RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Speer4f1Q9D5Q6 258 aa28,54■■■□□ 2,16
Trim3-202ENSMUST00000106789 Gm16486A0A1D5RMD1 1434 aa28,54■■■□□ 2,16
Trim3-202ENSMUST00000106789 Edc4Q3UJB9 1406 aaKnown RBP28,54■■■□□ 2,16
Trim3-202ENSMUST00000106789 Sart3Q9JLI8 962 aaKnown RBP28,54■■■□□ 2,16
Trim3-202ENSMUST00000106789 Neurod2Q62414 383 aa28,53■■■□□ 2,16
Trim3-202ENSMUST00000106789 Os9Q8K2C7 672 aa28,52■■■□□ 2,16
Trim3-202ENSMUST00000106789 Gtf3c3Q3TMP1 882 aa28,51■■■□□ 2,15
Trim3-202ENSMUST00000106789 Irx3P81067 507 aa28,51■■■□□ 2,15
Trim3-202ENSMUST00000106789 Map3k5O35099 1380 aa28,5■■■□□ 2,15
Trim3-202ENSMUST00000106789 NudcO35685 332 aaKnown RBP28,5■■■□□ 2,15
Trim3-202ENSMUST00000106789 Rusc2Q80U22 1514 aa28,49■■■□□ 2,15
Trim3-202ENSMUST00000106789 Tulp4Q9JIL5 1547 aa28,49■■■□□ 2,15
Trim3-202ENSMUST00000106789 Nlrp6Q91WS2 869 aa28,49■■■□□ 2,15
Trim3-202ENSMUST00000106789 Dnai1Q8C0M8 701 aa28,47■■■□□ 2,15
Trim3-202ENSMUST00000106789 Rnf17Q99MV7 1640 aa28,46■■■□□ 2,15
Trim3-202ENSMUST00000106789 AI481877A2ALV5 1481 aa28,46■■■□□ 2,15
Trim3-202ENSMUST00000106789 Sall3Q62255 1320 aa28,46■■■□□ 2,15
Trim3-202ENSMUST00000106789 Clasp1Q80TV8 1535 aaKnown RBP28,45■■■□□ 2,15
Trim3-202ENSMUST00000106789 Cep170Q6A065 1588 aa28,45■■■□□ 2,15
Trim3-202ENSMUST00000106789 Atf7ipQ7TT18 1306 aa28,45■■■□□ 2,14
Trim3-202ENSMUST00000106789 Prdm16A2A935 1275 aa28,44■■■□□ 2,14
Trim3-202ENSMUST00000106789 Ccdc30Q8BVF4 654 aa28,44■■■□□ 2,14
Trim3-202ENSMUST00000106789 Kif7B7ZNG0 1348 aa28,43■■■□□ 2,14
Trim3-202ENSMUST00000106789 Cfap74Q3UY96 1578 aa28,43■■■□□ 2,14
Trim3-202ENSMUST00000106789 Neurl4Q5NCX5 1563 aa28,42■■■□□ 2,14
Trim3-202ENSMUST00000106789 Smc5Q8CG46 1101 aaKnown RBP28,41■■■□□ 2,14
Trim3-202ENSMUST00000106789 Prdm10Q3UTQ7 1184 aa28,41■■■□□ 2,14
Trim3-202ENSMUST00000106789 Dcaf11Q91VU6 549 aa28,41■■■□□ 2,14
Trim3-202ENSMUST00000106789 Robo2Q7TPD3 1470 aa28,4■■■□□ 2,14
Trim3-202ENSMUST00000106789 Gm20521D3Z5F7 333 aa28,39■■■□□ 2,14
Trim3-202ENSMUST00000106789 Nsd2Q8BVE8 1365 aa28,39■■■□□ 2,13
Trim3-202ENSMUST00000106789 Cdc42bpbQ7TT50 1713 aa28,37■■■□□ 2,13
Trim3-202ENSMUST00000106789 Ppm1gQ61074 542 aa28,37■■■□□ 2,13
Trim3-202ENSMUST00000106789 Pdcd11Q6NS46 1862 aaKnown RBP28,36■■■□□ 2,13
Trim3-202ENSMUST00000106789 Trim30dE9PWL0 497 aa28,36■■■□□ 2,13
Trim3-202ENSMUST00000106789 Usp19Q3UJD6 1360 aa28,35■■■□□ 2,13
Trim3-202ENSMUST00000106789 Fgd6Q69ZL1 1399 aa28,35■■■□□ 2,13
Trim3-202ENSMUST00000106789 Tspyl2Q7TQI8 677 aa28,35■■■□□ 2,13
Trim3-202ENSMUST00000106789 Abcc6Q9R1S7 1498 aa28,35■■■□□ 2,13
Trim3-202ENSMUST00000106789 Mre11Q61216 706 aa28,34■■■□□ 2,13
Trim3-202ENSMUST00000106789 Gm14025A2AP89 1413 aa28,33■■■□□ 2,13
Trim3-202ENSMUST00000106789 Golga2Q921M4 999 aa28,33■■■□□ 2,13
Trim3-202ENSMUST00000106789 Mapk8ip3Q9ESN9 1337 aa28,33■■■□□ 2,13
Trim3-202ENSMUST00000106789 4930567H17RikQ3V0K5 233 aa28,33■■■□□ 2,12
Trim3-202ENSMUST00000106789 Pola1P33609 1465 aa28,32■■■□□ 2,12
Trim3-202ENSMUST00000106789 Hecw1Q8K4P8 1604 aa28,32■■■□□ 2,12
Trim3-202ENSMUST00000106789 Gtf2e1Q9D0D5 440 aa28,32■■■□□ 2,12
Trim3-202ENSMUST00000106789 Usp54Q8BL06 1588 aaKnown RBP28,3■■■□□ 2,12
Trim3-202ENSMUST00000106789 Abcc3B2RX12 1523 aa28,3■■■□□ 2,12
Trim3-202ENSMUST00000106789 Col17a1Q07563 1470 aa28,3■■■□□ 2,12
Trim3-202ENSMUST00000106789 Eif2s2Q99L45 331 aaKnown RBP28,3■■■□□ 2,12
Trim3-202ENSMUST00000106789 Ak7Q9D2H2 614 aa28,28■■■□□ 2,12
Trim3-202ENSMUST00000106789 Gas2l2Q5SSG4 860 aa28,27■■■□□ 2,12
Trim3-202ENSMUST00000106789 Stk24Q99KH8 431 aa28,27■■■□□ 2,12
Trim3-202ENSMUST00000106789 Kif1bQ60575 1816 aaKnown RBP28,27■■■□□ 2,12
Trim3-202ENSMUST00000106789 Zmym3Q9JLM4 1370 aa28,27■■■□□ 2,12
Trim3-202ENSMUST00000106789 Fan1Q69ZT1 1020 aa28,26■■■□□ 2,11
Trim3-202ENSMUST00000106789 Usp40Q8BWR4 1235 aa28,26■■■□□ 2,11
Trim3-202ENSMUST00000106789 ShprhQ7TPQ3 1674 aa28,26■■■□□ 2,11
Trim3-202ENSMUST00000106789 Pank1Q8K4K6 548 aa28,25■■■□□ 2,11
Trim3-202ENSMUST00000106789 Hsp90ab1P11499 724 aaKnown RBP28,25■■■□□ 2,11
Trim3-202ENSMUST00000106789 Ipo8Q7TMY7 1010 aa28,25■■■□□ 2,11
Trim3-202ENSMUST00000106789 Srpk2O54781 681 aaKnown RBP28,24■■■□□ 2,11
Trim3-202ENSMUST00000106789 Plcd4Q8K3R3 807 aa28,24■■■□□ 2,11
Trim3-202ENSMUST00000106789 Cnga1P29974 684 aa28,23■■■□□ 2,11
Trim3-202ENSMUST00000106789 Kif3bQ61771 747 aa28,22■■■□□ 2,11
Trim3-202ENSMUST00000106789 AnkarA2RT91 1465 aa28,22■■■□□ 2,11
Trim3-202ENSMUST00000106789 ArxO35085 564 aa28,19■■■□□ 2,1
Trim3-202ENSMUST00000106789 Ralbp1Q62172 648 aa28,19■■■□□ 2,1
Trim3-202ENSMUST00000106789 Kiaa1107Q80TK0 1369 aa28,19■■■□□ 2,1
Trim3-202ENSMUST00000106789 Itsn2Q9Z0R6 1659 aa28,19■■■□□ 2,1
Trim3-202ENSMUST00000106789 Atp10dQ8K2X1 1416 aa28,19■■■□□ 2,1
Trim3-202ENSMUST00000106789 Uspl1Q3ULM6 1089 aa28,19■■■□□ 2,1
Trim3-202ENSMUST00000106789 Ylpm1Q9R0I7 1386 aaKnown RBP28,18■■■□□ 2,1
Trim3-202ENSMUST00000106789 Ccdc183A2AJB1 534 aa28,17■■■□□ 2,1
Trim3-202ENSMUST00000106789 Kdm5aQ3UXZ9 1690 aa28,17■■■□□ 2,1
Trim3-202ENSMUST00000106789 Uggt2E9Q4X2 1504 aa28,17■■■□□ 2,1
Trim3-202ENSMUST00000106789 NhsB1AV60 1647 aa28,16■■■□□ 2,1
Trim3-202ENSMUST00000106789 Polr3glQ8R0C0 218 aa28,15■■■□□ 2,1
Trim3-202ENSMUST00000106789 Armcx1Q9CX83 456 aa28,15■■■□□ 2,1
Trim3-202ENSMUST00000106789 Abcc1O35379 1528 aa28,14■■■□□ 2,1
Trim3-202ENSMUST00000106789 ErbinQ80TH2 1402 aa28,13■■■□□ 2,09
Trim3-202ENSMUST00000106789 Amer1Q7TS75 1132 aa28,13■■■□□ 2,09
Trim3-202ENSMUST00000106789 Atxn3Q9CVD2 355 aa28,13■■■□□ 2,09
Trim3-202ENSMUST00000106789 Stard8Q8K031 1019 aa28,11■■■□□ 2,09
Trim3-202ENSMUST00000106789 Ttc21bQ0HA38 1315 aa28,1■■■□□ 2,09
Trim3-202ENSMUST00000106789 Rlbp1Q9Z275 317 aa28,1■■■□□ 2,09
Trim3-202ENSMUST00000106789 Trim58Q5NCC9 485 aa28,09■■■□□ 2,09
Trim3-202ENSMUST00000106789 Kiaa1210E9Q0C6 1637 aa28,08■■■□□ 2,09
Trim3-202ENSMUST00000106789 Ppp1r9bQ6R891 817 aaKnown RBP28,08■■■□□ 2,09
Trim3-202ENSMUST00000106789 Kidins220E9Q9B7 1793 aa28,08■■■□□ 2,08
Trim3-202ENSMUST00000106789 Abca8bQ8K440 1620 aa28,07■■■□□ 2,08
Trim3-202ENSMUST00000106789 Abca17E9PX95 1733 aa28,07■■■□□ 2,08
Trim3-202ENSMUST00000106789 Duxf3A0A0N4SV92 674 aa28,07■■■□□ 2,08
Trim3-202ENSMUST00000106789 Trim26Q99PN3 545 aa28,07■■■□□ 2,08
Trim3-202ENSMUST00000106789 Xrn1P97789 1719 aaKnown RBP28,06■■■□□ 2,08
Trim3-202ENSMUST00000106789 Myo3aQ8K3H5 1613 aa28,05■■■□□ 2,08
Trim3-202ENSMUST00000106789 Znf608Q56A10 1511 aa28,04■■■□□ 2,08
Trim3-202ENSMUST00000106789 Znf521Q6KAS7 1311 aa28,04■■■□□ 2,08
Trim3-202ENSMUST00000106789 Gm6268A2A3U9 297 aa28,04■■■□□ 2,08
Retrieved 100 of 22,080 RNA–protein pairs in 20,2 ms