RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Fmn2Q9JL04 1578 aa11.92□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Puf60Q3UEB3 564 aaKnown RBP11.91□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Edc4Q3UJB9 1406 aaKnown RBP11.91□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Trpm2Q91YD4 1506 aa11.91□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Plin1Q8CGN5 517 aa11.91□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 ErbinQ80TH2 1402 aa11.91□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Ptch1Q61115 1434 aa11.9□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Mink1Q9JM52 1308 aa11.9□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Gas2l2Q5SSG4 860 aa11.89□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Lamc1P02468 1607 aaKnown RBP11.89□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Ccdc27Q3V036 639 aa11.88□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Exosc9Q9JHI7 438 aaKnown RBP11.88□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Rrbp1Q99PL5 1605 aaKnown RBP11.88□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Gm156Q58A37 223 aa11.88□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Adgrl2Q8JZZ7 1487 aa11.88□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Gm32742A0A1B0GT42 1604 aa11.87□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Gapvd1Q6PAR5 1458 aa11.87□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Shq1Q7TMX5 569 aa11.87□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Amer1Q7TS75 1132 aa11.87□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Afap1Q80YS6 731 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Ipo9Q91YE6 1041 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Q9D9H8 365 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Rock1P70335 1354 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Nsd2Q8BVE8 1365 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Usp54Q8BL06 1588 aaKnown RBP11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Atxn3Q9CVD2 355 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Cdc42bpbQ7TT50 1713 aa11.86□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Cpsf1Q9EPU4 1441 aaKnown RBP11.85□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Chd1P40201 1711 aa11.85□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Apaf1O88879 1249 aa11.85□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 NgefQ8CHT1 710 aa11.84□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Asxl2Q8BZ32 1370 aa11.84□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Kif16bB1AVY7 1312 aa11.84□□□□□ -0.51
Hmgcs1-201ENSMUST00000179869 Adamts13Q769J6 1426 aa11.83□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Upf2A2AT37 1269 aaKnown RBP11.82□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Abcc6Q9R1S7 1498 aa11.82□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Igf1rQ60751 1373 aa11.82□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 CanxP35564 591 aaKnown RBP11.82□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 4930567H17RikQ3V0K5 233 aa11.82□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 IqubQ8CDK3 788 aa11.81□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Tulp4Q9JIL5 1547 aa11.81□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Cep170Q6A065 1588 aa11.81□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Golga2Q921M4 999 aa11.81□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 U2af1Q9D883 239 aaKnown RBP11.81□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Utp14aQ640M1 767 aaKnown RBP11.81□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 AatkQ80YE4 1365 aa11.8□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 NhsB1AV60 1647 aa11.8□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 AU022751B1B0V2 589 aa11.8□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Znf330Q922H9 316 aa11.8□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Mast1Q9R1L5 1570 aa11.79□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Hsp90aa1P07901 733 aaKnown RBP11.79□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Kif21bQ9QXL1 1668 aa11.79□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Birc3O08863 600 aa11.79□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Pank1Q8K4K6 548 aa11.79□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Tspyl2Q7TQI8 677 aa11.78□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Ccdc30Q8BVF4 654 aa11.78□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Ylpm1Q9R0I7 1386 aaKnown RBP11.78□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Dnajc5gQ8C632 165 aa11.77□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Hdac5Q9Z2V6 1113 aa11.77□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Rnf17Q99MV7 1640 aa11.77□□□□□ -0.52
Hmgcs1-201ENSMUST00000179869 Rab3gap2Q8BMG7 1366 aa11.77□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Abcc3B2RX12 1523 aa11.76□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Kidins220E9Q9B7 1793 aa11.76□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Kdm5cP41230 1554 aa11.76□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Cfap74Q3UY96 1578 aa11.76□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Yeats2Q3TUF7 1407 aa11.76□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Ttll13A4Q9F6 804 aa11.76□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Adgrl3Q80TS3 1537 aa11.75□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 OvosQ3UU35 1456 aa11.75□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Abca8bQ8K440 1620 aa11.75□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Rwdd1Q9CQK7 243 aa11.75□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 ShprhQ7TPQ3 1674 aa11.75□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Sox12Q04890 314 aa11.74□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 P2rx7Q9Z1M0 595 aa11.74□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Zfyve16Q80U44 1528 aa11.74□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Tsen2Q6P7W5 460 aa11.74□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Txndc2Q6P902 515 aa11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Cluap1Q8R3P7 413 aa11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Iqgap1Q9JKF1 1657 aaKnown RBP11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Kif1bQ60575 1816 aaKnown RBP11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Ksr2Q3UVC0 959 aa11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Atp2b2Q9R0K7 1198 aa11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Myo3aQ8K3H5 1613 aa11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Trim30dE9PWL0 497 aa11.73□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Nutm1Q8BHP2 1126 aa11.72□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 DroshaQ5HZJ0 1373 aaKnown RBP11.72□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Gm6268A2A3U9 297 aa11.72□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Iqcf3Q9D498 203 aa11.72□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Depdc5P61460 1591 aa11.72□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Abca6Q8K441 1624 aa11.72□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Chmp5Q9D7S9 219 aa11.71□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Gm16486A0A1D5RMD1 1434 aa11.71□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Safb2Q80YR5 991 aaKnown RBP11.71□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 Kiaa1210E9Q0C6 1637 aa11.71□□□□□ -0.53
Hmgcs1-201ENSMUST00000179869 1700019A02RikA0A087WPV9 146 aa11.71□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 GsdmaQ9EST1 446 aa11.71□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Xrn1P97789 1719 aaKnown RBP11.71□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Prkrip1Q9CWV6 186 aaKnown RBP11.7□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Irx6Q9ER75 438 aa11.7□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Sart3Q9JLI8 962 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms