RNA–Protein interactions for RNA: ENSMUST00000163821.1

Shtn1-202, Transcript of Shootin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shtn1, Length 3,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-202ENSMUST00000163821 Trim58Q5NCC9 485 aa15.76■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Ccdc60Q8C4J0 545 aa15.76■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Smc5Q8CG46 1101 aaKnown RBP15.76■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Birc3O08863 600 aa15.75■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Pibf1E9Q6K3 756 aa15.75■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Rab3gap2Q8BMG7 1366 aa15.75■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Fam163aQ8CAA5 168 aa15.74■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Fgd1P52734 960 aa15.74■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Ralbp1Q62172 648 aa15.73■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Lmtk2Q3TYD6 1471 aa15.73■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Chmp4cQ9D7F7 232 aa15.72■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Lmod3E9QA62 571 aa15.72■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Q4VA45 678 aa15.72■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Zranb1Q7M760 708 aa15.72■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Polr3aB2RXC6 1390 aa15.71■□□□□ 0.11
Shtn1-202ENSMUST00000163821 NgefQ8CHT1 710 aa15.71■□□□□ 0.11
Shtn1-202ENSMUST00000163821 Naip6Q9JIB6 1403 aa15.71■□□□□ 0.11
Shtn1-202ENSMUST00000163821 PtmaP26350 111 aa15.7■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Ccar1Q8CH18 1146 aaKnown RBP15.7■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Map7O88735 730 aa15.7■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Ccdc146E9Q9F7 977 aa15.69■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Pknox2Q8BG99 474 aa15.69■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Lemd3Q9WU40 921 aa15.69■□□□□ 0.1
Shtn1-202ENSMUST00000163821 WizO88286 1684 aaKnown RBP15.68■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Aplp1Q03157 653 aa15.68■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Puf60Q3UEB3 564 aaKnown RBP15.68■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Ipo4Q8VI75 1082 aa15.68■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Mink1Q9JM52 1308 aa15.68■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Erich6bQ9D4S6 220 aa15.67■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Pnmal2G3X9N3 661 aa15.67■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Pprc1Q6NZN1 1644 aa15.66■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Magi1Q6RHR9 1471 aa15.66■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Ppp2r3aB2RXC8 1150 aa15.65■□□□□ 0.1
Shtn1-202ENSMUST00000163821 Asxl1P59598 1514 aa15.64■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Ylpm1Q9R0I7 1386 aaKnown RBP15.64■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Ppp1r3fQ9JIG4 799 aa15.64■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Cog6Q8R3I3 657 aa15.64■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Duxf3A0A0N4SV92 674 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Rabep1O35551 862 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 IbspQ61711 324 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Rlbp1Q9Z275 317 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Atp7aQ64430 1491 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Peg3Q3URU2 1571 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Dusp27Q148W8 1138 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Ppp1r9bQ6R891 817 aaKnown RBP15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Cc2d1aQ8K1A6 943 aa15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 KnstrnQ9D9Z1 312 aaKnown RBP15.63■□□□□ 0.09
Shtn1-202ENSMUST00000163821 G3bp1P97855 465 aaKnown RBP15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Disp1Q3TDN0 1521 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Kdm2bQ6P1G2 1309 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 RalgapbQ8BQZ4 1484 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Arhgap5P97393 1501 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Trappc8E9PWG2 1437 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 AlkP97793 1621 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Kdm6bQ5NCY0 1641 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Sptbn5F6UCX4 1208 aa15.62■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Ssh1Q76I79 1042 aa15.6■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Zmym4A2A791 1549 aaKnown RBP15.6■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Kdm3bQ6ZPY7 1562 aa15.6■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Magi3Q9EQJ9 1476 aa15.59■□□□□ 0.09
Shtn1-202ENSMUST00000163821 Rbm25B2RY56 838 aaKnown RBP15.58■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Adcy10Q8C0T9 1614 aa15.58■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Ccdc141E9Q8Q6 1531 aa15.58■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Neo1P97798 1493 aa15.58■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Tfip11Q9ERA6 838 aaKnown RBP15.58■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Utp14aQ640M1 767 aaKnown RBP15.57■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Mrc2Q64449 1479 aa15.57■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Shq1Q7TMX5 569 aa15.57■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Nek4Q9Z1J2 792 aa15.57■□□□□ 0.08
Shtn1-202ENSMUST00000163821 ErbinQ80TH2 1402 aa15.57■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Uspl1Q3ULM6 1089 aa15.56■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Maco1Q7TQE6 664 aaKnown RBP15.56■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Ssh2Q5SW75 1423 aa15.56■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Prex2Q3LAC4 1598 aa15.56■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Paxip1Q6NZQ4 1056 aa15.56■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Kif18aQ91WD7 886 aa15.56■□□□□ 0.08
Shtn1-202ENSMUST00000163821 SphkapQ6NSW3 1687 aa15.55■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Catsper2A2ARP9 588 aa15.54■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Triml2E9PW10 424 aa15.53■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Tnnt1O88346 262 aa15.53■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Kif14L0N7N1 1674 aaKnown RBP15.53■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Cald1E9QA15 768 aaKnown RBP15.52■□□□□ 0.08
Shtn1-202ENSMUST00000163821 Arhgef12Q8R4H2 1543 aaKnown RBP15.52■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Pdcl3Q8BVF2 240 aa15.52■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Hsp90b1P08113 802 aaKnown RBP15.51■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Prdm16A2A935 1275 aa15.51■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Shroom2A2ALU4 1481 aa15.51■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Nsd2Q8BVE8 1365 aa15.5■□□□□ 0.07
Shtn1-202ENSMUST00000163821 AU019823E9PUQ3 292 aa15.5■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Nol12Q8BG17 217 aa15.5■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Atl3Q91YH5 541 aa15.5■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Rapgef6Q5NCJ1 1609 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Q9D9H8 365 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Mcm4P49717 862 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Rsph3aQ3UFY4 516 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Unc13aQ4KUS2 1712 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Cpsf1Q9EPU4 1441 aaKnown RBP15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 CenpjQ569L8 1344 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 SkilQ60665 675 aa15.49■□□□□ 0.07
Shtn1-202ENSMUST00000163821 Stard8Q8K031 1019 aa15.48■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms