□ 3.43
TSR3-201ENST00000007390 CFAP70Q5T0N1 1121 aa36.46■■■■□ 3.43
TSR3-201ENST00000007390 STAC3Q96MF2 364 aa36.46■■■■□ 3.43
TSR3-201ENST00000007390 CDC42BPGQ6DT37 1551 aa36.45■■■■□ 3.43
TSR3-201ENST00000007390 NHSL1Q5SYE7 1610 aa36.44■■■■□ 3.42
TSR3-201ENST00000007390 SIRT1Q96EB6 747 aa36.42■■■■□ 3.42
TSR3-201ENST00000007390 DHX57Q6P158 1386 aaKnown RBP36.41■■■■□ 3.42
TSR3-201ENST00000007390 WAPLQ7Z5K2 1190 aa36.4■■■■□ 3.42
TSR3-201ENST00000007390 DCAF11Q8TEB1 546 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms