RNA–Protein interactions for RNA: ENSMUST00000222454.1

Ush1c-209, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ush1c, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-209ENSMUST00000222454 NischQ80TM9 1593 aa24.43■■□□□ 1.5
Ush1c-209ENSMUST00000222454 Gm35339A0A140LHH9 1649 aa23.98■■□□□ 1.43
Ush1c-209ENSMUST00000222454 Abcc9P70170 1546 aa23.65■■□□□ 1.38
Ush1c-209ENSMUST00000222454 Abcc8B2RUS7 1588 aa23.27■■□□□ 1.32
Ush1c-209ENSMUST00000222454 Rhox8Q6VSS7 320 aa22.55■■□□□ 1.2
Ush1c-209ENSMUST00000222454 ScribQ80U72 1612 aa21.89■■□□□ 1.1
Ush1c-209ENSMUST00000222454 Dcaf1Q80TR8 1506 aa21.46■■□□□ 1.03
Ush1c-209ENSMUST00000222454 Rtl1Q7M732 1744 aa21.45■■□□□ 1.02
Ush1c-209ENSMUST00000222454 Kdm5dQ62240 1548 aa21.42■■□□□ 1.02
Ush1c-209ENSMUST00000222454 Rb1cc1Q9ESK9 1588 aa21.38■■□□□ 1.01
Ush1c-209ENSMUST00000222454 NacadQ5SWP3 1504 aa21.2■□□□□ 0.98
Ush1c-209ENSMUST00000222454 Ccdc180J3QNE4 1664 aa21.11■□□□□ 0.97
Ush1c-209ENSMUST00000222454 Zcchc6Q5BLK4 1491 aaKnown RBP21.08■□□□□ 0.96
Ush1c-209ENSMUST00000222454 Baz1aO88379 1555 aa21.07■□□□□ 0.96
Ush1c-209ENSMUST00000222454 Ccdc136Q3TVA9 1136 aa21.02■□□□□ 0.96
Ush1c-209ENSMUST00000222454 Sycp2Q9CUU3 1500 aa20.78■□□□□ 0.92
Ush1c-209ENSMUST00000222454 Crybg2B7ZCC2 1516 aa20.6■□□□□ 0.89
Ush1c-209ENSMUST00000222454 Smarca2Q6DIC0 1577 aa20.58■□□□□ 0.88
Ush1c-209ENSMUST00000222454 Rpgrip1Q9EPQ2 1331 aa20.47■□□□□ 0.87
Ush1c-209ENSMUST00000222454 BicraF8VPZ9 1578 aa20.42■□□□□ 0.86
Ush1c-209ENSMUST00000222454 Trim41Q5NCC3 630 aa20.35■□□□□ 0.85
Ush1c-209ENSMUST00000222454 Cecr2E9Q2Z1 1453 aa20.34■□□□□ 0.85
Ush1c-209ENSMUST00000222454 HrcG5E8J6 738 aa20.26■□□□□ 0.83
Ush1c-209ENSMUST00000222454 Cngb1E1AZ71 1325 aa20.07■□□□□ 0.8
Ush1c-209ENSMUST00000222454 Brd4Q9ESU6 1400 aaKnown RBP20.06■□□□□ 0.8
Ush1c-209ENSMUST00000222454 Acin1Q9JIX8 1338 aaKnown RBP20.05■□□□□ 0.8
Ush1c-209ENSMUST00000222454 Synj1Q8CHC4 1574 aa20.03■□□□□ 0.8
Ush1c-209ENSMUST00000222454 Ehmt2Q9Z148 1263 aaKnown RBP19.95■□□□□ 0.78
Ush1c-209ENSMUST00000222454 CftrP26361 1476 aa19.91■□□□□ 0.78
Ush1c-209ENSMUST00000222454 Chic1Q8CBW7 227 aa19.91■□□□□ 0.78
Ush1c-209ENSMUST00000222454 Esf1Q3V1V3 845 aaKnown RBP19.89■□□□□ 0.77
Ush1c-209ENSMUST00000222454 Rsf1E9PWW9 1441 aaKnown RBP19.83■□□□□ 0.77
Ush1c-209ENSMUST00000222454 Cep164Q5DU05 1446 aa19.81■□□□□ 0.76
Ush1c-209ENSMUST00000222454 Golga3P55937 1487 aa19.8■□□□□ 0.76
Ush1c-209ENSMUST00000222454 Smarca4Q3TKT4 1613 aaKnown RBP19.8■□□□□ 0.76
Ush1c-209ENSMUST00000222454 Ccdc88bQ4QRL3 1481 aa19.77■□□□□ 0.76
Ush1c-209ENSMUST00000222454 Gab3Q8BSM5 595 aa19.75■□□□□ 0.75
Ush1c-209ENSMUST00000222454 Cttnbp2B9EJA2 1648 aa19.72■□□□□ 0.75
Ush1c-209ENSMUST00000222454 Iqgap2Q3UQ44 1575 aa19.6■□□□□ 0.73
Ush1c-209ENSMUST00000222454 Pcgf6Q99NA9 353 aa19.58■□□□□ 0.72
Ush1c-209ENSMUST00000222454 Top2bQ64511 1612 aa19.56■□□□□ 0.72
Ush1c-209ENSMUST00000222454 Atad2bE9Q166 1460 aaKnown RBP19.54■□□□□ 0.72
Ush1c-209ENSMUST00000222454 Cc2d2aQ8CFW7 1633 aa19.49■□□□□ 0.71
Ush1c-209ENSMUST00000222454 Pds5bQ4VA53 1446 aaKnown RBP19.47■□□□□ 0.71
Ush1c-209ENSMUST00000222454 Frmpd1A2AKB4 1549 aa19.3■□□□□ 0.68
Ush1c-209ENSMUST00000222454 Fmn1Q05860 1466 aa19.29■□□□□ 0.68
Ush1c-209ENSMUST00000222454 Wdr62Q3U3T8 1523 aa19.24■□□□□ 0.67
Ush1c-209ENSMUST00000222454 Top2aQ01320 1528 aaKnown RBP19.18■□□□□ 0.66
Ush1c-209ENSMUST00000222454 Ercc6F8VPZ5 1481 aa19.14■□□□□ 0.65
Ush1c-209ENSMUST00000222454 Supt5hO55201 1082 aaKnown RBP19.13■□□□□ 0.65
Ush1c-209ENSMUST00000222454 Il27Q8K3I6 234 aa19.11■□□□□ 0.65
Ush1c-209ENSMUST00000222454 Myt1lP97500 1187 aa19.09■□□□□ 0.65
Ush1c-209ENSMUST00000222454 Rapgef2Q8CHG7 1496 aa19.08■□□□□ 0.65
Ush1c-209ENSMUST00000222454 Kif15Q6P9L6 1387 aa19.05■□□□□ 0.64
Ush1c-209ENSMUST00000222454 Npm2Q80W85 207 aa19.05■□□□□ 0.64
Ush1c-209ENSMUST00000222454 TnnQ80Z71 1560 aa19.03■□□□□ 0.64
Ush1c-209ENSMUST00000222454 Unc13aQ4KUS2 1712 aa19.03■□□□□ 0.64
Ush1c-209ENSMUST00000222454 Cep162Q6ZQ06 1403 aa18.99■□□□□ 0.63
Ush1c-209ENSMUST00000222454 Lamc3Q9R0B6 1581 aa18.96■□□□□ 0.63
Ush1c-209ENSMUST00000222454 Thoc2B1AZI6 1594 aaKnown RBP18.93■□□□□ 0.62
Ush1c-209ENSMUST00000222454 PtprkP35822 1457 aa18.92■□□□□ 0.62
Ush1c-209ENSMUST00000222454 Ubl4bQ9CQ84 188 aa18.88■□□□□ 0.61
Ush1c-209ENSMUST00000222454 Phldb1Q6PDH0 1371 aaKnown RBP18.87■□□□□ 0.61
Ush1c-209ENSMUST00000222454 Neurod1Q60867 357 aa18.86■□□□□ 0.61
Ush1c-209ENSMUST00000222454 Camsap1A2AHC3 1581 aa18.82■□□□□ 0.6
Ush1c-209ENSMUST00000222454 UbtfP25976 765 aaKnown RBP18.79■□□□□ 0.6
Ush1c-209ENSMUST00000222454 Mier1Q5UAK0 511 aa18.79■□□□□ 0.6
Ush1c-209ENSMUST00000222454 Cux2P70298 1426 aa18.78■□□□□ 0.6
Ush1c-209ENSMUST00000222454 Eif4g1Q6NZJ6 1600 aaKnown RBP18.77■□□□□ 0.6
Ush1c-209ENSMUST00000222454 Arhgap35Q91YM2 1499 aa18.75■□□□□ 0.59
Ush1c-209ENSMUST00000222454 Dnajc5bQ9CQ94 199 aa18.74■□□□□ 0.59
Ush1c-209ENSMUST00000222454 Ccdc18Q640L5 1455 aa18.74■□□□□ 0.59
Ush1c-209ENSMUST00000222454 Zeb1Q64318 1117 aa18.71■□□□□ 0.59
Ush1c-209ENSMUST00000222454 NrkQ9R0G8 1455 aa18.7■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Npm1Q61937 292 aaKnown RBP18.7■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Grin2bQ01097 1482 aa18.7■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Shroom4Q1W617 1475 aa18.69■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Plekhg3Q4VAC9 1341 aa18.69■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Clip1Q922J3 1391 aa18.68■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Fam135aQ6NS59 1506 aa18.67■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Ap3b1Q9Z1T1 1105 aa18.65■□□□□ 0.58
Ush1c-209ENSMUST00000222454 Baz1bQ9Z277 1479 aa18.57■□□□□ 0.56
Ush1c-209ENSMUST00000222454 LrpprcQ6PB66 1392 aaKnown RBP18.56■□□□□ 0.56
Ush1c-209ENSMUST00000222454 NefmP08553 848 aa18.53■□□□□ 0.56
Ush1c-209ENSMUST00000222454 Arap1Q4LDD4 1452 aa18.52■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Mroh2bQ7M6Y6 1581 aa18.51■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Sall2Q9QX96 1004 aa18.5■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Setd5Q5XJV7 1441 aa18.5■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Duox2A2AQ99 1517 aa18.49■□□□□ 0.55
Ush1c-209ENSMUST00000222454 PogzQ8BZH4 1409 aaKnown RBP18.49■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Eea1Q8BL66 1411 aa18.48■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Map3k1P53349 1493 aa18.47■□□□□ 0.55
Ush1c-209ENSMUST00000222454 Dhx29Q6PGC1 1365 aaKnown RBP18.45■□□□□ 0.54
Ush1c-209ENSMUST00000222454 Efcab5A0JP43 1406 aa18.44■□□□□ 0.54
Ush1c-209ENSMUST00000222454 Las1lA2BE28 776 aaKnown RBP18.4■□□□□ 0.54
Ush1c-209ENSMUST00000222454 Samd9lQ69Z37 1561 aa18.38■□□□□ 0.53
Ush1c-209ENSMUST00000222454 Rad54l2Q99NG0 1466 aa18.37■□□□□ 0.53
Ush1c-209ENSMUST00000222454 Arhgef5E9Q7D5 1581 aa18.36■□□□□ 0.53
Ush1c-209ENSMUST00000222454 Mrc2Q64449 1479 aa18.35■□□□□ 0.53
Ush1c-209ENSMUST00000222454 Ankrd26Q811D2 1581 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms