RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 NrkQ9R0G8 1455 aa12.92□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Lamc3Q9R0B6 1581 aa12.92□□□□□ -0.34
Rtn3-204ENSMUST00000088171 UacaQ8CGB3 1411 aa12.91□□□□□ -0.34
Rtn3-204ENSMUST00000088171 A0A1L1SQF0 893 aa12.91□□□□□ -0.34
Rtn3-204ENSMUST00000088171 MycnP03966 462 aaKnown RBP12.91□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Map7d2A2AG50 781 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Plekhd1B2RPU2 505 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Top2bQ64511 1612 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Tpm1P58771 284 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Usp40Q8BWR4 1235 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Fam135aQ6NS59 1506 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Srek1Q8BZX4 494 aaKnown RBP12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Ttc5Q99LG4 440 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Mical1Q8VDP3 1048 aa12.9□□□□□ -0.34
Rtn3-204ENSMUST00000088171 1700123L14RikQ3V2K7 440 aa12.89□□□□□ -0.35
Rtn3-204ENSMUST00000088171 BcanQ61361 883 aa12.89□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Ccdc141E9Q8Q6 1531 aa12.89□□□□□ -0.35
Rtn3-204ENSMUST00000088171 AU015836B2RUM3 263 aa12.89□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Prl7d1P04769 244 aa12.89□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Fam163aQ8CAA5 168 aa12.89□□□□□ -0.35
Rtn3-204ENSMUST00000088171 ErbinQ80TH2 1402 aa12.88□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Fmnl2A2APV2 1086 aa12.88□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Cald1E9QA15 768 aaKnown RBP12.88□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Plagl1Q9JLQ4 704 aa12.87□□□□□ -0.35
Rtn3-204ENSMUST00000088171 FanciQ8K368 1330 aa12.87□□□□□ -0.35
Rtn3-204ENSMUST00000088171 March6Q6ZQ89 909 aa12.87□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Arhgap35Q91YM2 1499 aa12.87□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Gimap6Q8K349 305 aa12.87□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Sytl4Q9R0Q1 673 aa12.86□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Gm21698A0A087WQP8 267 aa12.86□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Gm21671G3UY31 267 aa12.86□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Gsto1O09131 240 aa12.86□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Cplx1P63040 134 aa12.86□□□□□ -0.35
Rtn3-204ENSMUST00000088171 PhaxQ9JJT9 385 aaKnown RBP12.86□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Cc2d1aQ8K1A6 943 aa12.85□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Trim29Q8R2Q0 587 aa12.85□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Gm156Q58A37 223 aa12.85□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Emilin2Q8K482 1074 aa12.85□□□□□ -0.35
Rtn3-204ENSMUST00000088171 BccipQ9CWI3 316 aa12.84□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Tom1O88746 492 aa12.84□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Kif7B7ZNG0 1348 aa12.84□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Rnf20Q5DTM8 973 aa12.84□□□□□ -0.35
Rtn3-204ENSMUST00000088171 GorabQ8BRM2 368 aa12.84□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Ccdc60Q8C4J0 545 aa12.84□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Cux1P53564 1515 aa12.83□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Ccdc146E9Q9F7 977 aa12.83□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Neurod6P48986 337 aa12.83□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Ncbp1Q3UYV9 790 aaKnown RBP12.83□□□□□ -0.35
Rtn3-204ENSMUST00000088171 TefQ9JLC6 301 aa12.83□□□□□ -0.35
Rtn3-204ENSMUST00000088171 Top2aQ01320 1528 aaKnown RBP12.83□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Arhgap5P97393 1501 aa12.83□□□□□ -0.36
Rtn3-204ENSMUST00000088171 TchhA0A0B4J1F9 1599 aa12.82□□□□□ -0.36
Rtn3-204ENSMUST00000088171 GsdmaQ9EST1 446 aa12.82□□□□□ -0.36
Rtn3-204ENSMUST00000088171 TkfcQ8VC30 578 aa12.82□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Trim34aQ99PP6 485 aa12.82□□□□□ -0.36
Rtn3-204ENSMUST00000088171 EspnQ9ET47 871 aa12.82□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Skap1Q3UUV5 355 aa12.82□□□□□ -0.36
Rtn3-204ENSMUST00000088171 RdxP26043 583 aaKnown RBP12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Hap1O35668 628 aa12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 G3bp1P97855 465 aaKnown RBP12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Eif2s2Q99L45 331 aaKnown RBP12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Q9D9H8 365 aa12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Atp2b2Q9R0K7 1198 aa12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Cfdp1O88271 295 aaKnown RBP12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 HypkQ9CR41 129 aa12.81□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Erich6bQ9D4S6 220 aa12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Mfap1aC0HKD8 439 aaKnown RBP12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Mfap1bC0HKD9 439 aaKnown RBP12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Spryd3E9Q9B3 442 aa12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Exoc6Q8R313 802 aa12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Mapk8ip1Q9WVI9 707 aa12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Grin2bQ01097 1482 aa12.8□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Stard3nlQ9DCI3 235 aa12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Gm7298A0A0N4SVU1 1476 aa12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Necab1Q8BG18 352 aa12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Gm21680A0A0G2JGR8 267 aa12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Ehmt1Q5DW34 1296 aa12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Tcerg1Q8CGF7 1100 aaKnown RBP12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Cspp1B2RX88 1205 aa12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Ftsj3Q9DBE9 838 aaKnown RBP12.79□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Rad54l2Q99NG0 1466 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Nap1l3Q794H2 544 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 GlmnQ8BZM1 596 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Rapgef4Q9EQZ6 1011 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 AqrQ8CFQ3 1481 aaKnown RBP12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Erc2Q6PH08 957 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Rbm28Q8CGC6 750 aaKnown RBP12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 OptnQ8K3K8 584 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 CrbnQ8C7D2 445 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Dnajc5bQ9CQ94 199 aa12.78□□□□□ -0.36
Rtn3-204ENSMUST00000088171 BicraF8VPZ9 1578 aa12.77□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Cnnm1Q0GA42 951 aa12.77□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Ell2Q3UKU1 639 aa12.77□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Hook1Q8BIL5 728 aa12.77□□□□□ -0.36
Rtn3-204ENSMUST00000088171 Fam184bQ0KK56 942 aa12.77□□□□□ -0.37
Rtn3-204ENSMUST00000088171 4930572O03RikQ8C5Y0 211 aa12.77□□□□□ -0.37
Rtn3-204ENSMUST00000088171 Kdm2bQ6P1G2 1309 aa12.77□□□□□ -0.37
Rtn3-204ENSMUST00000088171 PsapQ61207 557 aaKnown RBP12.77□□□□□ -0.37
Rtn3-204ENSMUST00000088171 IkQ9Z1M8 557 aaKnown RBP12.77□□□□□ -0.37
Rtn3-204ENSMUST00000088171 OvosQ3UU35 1456 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms