RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Ppp4r2Q0VGB7 417 aa32.24■■■□□ 2.75
Ubp1-203ENSMUST00000116492 ErbinQ80TH2 1402 aa32.24■■■□□ 2.75
Ubp1-203ENSMUST00000116492 Cep152A2AUM9 1736 aaKnown RBP32.24■■■□□ 2.75
Ubp1-203ENSMUST00000116492 Kdm2aP59997 1161 aa32.23■■■□□ 2.75
Ubp1-203ENSMUST00000116492 Topbp1Q6ZQF0 1515 aa32.22■■■□□ 2.75
Ubp1-203ENSMUST00000116492 Tex14Q7M6U3 1450 aa32.2■■■□□ 2.75
Ubp1-203ENSMUST00000116492 Q7TT23 1179 aa32.2■■■□□ 2.75
Ubp1-203ENSMUST00000116492 Kank1E9Q238 1360 aa32.19■■■□□ 2.74
Ubp1-203ENSMUST00000116492 Abca8aQ8K442 1620 aa32.18■■■□□ 2.74
Ubp1-203ENSMUST00000116492 Gm16486A0A1D5RMD1 1434 aa32.18■■■□□ 2.74
Ubp1-203ENSMUST00000116492 OvosQ3UU35 1456 aa32.18■■■□□ 2.74
Ubp1-203ENSMUST00000116492 Stard8Q8K031 1019 aa32.17■■■□□ 2.74
Ubp1-203ENSMUST00000116492 Itsn2Q9Z0R6 1659 aa32.17■■■□□ 2.74
Ubp1-203ENSMUST00000116492 Gm20521D3Z5F7 333 aa32.15■■■□□ 2.74
Ubp1-203ENSMUST00000116492 Prex1Q69ZK0 1650 aa32.13■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Upf2A2AT37 1269 aaKnown RBP32.13■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Slc4a1apE9PX68 744 aa32.13■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Depdc5P61460 1591 aa32.13■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Fam184bQ0KK56 942 aa32.12■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Rims1Q99NE5 1463 aa32.12■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Atp10aO54827 1508 aa32.12■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Zfp444Q3TDV8 331 aaKnown RBP32.11■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Os9Q8K2C7 672 aa32.09■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Stk24Q99KH8 431 aa32.09■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Supt16hQ920B9 1047 aa32.08■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Adgrb3Q80ZF8 1522 aa32.07■■■□□ 2.73
Ubp1-203ENSMUST00000116492 Trpm1Q2TV84 1622 aa32.07■■■□□ 2.72
Ubp1-203ENSMUST00000116492 AatkQ80YE4 1365 aa32.07■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Gtf2e1Q9D0D5 440 aa32.06■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Srpk2O54781 681 aaKnown RBP32.06■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Myo3aQ8K3H5 1613 aa32.05■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Nphp4P59240 1425 aa32.04■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Ehbp1l1Q99MS7 1716 aa32.03■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Rab3gap2Q8BMG7 1366 aa32.03■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Gli2Q0VGT2 1544 aa32.03■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Erbb3Q61526 1339 aa32.03■■■□□ 2.72
Ubp1-203ENSMUST00000116492 AglF8VPN4 1532 aa32.02■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Ppp2r1aQ76MZ3 589 aa32.02■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Myom2Q14BI5 1463 aa32.02■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Efcab6Q6P1E8 1516 aa32.01■■■□□ 2.72
Ubp1-203ENSMUST00000116492 Pabpn1Q8CCS6 302 aaKnown RBP32.01■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Usp40Q8BWR4 1235 aa32■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Cdc42bpgQ80UW5 1551 aa32■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Cdk5rap2Q8K389 1822 aa32■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Atf7ipQ7TT18 1306 aa31.99■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Tecpr2Q3UH45 1423 aa31.99■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Akap12Q9WTQ5 1684 aa31.99■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Mink1Q9JM52 1308 aa31.98■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Fan1Q69ZT1 1020 aa31.97■■■□□ 2.71
Ubp1-203ENSMUST00000116492 DnmbpQ6TXD4 1580 aa31.96■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Col17a1Q07563 1470 aa31.96■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Kdm5aQ3UXZ9 1690 aa31.96■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Rtl5Q5DTT4 599 aa31.95■■■□□ 2.71
Ubp1-203ENSMUST00000116492 Clasp1Q80TV8 1535 aaKnown RBP31.93■■■□□ 2.7
Ubp1-203ENSMUST00000116492 Ptch1Q61115 1434 aa31.93■■■□□ 2.7
Ubp1-203ENSMUST00000116492 Uggt1Q6P5E4 1551 aa31.92■■■□□ 2.7
Ubp1-203ENSMUST00000116492 Prdm2A2A7B5 1709 aaKnown RBP31.9■■■□□ 2.7
Ubp1-203ENSMUST00000116492 Esx1O88933 382 aa31.89■■■□□ 2.7
Ubp1-203ENSMUST00000116492 Ino80Q6ZPV2 1559 aa31.89■■■□□ 2.7
Ubp1-203ENSMUST00000116492 Sipa1l1Q8C0T5 1782 aa31.88■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Rad21Q61550 635 aaKnown RBP31.88■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Ttc41Q692V3 1318 aa31.87■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Talpid3E9PV87 1520 aa31.85■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Puf60Q3UEB3 564 aaKnown RBP31.85■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Liat1Q810M6 228 aa31.85■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Kif7B7ZNG0 1348 aa31.84■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Dip2cE9PWR4 1557 aa31.83■■■□□ 2.69
Ubp1-203ENSMUST00000116492 RereQ80TZ9 1558 aa31.83■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Kiaa0556Q8C753 1610 aa31.83■■■□□ 2.69
Ubp1-203ENSMUST00000116492 Ak9G3UYQ4 1894 aa31.82■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Kif16bB1AVY7 1312 aa31.81■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Gprasp1Q5U4C1 1347 aa31.81■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Tcerg1Q8CGF7 1100 aaKnown RBP31.81■■■□□ 2.68
Ubp1-203ENSMUST00000116492 AdgbG3UZ78 1657 aa31.8■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Kcnh8P59111 1102 aa31.8■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Gm156Q58A37 223 aa31.8■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Plxnc1Q9QZC2 1574 aa31.8■■■□□ 2.68
Ubp1-203ENSMUST00000116492 NeflP08551 543 aa31.78■■■□□ 2.68
Ubp1-203ENSMUST00000116492 Dcaf11Q91VU6 549 aa31.76■■■□□ 2.68
Ubp1-203ENSMUST00000116492 TnikP83510 1323 aa31.76■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Prkrip1Q9CWV6 186 aaKnown RBP31.76■■■□□ 2.67
Ubp1-203ENSMUST00000116492 CrbnQ8C7D2 445 aa31.73■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Myom1Q62234 1667 aaKnown RBP31.73■■■□□ 2.67
Ubp1-203ENSMUST00000116492 AU022751B1B0V2 589 aa31.73■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Adamts7Q68SA9 1657 aa31.72■■■□□ 2.67
Ubp1-203ENSMUST00000116492 PalldQ9ET54 1408 aa31.72■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Skint5A7XUY5 1461 aa31.72■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Mroh1E0CZ22 1640 aa31.71■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Slc4a3P16283 1227 aa31.71■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Nlrp6Q91WS2 869 aa31.71■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Slc52a2Q9D8F3 450 aa31.71■■■□□ 2.67
Ubp1-203ENSMUST00000116492 Mbd3Q9Z2D8 285 aaKnown RBP31.69■■■□□ 2.66
Ubp1-203ENSMUST00000116492 MaddQ80U28 1577 aa31.69■■■□□ 2.66
Ubp1-203ENSMUST00000116492 Knl1Q66JQ7 1612 aa31.69■■■□□ 2.66
Ubp1-203ENSMUST00000116492 KdrP35918 1367 aa31.67■■■□□ 2.66
Ubp1-203ENSMUST00000116492 Lrrc7Q80TE7 1490 aa31.67■■■□□ 2.66
Ubp1-203ENSMUST00000116492 InsrP15208 1372 aa31.67■■■□□ 2.66
Ubp1-203ENSMUST00000116492 Stag3O70576 1240 aa31.66■■■□□ 2.66
Ubp1-203ENSMUST00000116492 Ift172Q6VH22 1749 aa31.66■■■□□ 2.66
Ubp1-203ENSMUST00000116492 Plekhh1Q80TI1 1356 aa31.65■■■□□ 2.66
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms