RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Cetn4Q8K4K1 168 aa12.49□□□□□ -0.41
Lig4-201ENSMUST00000095476 Synj1Q8CHC4 1574 aa12.49□□□□□ -0.41
Lig4-201ENSMUST00000095476 Nup155Q99P88 1391 aaKnown RBP12.49□□□□□ -0.41
Lig4-201ENSMUST00000095476 Dusp9Q7TNL7 452 aa12.49□□□□□ -0.41
Lig4-201ENSMUST00000095476 Vgll3P85442 326 aa12.48□□□□□ -0.41
Lig4-201ENSMUST00000095476 Plekhh2Q8C115 1491 aa12.48□□□□□ -0.41
Lig4-201ENSMUST00000095476 Ccnb3Q810T2 1396 aa12.48□□□□□ -0.41
Lig4-201ENSMUST00000095476 Ccer1Q9CQL2 403 aa12.48□□□□□ -0.41
Lig4-201ENSMUST00000095476 G3bp1P97855 465 aaKnown RBP12.47□□□□□ -0.41
Lig4-201ENSMUST00000095476 Vps8Q0P5W1 1427 aa12.47□□□□□ -0.41
Lig4-201ENSMUST00000095476 Polr3gQ6NXY9 223 aa12.47□□□□□ -0.41
Lig4-201ENSMUST00000095476 PogkQ80TC5 607 aa12.47□□□□□ -0.41
Lig4-201ENSMUST00000095476 Zkscan1Q8BGS3 561 aaKnown RBP12.47□□□□□ -0.41
Lig4-201ENSMUST00000095476 Mrc2Q64449 1479 aa12.47□□□□□ -0.41
Lig4-201ENSMUST00000095476 Cbx1P83917 185 aaKnown RBP12.46□□□□□ -0.41
Lig4-201ENSMUST00000095476 Fam184bQ0KK56 942 aa12.46□□□□□ -0.41
Lig4-201ENSMUST00000095476 Pdcl2Q78Y63 240 aa12.46□□□□□ -0.41
Lig4-201ENSMUST00000095476 NaspQ99MD9 773 aaKnown RBP12.45□□□□□ -0.42
Lig4-201ENSMUST00000095476 Mns1Q61884 491 aa12.45□□□□□ -0.42
Lig4-201ENSMUST00000095476 Tsen2Q6P7W5 460 aa12.45□□□□□ -0.42
Lig4-201ENSMUST00000095476 Olfml1Q8BSH2 233 aa12.45□□□□□ -0.42
Lig4-201ENSMUST00000095476 Ppp1r9bQ6R891 817 aaKnown RBP12.45□□□□□ -0.42
Lig4-201ENSMUST00000095476 Drc7Q6V3W6 876 aa12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Tex2Q6ZPJ0 1128 aaKnown RBP12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 GsdmaQ9EST1 446 aa12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Nek4Q9Z1J2 792 aa12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Rtf1A2AQ19 715 aaKnown RBP12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Pabpn1Q8CCS6 302 aaKnown RBP12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Nop14Q8R3N1 860 aaKnown RBP12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Kif7B7ZNG0 1348 aa12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Phactr2B1AVP0 632 aa12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Q7TT23 1179 aa12.44□□□□□ -0.42
Lig4-201ENSMUST00000095476 Znhit6Q3UFB2 460 aaKnown RBP12.43□□□□□ -0.42
Lig4-201ENSMUST00000095476 SkilQ60665 675 aa12.43□□□□□ -0.42
Lig4-201ENSMUST00000095476 Plekhg5Q66T02 1073 aa12.43□□□□□ -0.42
Lig4-201ENSMUST00000095476 Efcab5A0JP43 1406 aa12.43□□□□□ -0.42
Lig4-201ENSMUST00000095476 Brpf1B2RRD7 1212 aa12.43□□□□□ -0.42
Lig4-201ENSMUST00000095476 Bicd2Q921C5 820 aa12.42□□□□□ -0.42
Lig4-201ENSMUST00000095476 Zrsr2Q62377 462 aaKnown RBP12.42□□□□□ -0.42
Lig4-201ENSMUST00000095476 Smc3Q9CW03 1217 aaKnown RBP12.42□□□□□ -0.42
Lig4-201ENSMUST00000095476 Gprasp1Q5U4C1 1347 aa12.41□□□□□ -0.42
Lig4-201ENSMUST00000095476 PdcQ9QW08 244 aa12.41□□□□□ -0.42
Lig4-201ENSMUST00000095476 Def6Q8C2K1 630 aa12.41□□□□□ -0.42
Lig4-201ENSMUST00000095476 Trim55G3X8Y1 545 aa12.4□□□□□ -0.42
Lig4-201ENSMUST00000095476 Carmil1Q6EDY6 1374 aa12.4□□□□□ -0.42
Lig4-201ENSMUST00000095476 Ftsj3Q9DBE9 838 aaKnown RBP12.4□□□□□ -0.42
Lig4-201ENSMUST00000095476 Smc5Q8CG46 1101 aaKnown RBP12.4□□□□□ -0.42
Lig4-201ENSMUST00000095476 Q3TQI7 289 aaKnown RBP12.4□□□□□ -0.42
Lig4-201ENSMUST00000095476 CastP51125 788 aa12.39□□□□□ -0.43
Lig4-201ENSMUST00000095476 Q9D2X8 372 aa12.39□□□□□ -0.43
Lig4-201ENSMUST00000095476 Fam184aE9PW83 1143 aa12.39□□□□□ -0.43
Lig4-201ENSMUST00000095476 Egfem1Q8C088 590 aa12.39□□□□□ -0.43
Lig4-201ENSMUST00000095476 Cttnbp2B9EJA2 1648 aa12.38□□□□□ -0.43
Lig4-201ENSMUST00000095476 Plin1Q8CGN5 517 aa12.38□□□□□ -0.43
Lig4-201ENSMUST00000095476 Ecm2Q5FW85 670 aa12.38□□□□□ -0.43
Lig4-201ENSMUST00000095476 Dhx29Q6PGC1 1365 aaKnown RBP12.38□□□□□ -0.43
Lig4-201ENSMUST00000095476 Tpm1P58771 284 aa12.37□□□□□ -0.43
Lig4-201ENSMUST00000095476 Wdr62Q3U3T8 1523 aa12.37□□□□□ -0.43
Lig4-201ENSMUST00000095476 Ubxn4Q8VCH8 506 aa12.37□□□□□ -0.43
Lig4-201ENSMUST00000095476 Senp3Q9EP97 568 aaKnown RBP12.37□□□□□ -0.43
Lig4-201ENSMUST00000095476 AknaQ80VW7 1404 aa12.37□□□□□ -0.43
Lig4-201ENSMUST00000095476 Mcm2P97310 904 aa12.36□□□□□ -0.43
Lig4-201ENSMUST00000095476 Nol12Q8BG17 217 aa12.36□□□□□ -0.43
Lig4-201ENSMUST00000095476 ImpactO55091 318 aa12.36□□□□□ -0.43
Lig4-201ENSMUST00000095476 Ppp1r18Q8BQ30 594 aa12.36□□□□□ -0.43
Lig4-201ENSMUST00000095476 Mad1l1Q9WTX8 717 aaKnown RBP12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Triml2E9PW10 424 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Zhx1P70121 873 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Fez2Q6TYB5 348 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Ciz1Q8VEH2 845 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Spag9Q58A65 1321 aaKnown RBP12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Ubap1lG3UW59 384 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Gabpb2P81069 414 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Srek1Q8BZX4 494 aaKnown RBP12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Chmp4cQ9D7F7 232 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Rcan3Q9JKK0 239 aa12.35□□□□□ -0.43
Lig4-201ENSMUST00000095476 Birc3O08863 600 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 Otud6bQ8K2H2 294 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 Kif18aQ91WD7 886 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 Syce3B5KM66 88 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 Stk11ipQ3TAA7 1072 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 Cog6Q8R3I3 657 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 Tmc1Q8R4P5 757 aa12.34□□□□□ -0.43
Lig4-201ENSMUST00000095476 AnlnQ8K298 1121 aaKnown RBP12.33□□□□□ -0.43
Lig4-201ENSMUST00000095476 Fmnl2A2APV2 1086 aa12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ppp2r1aQ76MZ3 589 aa12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ints3Q7TPD0 1041 aaKnown RBP12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Gps2Q921N8 327 aa12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Arglu1Q3UL36 271 aaKnown RBP12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Hook1Q8BIL5 728 aa12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Mical1Q8VDP3 1048 aa12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 LrpprcQ6PB66 1392 aaKnown RBP12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Tmco3Q8BH01 678 aa12.33□□□□□ -0.44
Lig4-201ENSMUST00000095476 Kank1E9Q238 1360 aa12.32□□□□□ -0.44
Lig4-201ENSMUST00000095476 Cchcr1Q8K2I2 770 aa12.32□□□□□ -0.44
Lig4-201ENSMUST00000095476 Clstn1Q9EPL2 979 aa12.32□□□□□ -0.44
Lig4-201ENSMUST00000095476 Hvcn1Q3U2S8 269 aa12.32□□□□□ -0.44
Lig4-201ENSMUST00000095476 Gpatch3Q8BIY1 525 aa12.32□□□□□ -0.44
Lig4-201ENSMUST00000095476 Gcom1E9PZ54 550 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 MyzapQ3UIJ9 466 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms