RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Speer4f1Q9D5Q6 258 aa13.56□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Dennd4bQ3U1Y4 1499 aa13.56□□□□□ -0.24
Ldb3-205ENSMUST00000090040 PnisrA2AJT4 805 aaKnown RBP13.55□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Znf316Q6PGE4 1016 aa13.55□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Talpid3E9PV87 1520 aa13.55□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Synj2Q9D2G5 1434 aa13.55□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Hecw1Q8K4P8 1604 aa13.55□□□□□ -0.24
Ldb3-205ENSMUST00000090040 NudcO35685 332 aaKnown RBP13.55□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Abca8bQ8K440 1620 aa13.54□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Mug2P28666 1451 aa13.54□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Neurl4Q5NCX5 1563 aa13.54□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Birc3O08863 600 aa13.53□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Ptch1Q61115 1434 aa13.53□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Trim26Q99PN3 545 aa13.53□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Gm38655A0A286YDK6 273 aa13.53□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Rpgrip1lQ8CG73 1264 aa13.53□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Abcc3B2RX12 1523 aa13.52□□□□□ -0.24
Ldb3-205ENSMUST00000090040 PrxO55103 1391 aa13.52□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Abcc6Q9R1S7 1498 aa13.52□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Chd1P40201 1711 aa13.52□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Uggt2E9Q4X2 1504 aa13.51□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Ap3b2Q9JME5 1082 aa13.51□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Mbd3Q9Z2D8 285 aaKnown RBP13.51□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Rwdd1Q9CQK7 243 aa13.51□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Plch2A2AP18 1501 aa13.51□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Cul7Q8VE73 1689 aa13.51□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Sox12Q04890 314 aa13.5□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Rab3gap2Q8BMG7 1366 aa13.5□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Usp54Q8BL06 1588 aaKnown RBP13.5□□□□□ -0.25
Ldb3-205ENSMUST00000090040 GsdmaQ9EST1 446 aa13.5□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Rangap1P46061 589 aaKnown RBP13.49□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Slc4a2P13808 1237 aaKnown RBP13.49□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Gm32742A0A1B0GT42 1604 aa13.49□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Tsen2Q6P7W5 460 aa13.49□□□□□ -0.25
Ldb3-205ENSMUST00000090040 NpatQ8BMA5 1420 aa13.48□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Ppp2r1aQ76MZ3 589 aa13.48□□□□□ -0.25
Ldb3-205ENSMUST00000090040 CrbnQ8C7D2 445 aa13.48□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Kif1bQ60575 1816 aaKnown RBP13.48□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Naip6Q9JIB6 1403 aa13.48□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Nos1Q9Z0J4 1429 aa13.48□□□□□ -0.25
Ldb3-205ENSMUST00000090040 GphnQ8BUV3 769 aaKnown RBP13.47□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Edc4Q3UJB9 1406 aaKnown RBP13.46□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Zfyve16Q80U44 1528 aa13.46□□□□□ -0.25
Ldb3-205ENSMUST00000090040 Apbb1Q9QXJ1 710 aa13.46□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Cdk13Q69ZA1 1511 aaKnown RBP13.46□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Kif14L0N7N1 1674 aaKnown RBP13.45□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Depdc5P61460 1591 aa13.45□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Cdk19Q8BWD8 501 aa13.45□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Esx1O88933 382 aa13.44□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Trpm2Q91YD4 1506 aa13.44□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Atp10aO54827 1508 aa13.43□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Setbp1Q9Z180 1582 aa13.43□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Znf710Q3U288 666 aa13.43□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Ralbp1Q62172 648 aa13.43□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Q7TT23 1179 aa13.43□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Chmp4bQ9D8B3 224 aaKnown RBP13.42□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Hfm1D3Z4R1 1434 aa13.41□□□□□ -0.26
Ldb3-205ENSMUST00000090040 AatkQ80YE4 1365 aa13.41□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Efcab6Q6P1E8 1516 aa13.41□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Gm6268A2A3U9 297 aa13.41□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Fgd1P52734 960 aa13.41□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Rtf1A2AQ19 715 aaKnown RBP13.4□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Ciz1Q8VEH2 845 aa13.4□□□□□ -0.26
Ldb3-205ENSMUST00000090040 Dot1lQ6XZL8 1540 aa13.38□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Ccar1Q8CH18 1146 aaKnown RBP13.38□□□□□ -0.27
Ldb3-205ENSMUST00000090040 HnrnpmQ9D0E1 729 aaKnown RBP13.38□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Prrc2bQ7TPM1 1486 aaKnown RBP13.38□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Cabp4Q8VHC5 271 aa13.38□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Ccdc9Q8VC31 543 aaKnown RBP13.37□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Tarbp1E9Q368 1579 aa13.37□□□□□ -0.27
Ldb3-205ENSMUST00000090040 InsrP15208 1372 aa13.36□□□□□ -0.27
Ldb3-205ENSMUST00000090040 IbtkQ6ZPR6 1352 aaKnown RBP13.36□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Ksr2Q3UVC0 959 aa13.36□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Stk31Q99MW1 1018 aa13.36□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Sbno1Q689Z5 1390 aa13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 SafbD3YXK2 937 aaKnown RBP13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 HdgfP51859 237 aaKnown RBP13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 PalldQ9ET54 1408 aa13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 1700123L14RikQ3V2K7 440 aa13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Plin1Q8CGN5 517 aa13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 AnkarA2RT91 1465 aa13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Ak9G3UYQ4 1894 aa13.35□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Nphp4P59240 1425 aa13.34□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Yeats2Q3TUF7 1407 aa13.34□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Kdm5cP41230 1554 aa13.34□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Cald1E9QA15 768 aaKnown RBP13.34□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Gm21190A0A0G2JGJ6 266 aa13.33□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Rab11fip3Q8CHD8 1047 aa13.33□□□□□ -0.27
Ldb3-205ENSMUST00000090040 Zcchc11B2RX14 1644 aaKnown RBP13.33□□□□□ -0.28
Ldb3-205ENSMUST00000090040 1700019A02RikA0A087WPV9 146 aa13.33□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Mbd5B1AYB6 1498 aa13.33□□□□□ -0.28
Ldb3-205ENSMUST00000090040 U2surpQ6NV83 1029 aaKnown RBP13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Lrrc7Q80TE7 1490 aa13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Kif16bB1AVY7 1312 aa13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Skint5A7XUY5 1461 aa13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Fyb1O35601 819 aa13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Q3UJC8 639 aa13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Ccdc30Q8BVF4 654 aa13.32□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Irx6Q9ER75 438 aa13.31□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Cfap65Q3V0B4 1847 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms