RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 AatkQ80YE4 1365 aa10.71□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Tulp4Q9JIL5 1547 aa10.7□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Neurod1Q60867 357 aa10.69□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Naip7Q9JIB3 1402 aa10.69□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Iqgap1Q9JKF1 1657 aaKnown RBP10.69□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Plxnc1Q9QZC2 1574 aa10.69□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Prrc2bQ7TPM1 1486 aaKnown RBP10.68□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Zc3h13E9Q784 1729 aaKnown RBP10.67□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Cdk13Q69ZA1 1511 aaKnown RBP10.67□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Cep152A2AUM9 1736 aaKnown RBP10.67□□□□□ -0.7
Ube4a-204ENSMUST00000138559 GphnQ8BUV3 769 aaKnown RBP10.67□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Adamts13Q769J6 1426 aa10.67□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Rims1Q99NE5 1463 aa10.67□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Ifit1bl1D3Z6F0 470 aa10.66□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Grwd1Q810D6 446 aaKnown RBP10.66□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Mbd5B1AYB6 1498 aa10.66□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Gemin5Q8BX17 1502 aaKnown RBP10.66□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Polr3aB2RXC6 1390 aa10.66□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Cpsf1Q9EPU4 1441 aaKnown RBP10.65□□□□□ -0.7
Ube4a-204ENSMUST00000138559 PplQ9R269 1755 aa10.65□□□□□ -0.7
Ube4a-204ENSMUST00000138559 Txndc2Q6P902 515 aa10.65□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Myom1Q62234 1667 aaKnown RBP10.65□□□□□ -0.71
Ube4a-204ENSMUST00000138559 P3h3Q8CG70 732 aa10.64□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Mug2P28666 1451 aa10.64□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Os9Q8K2C7 672 aa10.63□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Eif2ak4Q9QZ05 1648 aa10.63□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Gm13695A2AK44 830 aa10.63□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Srpk2O54781 681 aaKnown RBP10.62□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Atp1b4Q99ME6 356 aa10.62□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Arid4bA2CG63 1314 aaKnown RBP10.61□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Kdm2aP59997 1161 aa10.61□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Psme1P97371 249 aa10.61□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Myo3aQ8K3H5 1613 aa10.61□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Rimbp3Q3V0F0 1606 aa10.61□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Arhgef28P97433 1693 aa10.61□□□□□ -0.71
Ube4a-204ENSMUST00000138559 AU022751B1B0V2 589 aa10.6□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Dapk1Q80YE7 1442 aa10.6□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Cdk5rap2Q8K389 1822 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Slc52a2Q9D8F3 450 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Lmtk3Q5XJV6 1424 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Gm20521D3Z5F7 333 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Phlpp1Q8CHE4 1687 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Rims2Q9EQZ7 1530 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 RalgapbQ8BQZ4 1484 aa10.59□□□□□ -0.71
Ube4a-204ENSMUST00000138559 Dip2aQ8BWT5 1523 aa10.58□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Cyb5rlB1AS42 316 aa10.58□□□□□ -0.72
Ube4a-204ENSMUST00000138559 PalldQ9ET54 1408 aa10.58□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Setd1aE9PYH6 1716 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Shq1Q7TMX5 569 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Scaf11E9PZM7 1456 aaKnown RBP10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Fan1Q69ZT1 1020 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Ppargc1bQ8VHJ7 1014 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Scn4aQ9ER60 1841 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Rundc1Q0VDN7 615 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Card11Q8CIS0 1159 aa10.57□□□□□ -0.72
Ube4a-204ENSMUST00000138559 MaddQ80U28 1577 aa10.56□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Slit3Q9WVB4 1523 aa10.56□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Q9D9H8 365 aa10.56□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Puf60Q3UEB3 564 aaKnown RBP10.55□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Lrrc7Q80TE7 1490 aa10.55□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Sipa1l1Q8C0T5 1782 aa10.55□□□□□ -0.72
Ube4a-204ENSMUST00000138559 PzpQ61838 1495 aa10.55□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Stard8Q8K031 1019 aa10.54□□□□□ -0.72
Ube4a-204ENSMUST00000138559 Ncoa1P70365 1447 aa10.53□□□□□ -0.72
Ube4a-204ENSMUST00000138559 DnmbpQ6TXD4 1580 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 IqubQ8CDK3 788 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Asxl2Q8BZ32 1370 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Pik3r4Q8VD65 1358 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Nphp4P59240 1425 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Rock2P70336 1388 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Med1Q925J9 1575 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Usp40Q8BWR4 1235 aa10.51□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Cwc22Q8C5N3 908 aaKnown RBP10.5□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Srcin1Q9QWI6 1250 aa10.5□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Ift172Q6VH22 1749 aa10.5□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Wdr66E9Q743 1299 aa10.5□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Nrxn3Q6P9K9 1571 aa10.5□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Stk26Q99JT2 416 aa10.49□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Gtf2e1Q9D0D5 440 aa10.49□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Arap3Q8R5G7 1538 aa10.49□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Utp14aQ640M1 767 aaKnown RBP10.49□□□□□ -0.73
Ube4a-204ENSMUST00000138559 IghaA0A0A6YXW6 389 aa10.49□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Plekhg1F6S200 1446 aa10.49□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Stag3O70576 1240 aa10.48□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Cps1Q8C196 1500 aa10.48□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Pip4k2bQ80XI4 416 aa10.48□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Itsn2Q9Z0R6 1659 aa10.47□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Pola1P33609 1465 aa10.47□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Zbtb4Q5F293 982 aa10.47□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Ltbp4Q8K4G1 1666 aa10.46□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Aebp2Q9Z248 504 aaKnown RBP10.46□□□□□ -0.73
Ube4a-204ENSMUST00000138559 Cep170bQ80U49 1574 aa10.46□□□□□ -0.74
Ube4a-204ENSMUST00000138559 Sin3aQ60520 1274 aaKnown RBP10.45□□□□□ -0.74
Ube4a-204ENSMUST00000138559 Thsd7aQ69ZU6 1645 aa10.45□□□□□ -0.74
Ube4a-204ENSMUST00000138559 Rapgef3Q8VCC8 918 aa10.45□□□□□ -0.74
Ube4a-204ENSMUST00000138559 Gm16486A0A1D5RMD1 1434 aa10.43□□□□□ -0.74
Ube4a-204ENSMUST00000138559 HnrnpmQ9D0E1 729 aaKnown RBP10.43□□□□□ -0.74
Ube4a-204ENSMUST00000138559 Tubgcp6G5E8P0 1769 aa10.43□□□□□ -0.74
Ube4a-204ENSMUST00000138559 CenpjQ569L8 1344 aa10.43□□□□□ -0.74
Ube4a-204ENSMUST00000138559 Abca14E9Q8F8 1683 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms