RNA–Protein interactions for RNA: ENSMUST00000077569.10

Smarca1-201, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-201ENSMUST00000077569 Catsper2A2ARP9 588 aa11.09□□□□□ -0.63
Smarca1-201ENSMUST00000077569 Ccdc60Q8C4J0 545 aa11.09□□□□□ -0.63
Smarca1-201ENSMUST00000077569 Smc5Q8CG46 1101 aaKnown RBP11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Kiaa1211Q5PR69 1207 aa11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Cc2d1aQ8K1A6 943 aa11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 CastP51125 788 aa11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Anp32eP97822 260 aaKnown RBP11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Isy1Q69ZQ2 285 aaKnown RBP11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Safb2Q80YR5 991 aaKnown RBP11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Atp2b2Q9R0K7 1198 aa11.08□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Map4P27546 1125 aaKnown RBP11.07□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Pibf1E9Q6K3 756 aa11.07□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Tnnt1O88346 262 aa11.07□□□□□ -0.64
Smarca1-201ENSMUST00000077569 A0A0U1RNP2 1173 aa11.07□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Cald1E9QA15 768 aaKnown RBP11.07□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Filip1lQ6P6L0 1131 aa11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Srpk2O54781 681 aaKnown RBP11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Clstn2Q9ER65 966 aa11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Exosc9Q9JHI7 438 aaKnown RBP11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Pank2Q3U4S0 443 aa11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Clcn1Q64347 994 aa11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 St18Q80TY4 1045 aa11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Ccar1Q8CH18 1146 aaKnown RBP11.06□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Rcan3Q9JKK0 239 aa11.05□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Fmn1Q05860 1466 aa11.05□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Stk24Q99KH8 431 aa11.05□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Plekhh1Q80TI1 1356 aa11.04□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Zscan10Q3URR7 782 aa11.04□□□□□ -0.64
Smarca1-201ENSMUST00000077569 UacaQ8CGB3 1411 aa11.04□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Sh3bgrQ9WUZ7 214 aa11.04□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Rock2P70336 1388 aa11.04□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Kif27Q7M6Z4 1394 aa11.04□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Wdr62Q3U3T8 1523 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Ccdc173A0JLY1 547 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Gzf1Q4VBD9 706 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Iffo2Q8R2V2 512 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Pes1Q9EQ61 584 aaKnown RBP11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 BbxQ8VBW5 907 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 HnrnpuQ8VEK3 800 aaKnown RBP11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Sytl4Q9R0Q1 673 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Q9D2X8 372 aa11.03□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Cpa2Q504N0 417 aa11.02□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Phf23Q8BSN5 401 aa11.02□□□□□ -0.64
Smarca1-201ENSMUST00000077569 Znf526Q8BI66 675 aa11.02□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Dhx16G3X8X0 1044 aaKnown RBP11.02□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Sass6Q80UK7 654 aa11.02□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Srcin1Q9QWI6 1250 aa11.02□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Mad1l1Q9WTX8 717 aaKnown RBP11.02□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Terf2O35144 541 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Kif18aQ91WD7 886 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Ccdc94Q9D6J3 314 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 PnnO35691 725 aaKnown RBP11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Tshz2Q68FE9 1030 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Ift57Q8BXG3 429 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Erich4Q3UNU4 136 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Kiaa0753Q6A000 959 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Atl3Q91YH5 541 aa11.01□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Atad2bE9Q166 1460 aaKnown RBP11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 SetQ9EQU5 289 aaKnown RBP11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Lekr1B2RVN1 116 aa11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Cdkn1cP49919 348 aa11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Glipr1l2Q9CQ35 332 aa11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Kif7B7ZNG0 1348 aa11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Lamc3Q9R0B6 1581 aa11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Zkscan1Q8BGS3 561 aaKnown RBP11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Rassf8Q8CJ96 419 aa11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 EzrP26040 586 aaKnown RBP11□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Ankrd36D3Z4K0 1415 aa10.99□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Triml2E9PW10 424 aa10.99□□□□□ -0.65
Smarca1-201ENSMUST00000077569 U2af2P26369 475 aaKnown RBP10.99□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Stag3O70576 1240 aa10.99□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Sh3bp5Q9Z131 463 aa10.99□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Brpf1B2RRD7 1212 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Usp48Q3V0C5 1052 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Eif4g2Q62448 906 aaKnown RBP10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 4931400O07RikQ9D4M5 137 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Kif15Q6P9L6 1387 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 FosbP13346 338 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Tsen2Q6P7W5 460 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 G3bp1P97855 465 aaKnown RBP10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Bicd2Q921C5 820 aa10.98□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Ccnb3Q810T2 1396 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Rasa1E9PYG6 1038 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Atp6v1dP57746 247 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Bag4Q8CI61 457 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Wdr78E9PYY5 807 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Sh3bp1P55194 680 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Utp14aQ640M1 767 aaKnown RBP10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Kank1E9Q238 1360 aa10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Dhx29Q6PGC1 1365 aaKnown RBP10.97□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Frmpd1A2AKB4 1549 aa10.96□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Erbb3Q61526 1339 aa10.96□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Mcm3P25206 812 aaKnown RBP10.96□□□□□ -0.65
Smarca1-201ENSMUST00000077569 SkilQ60665 675 aa10.96□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Apaf1O88879 1249 aa10.96□□□□□ -0.65
Smarca1-201ENSMUST00000077569 Samm50Q8BGH2 469 aa10.96□□□□□ -0.66
Smarca1-201ENSMUST00000077569 Tmx1Q8VBT0 278 aa10.96□□□□□ -0.66
Smarca1-201ENSMUST00000077569 Clstn1Q9EPL2 979 aa10.96□□□□□ -0.66
Smarca1-201ENSMUST00000077569 Aplp1Q03157 653 aa10.95□□□□□ -0.66
Smarca1-201ENSMUST00000077569 Nap1l3Q794H2 544 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms