RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Usp16Q99LG0 825 aa18.61■□□□□ 0.57
Ccdc50-203ENSMUST00000100026 UvssaQ9D479 717 aa18.61■□□□□ 0.57
Ccdc50-203ENSMUST00000100026 MsnP26041 577 aaKnown RBP18.59■□□□□ 0.57
Ccdc50-203ENSMUST00000100026 Srek1Q8BZX4 494 aaKnown RBP18.59■□□□□ 0.57
Ccdc50-203ENSMUST00000100026 Smarca4Q3TKT4 1613 aaKnown RBP18.59■□□□□ 0.57
Ccdc50-203ENSMUST00000100026 Synj1Q8CHC4 1574 aa18.58■□□□□ 0.57
Ccdc50-203ENSMUST00000100026 Gnl3lQ6PGG6 577 aaKnown RBP18.58■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Nap1l3Q794H2 544 aa18.58■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Gpatch11Q3UFS4 262 aa18.58■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Sf3a1Q8K4Z5 791 aaKnown RBP18.58■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 1700123L14RikQ3V2K7 440 aa18.57■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Ylpm1Q9R0I7 1386 aaKnown RBP18.57■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Ncbp3Q8BZR9 615 aaKnown RBP18.57■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Cfdp1O88271 295 aaKnown RBP18.57■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Cplx1P63040 134 aa18.56■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Filip1lQ6P6L0 1131 aa18.56■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Atp2b2Q9R0K7 1198 aa18.56■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Gabpb2P81069 414 aa18.55■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Tpm1P58771 284 aa18.55■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 St18Q80TY4 1045 aa18.55■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Ric3Q8BPM6 367 aa18.55■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Gm21698A0A087WQP8 267 aa18.54■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Gm21671G3UY31 267 aa18.54■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Dmrt2Q8BG36 561 aa18.54■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Rock1P70335 1354 aa18.54■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 March6Q6ZQ89 909 aa18.54■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 PnisrA2AJT4 805 aaKnown RBP18.53■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 MycnP03966 462 aaKnown RBP18.53■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Abl1P00520 1123 aa18.53■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 FosbP13346 338 aa18.53■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 PhaxQ9JJT9 385 aaKnown RBP18.53■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Mphosph10Q810V0 681 aaKnown RBP18.52■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Nsd2Q8BVE8 1365 aa18.52■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Arid4aF8VPQ2 1261 aaKnown RBP18.52■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Kiaa0754Q69ZZ9 979 aa18.52■□□□□ 0.56
Ccdc50-203ENSMUST00000100026 Rnf20Q5DTM8 973 aa18.52■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Cnnm1Q0GA42 951 aa18.51■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 ArsiQ32KI9 573 aa18.51■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Puf60Q3UEB3 564 aaKnown RBP18.51■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 TefQ9JLC6 301 aa18.51■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Wdr78E9PYY5 807 aa18.51■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 FanciQ8K368 1330 aa18.5■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Rec8Q8C5S7 591 aa18.5■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Arhgap5P97393 1501 aa18.5■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Zscan10Q3URR7 782 aa18.5■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Sh3bgrQ9WUZ7 214 aa18.49■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Gnai1B2RSH2 354 aa18.49■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Gnai3Q9DC51 354 aa18.49■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 A0A1L1SQF0 893 aa18.49■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Cspp1B2RX88 1205 aa18.49■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Sv2bQ8BG39 683 aa18.49■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Urb2E9Q7L1 1524 aaKnown RBP18.48■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Pde4cQ3UEI1 686 aa18.48■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 SetQ9EQU5 289 aaKnown RBP18.48■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Ppp4r3bQ922R5 820 aa18.48■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Fmnl2A2APV2 1086 aa18.48■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Hmox1P14901 289 aa18.47■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 KinQ8K339 391 aa18.47■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Erc2Q6PH08 957 aa18.47■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Dapk1Q80YE7 1442 aa18.47■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 SlkO54988 1233 aa18.47■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Ipo9Q91YE6 1041 aa18.47■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Nectin2P32507 530 aa18.46■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Me1P06801 572 aa18.46■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Swt1Q9DBQ9 907 aa18.46■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Esx1O88933 382 aa18.46■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Ipo7Q9EPL8 1038 aaKnown RBP18.46■□□□□ 0.55
Ccdc50-203ENSMUST00000100026 Hdgfl1Q2VPR5 283 aa18.46■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Afap1Q80YS6 731 aa18.45■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Fam193aQ8CGI1 1231 aaKnown RBP18.45■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Rsph3aQ3UFY4 516 aa18.45■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Ralbp1Q62172 648 aa18.45■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Speer4bQ9D9F7 267 aa18.45■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Polr3gQ6NXY9 223 aa18.44■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Phactr2B1AVP0 632 aa18.44■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Chmp4cQ9D7F7 232 aa18.44■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Ftsj3Q9DBE9 838 aaKnown RBP18.44■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Tnnt2P50752 301 aa18.43■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Map3k5O35099 1380 aa18.43■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Drc7Q6V3W6 876 aa18.43■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 IkQ9Z1M8 557 aaKnown RBP18.43■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 HypkQ9CR41 129 aa18.43■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Fnbp4Q6ZQ03 1031 aa18.43■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Plekhd1B2RPU2 505 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Rbm25B2RY56 838 aaKnown RBP18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gtf2f1Q3THK3 508 aaKnown RBP18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Bicd2Q921C5 820 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 MpripP97434 1024 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Ell2Q3UKU1 639 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Dennd6aQ8BH65 605 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Cttnbp2B9EJA2 1648 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Trim30aP15533 496 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Mapk8ip1Q9WVI9 707 aa18.42■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Casq1O09165 405 aa18.41■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Ccdc96Q9CR92 584 aa18.41■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Becn1O88597 448 aa18.41■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Prdm16A2A935 1275 aa18.41■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Trim29Q8R2Q0 587 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Nutm1Q8BHP2 1126 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Hook1Q8BIL5 728 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms