RNA–Protein interactions for RNA: ENSMUST00000222454.1

Ush1c-209, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ush1c, Length 2,580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-209ENSMUST00000222454 Kdm5cP41230 1554 aa16.59■□□□□ 0.25
Ush1c-209ENSMUST00000222454 Srcin1Q9QWI6 1250 aa16.59■□□□□ 0.25
Ush1c-209ENSMUST00000222454 Prex1Q69ZK0 1650 aa16.59■□□□□ 0.25
Ush1c-209ENSMUST00000222454 Gm20521D3Z5F7 333 aa16.59■□□□□ 0.25
Ush1c-209ENSMUST00000222454 Yeats2Q3TUF7 1407 aa16.59■□□□□ 0.25
Ush1c-209ENSMUST00000222454 Tmem131lQ3U3D7 1597 aa16.58■□□□□ 0.25
Ush1c-209ENSMUST00000222454 Dip2cE9PWR4 1557 aa16.57■□□□□ 0.24
Ush1c-209ENSMUST00000222454 AatkQ80YE4 1365 aa16.57■□□□□ 0.24
Ush1c-209ENSMUST00000222454 PrxO55103 1391 aa16.57■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Atp10aO54827 1508 aa16.56■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Rpgrip1lQ8CG73 1264 aa16.56■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Uggt2E9Q4X2 1504 aa16.55■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Iqgap3F8VQ29 1632 aa16.55■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Q7TT23 1179 aa16.55■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Slc4a1apE9PX68 744 aa16.54■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Topbp1Q6ZQF0 1515 aa16.54■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Clasp1Q80TV8 1535 aaKnown RBP16.54■□□□□ 0.24
Ush1c-209ENSMUST00000222454 AglF8VPN4 1532 aa16.53■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Srpk2O54781 681 aaKnown RBP16.53■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Hdac5Q9Z2V6 1113 aa16.53■□□□□ 0.24
Ush1c-209ENSMUST00000222454 Egfem1Q8C088 590 aa16.53■□□□□ 0.24
Ush1c-209ENSMUST00000222454 RereQ80TZ9 1558 aa16.52■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Usp40Q8BWR4 1235 aa16.51■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Prdm10Q3UTQ7 1184 aa16.51■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Myo3aQ8K3H5 1613 aa16.51■□□□□ 0.23
Ush1c-209ENSMUST00000222454 AU022751B1B0V2 589 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Zscan10Q3URR7 782 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Ttbk1Q6PCN3 1308 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Abca8aQ8K442 1620 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 AdgbG3UZ78 1657 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Tubgcp6G5E8P0 1769 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Setd1aE9PYH6 1716 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Plch2A2AP18 1501 aa16.48■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Cdc42bpgQ80UW5 1551 aa16.47■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Gtf2e1Q9D0D5 440 aa16.47■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Adgrb3Q80ZF8 1522 aa16.46■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Tmf1B9EKI3 1091 aa16.46■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Cnga1P29974 684 aa16.46■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Ofd1Q80Z25 1017 aa16.46■□□□□ 0.23
Ush1c-209ENSMUST00000222454 Puf60Q3UEB3 564 aaKnown RBP16.45■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Cfap65Q3V0B4 1847 aa16.45■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Slc4a3P16283 1227 aa16.44■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Afap1Q80YS6 731 aa16.43■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Rims1Q99NE5 1463 aa16.43■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Fam184bQ0KK56 942 aa16.42■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Cul9Q80TT8 1865 aa16.41■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Ehbp1l1Q99MS7 1716 aa16.4■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Pola1P33609 1465 aa16.4■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Zscan21Q07231 555 aa16.39■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Atp1b4Q99ME6 356 aa16.39■□□□□ 0.22
Ush1c-209ENSMUST00000222454 Plppr3Q7TPB0 716 aa16.39■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Dnajc5gQ8C632 165 aa16.39■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Gm16486A0A1D5RMD1 1434 aa16.39■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Rad21Q61550 635 aaKnown RBP16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Cdk5rap2Q8K389 1822 aa16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Stag3O70576 1240 aa16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Stk26Q99JT2 416 aa16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Anp32bQ9EST5 272 aaKnown RBP16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Cep152A2AUM9 1736 aaKnown RBP16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Kiaa0556Q8C753 1610 aa16.38■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Ttc37F8VPK0 1563 aa16.37■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Sbno1Q689Z5 1390 aa16.37■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Ccdc27Q3V036 639 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Efcab6Q6P1E8 1516 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Trpm1Q2TV84 1622 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Knl1Q66JQ7 1612 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Kcnh8P59111 1102 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 L3mbtl2P59178 703 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Skint5A7XUY5 1461 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Ino80Q6ZPV2 1559 aa16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Prdm2A2A7B5 1709 aaKnown RBP16.36■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Ppp2r1aQ76MZ3 589 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Zranb1Q7M760 708 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Nphp4P59240 1425 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Esx1O88933 382 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Dcaf11Q91VU6 549 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Talpid3E9PV87 1520 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Tecpr2Q3UH45 1423 aa16.35■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Upf2A2AT37 1269 aaKnown RBP16.34■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Myom2Q14BI5 1463 aa16.34■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Synj2Q9D2G5 1434 aa16.34■□□□□ 0.21
Ush1c-209ENSMUST00000222454 Akap12Q9WTQ5 1684 aa16.33■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Kif7B7ZNG0 1348 aa16.33■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Zfp444Q3TDV8 331 aaKnown RBP16.32■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Shq1Q7TMX5 569 aa16.32■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Itsn2Q9Z0R6 1659 aa16.31■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Ipo9Q91YE6 1041 aa16.31■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Hecw2Q6I6G8 1578 aa16.31■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Prrc2bQ7TPM1 1486 aaKnown RBP16.3■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Mroh1E0CZ22 1640 aa16.3■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Mak16Q8BGS0 296 aaKnown RBP16.3■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Stard8Q8K031 1019 aa16.29■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Lrrc7Q80TE7 1490 aa16.29■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Q9D9H8 365 aa16.29■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Hfm1D3Z4R1 1434 aa16.28■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Tcerg1Q8CGF7 1100 aaKnown RBP16.28■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Tex14Q7M6U3 1450 aa16.28■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Erbb3Q61526 1339 aa16.28■□□□□ 0.2
Ush1c-209ENSMUST00000222454 CrbnQ8C7D2 445 aa16.27■□□□□ 0.2
Ush1c-209ENSMUST00000222454 Rab3gap2Q8BMG7 1366 aa16.27■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms