RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Mre11Q61216 706 aa26.42■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Sh3bgrQ9WUZ7 214 aa26.42■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Usp16Q99LG0 825 aa26.41■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 VgfQ0VGU4 617 aa26.41■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Evc2Q8K1G2 1220 aa26.41■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Gsdma3Q5Y4Y6 464 aa26.4■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Tpm2P58774 284 aa26.4■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Ankrd36D3Z4K0 1415 aa26.39■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Shroom4Q1W617 1475 aa26.39■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Tpm4Q6IRU2 248 aa26.39■■□□□ 1.82
Smarcc1-201ENSMUST00000088716 Krt82Q99M74 516 aa26.39■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Gnai1B2RSH2 354 aa26.39■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Gnai3Q9DC51 354 aa26.39■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Ric3Q8BPM6 367 aa26.38■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Kif16bB1AVY7 1312 aa26.38■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Tpm1P58771 284 aa26.38■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Rfx1P48377 963 aa26.38■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Dhx16G3X8X0 1044 aaKnown RBP26.37■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 BccipQ9CWI3 316 aa26.37■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Rnf20Q5DTM8 973 aa26.36■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Ak7Q9D2H2 614 aa26.36■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Ccdc30Q8BVF4 654 aa26.34■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Ush1cQ9ES64 910 aa26.33■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Ttll5Q8CHB8 1328 aa26.33■■□□□ 1.81
Smarcc1-201ENSMUST00000088716 Swt1Q9DBQ9 907 aa26.33■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 PhaxQ9JJT9 385 aaKnown RBP26.32■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 A0A1L1SQF0 893 aa26.31■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Gabpb2P81069 414 aa26.31■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Rpgrip1lQ8CG73 1264 aa26.31■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 PnisrA2AJT4 805 aaKnown RBP26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Q8C5K5 320 aa26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Utp3Q9JI13 469 aaKnown RBP26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Polr1aO35134 1717 aaKnown RBP26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Neurod6P48986 337 aa26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Puf60Q3UEB3 564 aaKnown RBP26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Phactr2B1AVP0 632 aa26.3■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Rbm25B2RY56 838 aaKnown RBP26.29■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Cplx1P63040 134 aa26.29■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 FanciQ8K368 1330 aa26.28■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Pde4cQ3UEI1 686 aa26.28■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Rabep1O35551 862 aa26.28■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Erc2Q6PH08 957 aa26.28■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Prdm16A2A935 1275 aa26.28■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Rec8Q8C5S7 591 aa26.28■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Atl3Q91YH5 541 aa26.27■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Bicd2Q921C5 820 aa26.27■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Gprasp1Q5U4C1 1347 aa26.27■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Iqgap2Q3UQ44 1575 aa26.27■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Ipo7Q9EPL8 1038 aaKnown RBP26.27■■□□□ 1.8
Smarcc1-201ENSMUST00000088716 Q9D2X8 372 aa26.26■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 NexnQ7TPW1 607 aa26.26■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Odf2A3KGV1 830 aaKnown RBP26.26■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 CrcpO35427 148 aa26.25■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Hmox1P14901 289 aa26.25■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Smc3Q9CW03 1217 aaKnown RBP26.25■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Kif4P33174 1231 aa26.24■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Polr3gQ6NXY9 223 aa26.24■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Atp2b2Q9R0K7 1198 aa26.23■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Vps8Q0P5W1 1427 aa26.23■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Cfdp1O88271 295 aaKnown RBP26.23■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Ccp110Q7TSH4 1004 aa26.23■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Noc3lQ8VI84 807 aaKnown RBP26.23■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Nectin2P32507 530 aa26.22■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Sv2bQ8BG39 683 aa26.22■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Cetn4Q8K4K1 168 aa26.22■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Gripap1Q8VD04 806 aa26.22■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Pank1Q8K4K6 548 aa26.21■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 TatQ8QZR1 454 aa26.21■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Q9D9H8 365 aa26.21■■□□□ 1.79
Smarcc1-201ENSMUST00000088716 Efcab5A0JP43 1406 aa26.2■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Bcl11bQ99PV8 884 aa26.19■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Atf3Q60765 181 aa26.18■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Hook1Q8BIL5 728 aa26.18■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Top2aQ01320 1528 aaKnown RBP26.18■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Ift140E9PY46 1464 aa26.18■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Zpr1Q62384 459 aa26.17■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Drc7Q6V3W6 876 aa26.17■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Plekhh1Q80TI1 1356 aa26.17■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Sirt1Q923E4 737 aa26.17■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Chrna2Q91X60 512 aa26.17■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 BcanQ61361 883 aa26.16■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Nutm1Q8BHP2 1126 aa26.16■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Ccdc43Q9CR29 222 aaKnown RBP26.16■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Ftsj3Q9DBE9 838 aaKnown RBP26.16■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Cyp46a1Q9WVK8 500 aa26.16■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Bcl2l13P59017 434 aa26.15■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Arhgap5P97393 1501 aa26.15■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Eva1cP58659 440 aa26.15■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Prkrip1Q9CWV6 186 aaKnown RBP26.14■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Chmp4cQ9D7F7 232 aa26.14■■□□□ 1.78
Smarcc1-201ENSMUST00000088716 Gpatch3Q8BIY1 525 aa26.14■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Gm10471E9Q1C7 252 aa26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Mphosph10Q810V0 681 aaKnown RBP26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Cchcr1Q8K2I2 770 aa26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Ccdc171E9Q1U1 1324 aa26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Zfp644E9QA22 1323 aa26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Map7d2A2AG50 781 aa26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 FosbP13346 338 aa26.13■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Cd109Q8R422 1442 aa26.12■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 KarsQ99MN1 595 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms