RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Ssh1Q76I79 1042 aa11.32□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Ipo8Q7TMY7 1010 aa11.32□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Atp10dQ8K2X1 1416 aa11.32□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Abcc5Q9R1X5 1436 aa11.31□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Fam114a1Q9D281 569 aa11.31□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Q7TT23 1179 aa11.31□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Mknk2Q8CDB0 459 aa11.31□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Mlh3A0A1Y7VMP7 1443 aa11.31□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Kiaa0753Q6A000 959 aa11.3□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Vps8Q0P5W1 1427 aa11.3□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Ppp1r18Q8BQ30 594 aa11.3□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Arhgap5P97393 1501 aa11.3□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Mapkbp1Q6NS57 1503 aa11.3□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Ppp1r9bQ6R891 817 aaKnown RBP11.3□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Esx1O88933 382 aa11.29□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Gse1Q3U3C9 1213 aa11.29□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Mkrn3Q60764 544 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Speer4f1Q9D5Q6 258 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Kiaa1551Q5DTW7 1521 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Mroh2aD3Z750 1679 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Q4VA45 678 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Arhgef40Q3UPH7 1517 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Lemd3Q9WU40 921 aa11.28□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Clstn2Q9ER65 966 aa11.27□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Tnpo1Q8BFY9 898 aaKnown RBP11.27□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Caskin1Q6P9K8 1431 aa11.27□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 PtprtQ99M80 1454 aa11.27□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Zfp444Q3TDV8 331 aaKnown RBP11.26□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Il16O54824 1322 aa11.26□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Gcc2Q8CHG3 1679 aa11.26□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Mphosph9A6H5Y1 991 aa11.26□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Adcy10Q8C0T9 1614 aa11.26□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Kcnj4P52189 445 aa11.24□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Wdr7Q920I9 1489 aa11.24□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Chd1P40201 1711 aa11.24□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Zfp644E9QA22 1323 aa11.24□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Pank2Q3U4S0 443 aa11.24□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Antxr1Q9CZ52 562 aa11.24□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Ccdc183A2AJB1 534 aa11.23□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 AI481877A2ALV5 1481 aa11.23□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Map4P27546 1125 aaKnown RBP11.23□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Brd2Q7JJ13 798 aaKnown RBP11.23□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Cdc42bpaQ3UU96 1719 aa11.23□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Ush1cQ9ES64 910 aa11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Cep170Q6A065 1588 aa11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Gzf1Q4VBD9 706 aa11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Q8BT18 775 aa11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Bms1Q6PGF5 1284 aaKnown RBP11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Dcaf11Q91VU6 549 aa11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Kank1E9Q238 1360 aa11.22□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Pank3Q8R2W9 370 aa11.21□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Trappc8E9PWG2 1437 aa11.21□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Pkd2O35245 966 aa11.21□□□□□ -0.61
Prpf40a-208ENSMUST00000210789 Znf608Q56A10 1511 aa11.21□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Ccdc94Q9D6J3 314 aa11.21□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Rfx7F8VPJ6 1459 aa11.21□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Nup155Q99P88 1391 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Zcchc11B2RX14 1644 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 MycnP03966 462 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Trak1Q6PD31 939 aa11.2□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 MsnP26041 577 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 MlecQ6ZQI3 291 aaKnown RBP11.19□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Atp2b3Q0VF55 1220 aa11.19□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Catsper2A2ARP9 588 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Sptbn5F6UCX4 1208 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Kank4Q6P9J5 1016 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Prdm4Q80V63 803 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 KarsQ99MN1 595 aaKnown RBP11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Adgrl3Q80TS3 1537 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 PtmaP26350 111 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Map3k5O35099 1380 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Prdm16A2A935 1275 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Erich4Q3UNU4 136 aa11.18□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Kdm6bQ5NCY0 1641 aa11.17□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Becn1O88597 448 aa11.17□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Ankrd36D3Z4K0 1415 aa11.17□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 NhsB1AV60 1647 aa11.17□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Spag9Q58A65 1321 aaKnown RBP11.17□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Kdm2bQ6P1G2 1309 aa11.16□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Cald1E9QA15 768 aaKnown RBP11.16□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Sh3bp1P55194 680 aa11.16□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Erich6D3Z6S9 713 aa11.16□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Rfx1P48377 963 aa11.16□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Serpina10Q8R121 448 aa11.16□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Kif3bQ61771 747 aa11.15□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Lrrc9Q8CDN9 1456 aa11.15□□□□□ -0.62
Prpf40a-208ENSMUST00000210789 Prr29B1ARI9 187 aa11.15□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Dmrt2Q8BG36 561 aa11.15□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Ercc6lQ8BHK9 1240 aa11.15□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Zmynd15Q8C0R7 736 aa11.15□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Rpgrip1lQ8CG73 1264 aa11.15□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Adgrb2Q8CGM1 1561 aa11.14□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Mink1Q9JM52 1308 aa11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Fam208aQ69ZR9 1610 aaKnown RBP11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Ubap1lG3UW59 384 aa11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Rgl3Q3UYI5 709 aa11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Kdm3bQ6ZPY7 1562 aa11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Smc5Q8CG46 1101 aaKnown RBP11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Gpatch11Q3UFS4 262 aa11.13□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Cfap74Q3UY96 1578 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms