RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 GsdmaQ9EST1 446 aa12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Rabep1O35551 862 aa12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Trim58Q5NCC9 485 aa12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Utp3Q9JI13 469 aaKnown RBP12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Slc4a10Q5DTL9 1118 aa12.83□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Stk31Q99MW1 1018 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Sh3bgrQ9WUZ7 214 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gcom1E9PZ54 550 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 MyzapQ3UIJ9 466 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gripap1Q8VD04 806 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gprasp1Q5U4C1 1347 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ak7Q9D2H2 614 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Hook1Q8BIL5 728 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Rab11fip3Q8CHD8 1047 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ap3b2Q9JME5 1082 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 WrnO09053 1401 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Fam184bQ0KK56 942 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Atad2bE9Q166 1460 aaKnown RBP12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Plekhh1Q80TI1 1356 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Rfx1P48377 963 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ccdc43Q9CR29 222 aaKnown RBP12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Znf771Q8BJ90 317 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 KinQ8K339 391 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 G3bp1P97855 465 aaKnown RBP12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Sycp1Q62209 993 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Kif4P33174 1231 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Pak3Q61036 559 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Phldb1Q6PDH0 1371 aaKnown RBP12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Eif2s2Q99L45 331 aaKnown RBP12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ubap1lG3UW59 384 aa12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Atl3Q91YH5 541 aa12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Prkrip1Q9CWV6 186 aaKnown RBP12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Sart1Q9Z315 806 aaKnown RBP12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Arid4aF8VPQ2 1261 aaKnown RBP12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gabpb2P81069 414 aa12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Dhx8A2A4P0 1244 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Pdcl3Q8BVF2 240 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Zscan10Q3URR7 782 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Utp14aQ640M1 767 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Cc2d2bA0A286YDU8 1405 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Srek1Q8BZX4 494 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 LrpprcQ6PB66 1392 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Kif7B7ZNG0 1348 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Shroom4Q1W617 1475 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 HmmrQ00547 794 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Evc2Q8K1G2 1220 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Esx1O88933 382 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Tceal9Q9DD24 104 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Smc4Q8CG47 1286 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Hmgn5Q9JL35 406 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Def6Q8C2K1 630 aa12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Usp40Q8BWR4 1235 aa12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Rnf20Q5DTM8 973 aa12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 NaspQ99MD9 773 aaKnown RBP12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Pnmal2G3X9N3 661 aa12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Mrvi1Q9WUX5 899 aaKnown RBP12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Tiam1Q60610 1591 aa12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ccdc30Q8BVF4 654 aa12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Cplx2P84086 134 aa12.74□□□□□ -0.37
Col6a3-202ENSMUST00000097653 AppP12023 770 aa12.74□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Dhx16G3X8X0 1044 aaKnown RBP12.74□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ccdc173A0JLY1 547 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Necab1Q8BG18 352 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Cabp4Q8VHC5 271 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 PhaxQ9JJT9 385 aaKnown RBP12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 ErbinQ80TH2 1402 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 EzrP26040 586 aaKnown RBP12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Znf710Q3U288 666 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Dhx29Q6PGC1 1365 aaKnown RBP12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Trim55G3X8Y1 545 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ncapd3Q6ZQK0 1506 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Cetn4Q8K4K1 168 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ncbp3Q8BZR9 615 aaKnown RBP12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Chmp4cQ9D7F7 232 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Arhgef5E9Q7D5 1581 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 KarsQ99MN1 595 aaKnown RBP12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Top2bQ64511 1612 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Bicd2Q921C5 820 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Mns1Q61884 491 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Kif3aP28741 701 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Arhgap5P97393 1501 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ccdc183A2AJB1 534 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Phactr2B1AVP0 632 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Gpatch3Q8BIY1 525 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Fam193aQ8CGI1 1231 aaKnown RBP12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 BbxQ8VBW5 907 aa12.71□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Cplx1P63040 134 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Rpgrip1lQ8CG73 1264 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Nsd2Q8BVE8 1365 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Chrna2Q91X60 512 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Smc3Q9CW03 1217 aaKnown RBP12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Drc7Q6V3W6 876 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Cc2d1aQ8K1A6 943 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 UvssaQ9D479 717 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Rrp9Q91WM3 475 aaKnown RBP12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Dixdc1Q80Y83 711 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Ift140E9PY46 1464 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Ttll13A4Q9F6 804 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Erc2Q6PH08 957 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Cchcr1Q8K2I2 770 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms