RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Tsen2Q6P7W5 460 aa15.03■□□□□ -0
Vcpip1-201ENSMUST00000057438 Ccdc43Q9CR29 222 aaKnown RBP15.03■□□□□ -0
Vcpip1-201ENSMUST00000057438 Ankrd36D3Z4K0 1415 aa15.02■□□□□ -0
Vcpip1-201ENSMUST00000057438 Tomm22Q9CPQ3 142 aa15.02■□□□□ -0
Vcpip1-201ENSMUST00000057438 Ap3b2Q9JME5 1082 aa15.02■□□□□ -0
Vcpip1-201ENSMUST00000057438 Rrp9Q91WM3 475 aaKnown RBP15.02■□□□□ -0
Vcpip1-201ENSMUST00000057438 Trim58Q5NCC9 485 aa15.02□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Sin3aQ60520 1274 aaKnown RBP15.02□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Arid4aF8VPQ2 1261 aaKnown RBP15.01□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Wdr78E9PYY5 807 aa15.01□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Txndc2Q6P902 515 aa15.01□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Ccdc60Q8C4J0 545 aa15□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Slc4a1apE9PX68 744 aa15□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Smc3Q9CW03 1217 aaKnown RBP15□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Cabp1Q9JLK7 227 aa15□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Cdkn1cP49919 348 aa15□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Ccdc88bQ4QRL3 1481 aa15□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Cetn4Q8K4K1 168 aa14.99□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Erc2Q6PH08 957 aa14.99□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Cc2d2aQ8CFW7 1633 aa14.99□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Fam193aQ8CGI1 1231 aaKnown RBP14.99□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Nolc1E9Q5C9 702 aaKnown RBP14.99□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 UvssaQ9D479 717 aa14.98□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 PdcQ9QW08 244 aa14.98□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 AppP12023 770 aa14.98□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 G3bp1P97855 465 aaKnown RBP14.98□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Rfx1P48377 963 aa14.97□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 GsdmaQ9EST1 446 aa14.97□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Gps2Q921N8 327 aa14.97□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Prm3Q62100 101 aa14.97□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 MlecQ6ZQI3 291 aaKnown RBP14.96□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Ak7Q9D2H2 614 aa14.96□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Trim29Q8R2Q0 587 aa14.96□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Pibf1E9Q6K3 756 aa14.96□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Lrrcc1Q69ZB0 1026 aa14.96□□□□□ -0.01
Vcpip1-201ENSMUST00000057438 Cep112Q5PR68 954 aa14.96□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Plekhh1Q80TI1 1356 aa14.95□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Psma5Q9Z2U1 241 aaKnown RBP14.95□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Ccnb3Q810T2 1396 aa14.95□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 WrnO09053 1401 aa14.95□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Ppm1fQ8CGA0 452 aa14.95□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Pank3Q8R2W9 370 aa14.95□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Smc2Q8CG48 1191 aaKnown RBP14.94□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Crybg2B7ZCC2 1516 aa14.94□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 March6Q6ZQ89 909 aa14.94□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Sox12Q04890 314 aa14.93□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Def6Q8C2K1 630 aa14.93□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Ncoa2Q61026 1462 aa14.92□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Ppp4r3bQ922R5 820 aa14.92□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Prkrip1Q9CWV6 186 aaKnown RBP14.92□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Dapk1Q80YE7 1442 aa14.92□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 ScribQ80U72 1612 aa14.91□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Polr3gQ6NXY9 223 aa14.91□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Mcm2P97310 904 aa14.91□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Erlin2Q8BFZ9 340 aa14.91□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Eif2s2Q99L45 331 aaKnown RBP14.91□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Hoxa7P02830 229 aa14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Luc7lQ9CYI4 371 aaKnown RBP14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Phactr2B1AVP0 632 aa14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Nap1l1P28656 391 aaKnown RBP14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Kiaa0753Q6A000 959 aa14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 AnlnQ8K298 1121 aaKnown RBP14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Smarca2Q6DIC0 1577 aa14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Cfap99A0A140LIX9 648 aa14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Nop14Q8R3N1 860 aaKnown RBP14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Ipo4Q8VI75 1082 aa14.9□□□□□ -0.02
Vcpip1-201ENSMUST00000057438 Carmil1Q6EDY6 1374 aa14.89□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Ccp110Q7TSH4 1004 aa14.89□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Znf771Q8BJ90 317 aa14.89□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Phf14Q9D4H9 881 aa14.89□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Ints3Q7TPD0 1041 aaKnown RBP14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Podxl2Q8CAE9 603 aa14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Fan1Q69ZT1 1020 aa14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Mrvi1Q9WUX5 899 aaKnown RBP14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Pip4k2aO70172 405 aa14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Sycp1Q62209 993 aa14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Cux2P70298 1426 aa14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 CrcpO35427 148 aa14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Hnrnpul1Q8VDM6 859 aaKnown RBP14.88□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Fam184bQ0KK56 942 aa14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Kif3bQ61771 747 aa14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 1700010I14RikQ7TPG0 532 aa14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Ccdc171E9Q1U1 1324 aa14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Fam13bQ8K2H3 851 aa14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Synj1Q8CHC4 1574 aa14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Smarca4Q3TKT4 1613 aaKnown RBP14.87□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Rapgef2Q8CHG7 1496 aa14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Gsdma3Q5Y4Y6 464 aa14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 NexnQ7TPW1 607 aa14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Chmp7Q8R1T1 451 aa14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Phldb2Q8K1N2 1249 aa14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Dhx29Q6PGC1 1365 aaKnown RBP14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Tubb6Q922F4 447 aa14.86□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Trim55G3X8Y1 545 aa14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Pak3Q61036 559 aa14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Tmco3Q8BH01 678 aa14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Mad1l1Q9WTX8 717 aaKnown RBP14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Dhx16G3X8X0 1044 aaKnown RBP14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Cabp4Q8VHC5 271 aa14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Gnai1B2RSH2 354 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms