RNA–Protein interactions for RNA: ENSMUST00000040188.14

Ska1-201, Transcript of Spindle and kinetochore-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ska1, Length 2,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1-201ENSMUST00000040188 PtprtQ99M80 1454 aa18.5■□□□□ 0.55
Ska1-201ENSMUST00000040188 Xrn1P97789 1719 aaKnown RBP18.5■□□□□ 0.55
Ska1-201ENSMUST00000040188 Fam184bQ0KK56 942 aa18.49■□□□□ 0.55
Ska1-201ENSMUST00000040188 Kank1E9Q238 1360 aa18.49■□□□□ 0.55
Ska1-201ENSMUST00000040188 Ppp2r1aQ76MZ3 589 aa18.48■□□□□ 0.55
Ska1-201ENSMUST00000040188 Ylpm1Q9R0I7 1386 aaKnown RBP18.48■□□□□ 0.55
Ska1-201ENSMUST00000040188 CrbnQ8C7D2 445 aa18.48■□□□□ 0.55
Ska1-201ENSMUST00000040188 Srpk2O54781 681 aaKnown RBP18.46■□□□□ 0.55
Ska1-201ENSMUST00000040188 Zfyve16Q80U44 1528 aa18.46■□□□□ 0.55
Ska1-201ENSMUST00000040188 Gtf2e1Q9D0D5 440 aa18.46■□□□□ 0.55
Ska1-201ENSMUST00000040188 Usp40Q8BWR4 1235 aa18.46■□□□□ 0.54
Ska1-201ENSMUST00000040188 Abca17E9PX95 1733 aa18.45■□□□□ 0.54
Ska1-201ENSMUST00000040188 ErbinQ80TH2 1402 aa18.44■□□□□ 0.54
Ska1-201ENSMUST00000040188 Zmym4A2A791 1549 aaKnown RBP18.44■□□□□ 0.54
Ska1-201ENSMUST00000040188 Nos1Q9Z0J4 1429 aa18.43■□□□□ 0.54
Ska1-201ENSMUST00000040188 Cnga1P29974 684 aa18.43■□□□□ 0.54
Ska1-201ENSMUST00000040188 Plch2A2AP18 1501 aa18.42■□□□□ 0.54
Ska1-201ENSMUST00000040188 Abca9Q8K449 1623 aa18.42■□□□□ 0.54
Ska1-201ENSMUST00000040188 Gm16486A0A1D5RMD1 1434 aa18.41■□□□□ 0.54
Ska1-201ENSMUST00000040188 PrkcshO08795 521 aa18.41■□□□□ 0.54
Ska1-201ENSMUST00000040188 Egfem1Q8C088 590 aa18.41■□□□□ 0.54
Ska1-201ENSMUST00000040188 Myo5cE9Q1F5 1742 aa18.4■□□□□ 0.54
Ska1-201ENSMUST00000040188 Dcaf11Q91VU6 549 aa18.4■□□□□ 0.54
Ska1-201ENSMUST00000040188 Tex14Q7M6U3 1450 aa18.4■□□□□ 0.54
Ska1-201ENSMUST00000040188 Sbno1Q689Z5 1390 aa18.39■□□□□ 0.54
Ska1-201ENSMUST00000040188 NeflP08551 543 aa18.39■□□□□ 0.54
Ska1-201ENSMUST00000040188 Kif7B7ZNG0 1348 aa18.39■□□□□ 0.53
Ska1-201ENSMUST00000040188 Upf2A2AT37 1269 aaKnown RBP18.39■□□□□ 0.53
Ska1-201ENSMUST00000040188 Tcerg1Q8CGF7 1100 aaKnown RBP18.38■□□□□ 0.53
Ska1-201ENSMUST00000040188 Abca6Q8K441 1624 aa18.38■□□□□ 0.53
Ska1-201ENSMUST00000040188 Rtl5Q5DTT4 599 aa18.38■□□□□ 0.53
Ska1-201ENSMUST00000040188 Nlrp6Q91WS2 869 aa18.38■□□□□ 0.53
Ska1-201ENSMUST00000040188 Kif16bB1AVY7 1312 aa18.38■□□□□ 0.53
Ska1-201ENSMUST00000040188 AatkQ80YE4 1365 aa18.38■□□□□ 0.53
Ska1-201ENSMUST00000040188 Rab3gap2Q8BMG7 1366 aa18.37■□□□□ 0.53
Ska1-201ENSMUST00000040188 Uggt2E9Q4X2 1504 aa18.37■□□□□ 0.53
Ska1-201ENSMUST00000040188 AnkarA2RT91 1465 aa18.36■□□□□ 0.53
Ska1-201ENSMUST00000040188 Znf518aB2RRF6 1478 aaKnown RBP18.36■□□□□ 0.53
Ska1-201ENSMUST00000040188 Neurod2Q62414 383 aa18.36■□□□□ 0.53
Ska1-201ENSMUST00000040188 Apbb1Q9QXJ1 710 aa18.35■□□□□ 0.53
Ska1-201ENSMUST00000040188 Puf60Q3UEB3 564 aaKnown RBP18.34■□□□□ 0.53
Ska1-201ENSMUST00000040188 Myo3aQ8K3H5 1613 aa18.34■□□□□ 0.53
Ska1-201ENSMUST00000040188 Fndc1E9Q043 1732 aa18.33■□□□□ 0.53
Ska1-201ENSMUST00000040188 Pola1P33609 1465 aa18.33■□□□□ 0.52
Ska1-201ENSMUST00000040188 Speer4f1Q9D5Q6 258 aa18.32■□□□□ 0.52
Ska1-201ENSMUST00000040188 Amer1Q7TS75 1132 aa18.31■□□□□ 0.52
Ska1-201ENSMUST00000040188 Ptch1Q61115 1434 aa18.31■□□□□ 0.52
Ska1-201ENSMUST00000040188 Ak9G3UYQ4 1894 aa18.3■□□□□ 0.52
Ska1-201ENSMUST00000040188 Iqgap3F8VQ29 1632 aa18.3■□□□□ 0.52
Ska1-201ENSMUST00000040188 Arid4bA2CG63 1314 aaKnown RBP18.3■□□□□ 0.52
Ska1-201ENSMUST00000040188 Stag3O70576 1240 aa18.29■□□□□ 0.52
Ska1-201ENSMUST00000040188 Prkrip1Q9CWV6 186 aaKnown RBP18.29■□□□□ 0.52
Ska1-201ENSMUST00000040188 Col17a1Q07563 1470 aa18.29■□□□□ 0.52
Ska1-201ENSMUST00000040188 OvosQ3UU35 1456 aa18.29■□□□□ 0.52
Ska1-201ENSMUST00000040188 Tmem131lQ3U3D7 1597 aa18.27■□□□□ 0.52
Ska1-201ENSMUST00000040188 Prex1Q69ZK0 1650 aa18.26■□□□□ 0.51
Ska1-201ENSMUST00000040188 AU022751B1B0V2 589 aa18.26■□□□□ 0.51
Ska1-201ENSMUST00000040188 Stard8Q8K031 1019 aa18.26■□□□□ 0.51
Ska1-201ENSMUST00000040188 Pabpn1Q8CCS6 302 aaKnown RBP18.26■□□□□ 0.51
Ska1-201ENSMUST00000040188 Nphp4P59240 1425 aa18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 Cep152A2AUM9 1736 aaKnown RBP18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 B4galnt3Q6L8S8 986 aa18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 Rwdd1Q9CQK7 243 aa18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 Atf7ipQ7TT18 1306 aa18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 Rims1Q99NE5 1463 aa18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 Gli2Q0VGT2 1544 aa18.24■□□□□ 0.51
Ska1-201ENSMUST00000040188 Itsn2Q9Z0R6 1659 aa18.23■□□□□ 0.51
Ska1-201ENSMUST00000040188 Abca8aQ8K442 1620 aa18.23■□□□□ 0.51
Ska1-201ENSMUST00000040188 Ccdc30Q8BVF4 654 aa18.23■□□□□ 0.51
Ska1-201ENSMUST00000040188 Golga2Q921M4 999 aa18.23■□□□□ 0.51
Ska1-201ENSMUST00000040188 Stk26Q99JT2 416 aa18.22■□□□□ 0.51
Ska1-201ENSMUST00000040188 Dbr1Q923B1 550 aa18.21■□□□□ 0.51
Ska1-201ENSMUST00000040188 Mink1Q9JM52 1308 aa18.21■□□□□ 0.51
Ska1-201ENSMUST00000040188 Atp1b4Q99ME6 356 aa18.21■□□□□ 0.51
Ska1-201ENSMUST00000040188 Cdk5rap2Q8K389 1822 aa18.2■□□□□ 0.5
Ska1-201ENSMUST00000040188 Gas2l2Q5SSG4 860 aa18.2■□□□□ 0.5
Ska1-201ENSMUST00000040188 Kdm5aQ3UXZ9 1690 aa18.2■□□□□ 0.5
Ska1-201ENSMUST00000040188 Usp19Q3UJD6 1360 aa18.2■□□□□ 0.5
Ska1-201ENSMUST00000040188 Adgrb3Q80ZF8 1522 aa18.19■□□□□ 0.5
Ska1-201ENSMUST00000040188 Ttll13A4Q9F6 804 aa18.19■□□□□ 0.5
Ska1-201ENSMUST00000040188 Gm156Q58A37 223 aa18.18■□□□□ 0.5
Ska1-201ENSMUST00000040188 Zranb1Q7M760 708 aa18.18■□□□□ 0.5
Ska1-201ENSMUST00000040188 Topbp1Q6ZQF0 1515 aa18.18■□□□□ 0.5
Ska1-201ENSMUST00000040188 Kiaa1107Q80TK0 1369 aa18.18■□□□□ 0.5
Ska1-201ENSMUST00000040188 Plekhh1Q80TI1 1356 aa18.17■□□□□ 0.5
Ska1-201ENSMUST00000040188 Ipo9Q91YE6 1041 aa18.17■□□□□ 0.5
Ska1-201ENSMUST00000040188 IqubQ8CDK3 788 aa18.16■□□□□ 0.5
Ska1-201ENSMUST00000040188 P2rx7Q9Z1M0 595 aa18.16■□□□□ 0.5
Ska1-201ENSMUST00000040188 Ehbp1l1Q99MS7 1716 aa18.15■□□□□ 0.5
Ska1-201ENSMUST00000040188 Efcab6Q6P1E8 1516 aa18.14■□□□□ 0.49
Ska1-201ENSMUST00000040188 ChgaP26339 463 aaKnown RBP18.13■□□□□ 0.49
Ska1-201ENSMUST00000040188 Uspl1Q3ULM6 1089 aa18.13■□□□□ 0.49
Ska1-201ENSMUST00000040188 Atxn3Q9CVD2 355 aa18.13■□□□□ 0.49
Ska1-201ENSMUST00000040188 TnikP83510 1323 aa18.13■□□□□ 0.49
Ska1-201ENSMUST00000040188 Ttc41Q692V3 1318 aa18.13■□□□□ 0.49
Ska1-201ENSMUST00000040188 Myom2Q14BI5 1463 aa18.12■□□□□ 0.49
Ska1-201ENSMUST00000040188 Atp10aO54827 1508 aa18.12■□□□□ 0.49
Ska1-201ENSMUST00000040188 Clasp1Q80TV8 1535 aaKnown RBP18.12■□□□□ 0.49
Ska1-201ENSMUST00000040188 Mbd3Q9Z2D8 285 aaKnown RBP18.11■□□□□ 0.49
Ska1-201ENSMUST00000040188 Talpid3E9PV87 1520 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms