RNA–Protein interactions for RNA: ENSMUST00000031817.9

Herc6-201, Transcript of E3 ISG15--protein ligase Herc6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Herc6, Length 4,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6-201ENSMUST00000031817 Ttc21bQ0HA38 1315 aa13.31□□□□□ -0.28
Herc6-201ENSMUST00000031817 Ythdc1E9Q5K9 736 aaKnown RBP13.31□□□□□ -0.28
Herc6-201ENSMUST00000031817 DroshaQ5HZJ0 1373 aaKnown RBP13.31□□□□□ -0.28
Herc6-201ENSMUST00000031817 Chmp7Q8R1T1 451 aa13.31□□□□□ -0.28
Herc6-201ENSMUST00000031817 Rab3gap2Q8BMG7 1366 aa13.3□□□□□ -0.28
Herc6-201ENSMUST00000031817 Gnai1B2RSH2 354 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Ipo8Q7TMY7 1010 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Q8BT18 775 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Gnai3Q9DC51 354 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Rassf8Q8CJ96 419 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Slx4Q6P1D7 1565 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Pla2r1Q62028 1487 aa13.29□□□□□ -0.28
Herc6-201ENSMUST00000031817 Dnai1Q8C0M8 701 aa13.28□□□□□ -0.28
Herc6-201ENSMUST00000031817 TatQ8QZR1 454 aa13.28□□□□□ -0.28
Herc6-201ENSMUST00000031817 Swt1Q9DBQ9 907 aa13.28□□□□□ -0.28
Herc6-201ENSMUST00000031817 PnnO35691 725 aaKnown RBP13.28□□□□□ -0.28
Herc6-201ENSMUST00000031817 Eif4g1Q6NZJ6 1600 aaKnown RBP13.27□□□□□ -0.28
Herc6-201ENSMUST00000031817 Casc1Q6TDU8 730 aa13.27□□□□□ -0.28
Herc6-201ENSMUST00000031817 GphnQ8BUV3 769 aaKnown RBP13.27□□□□□ -0.28
Herc6-201ENSMUST00000031817 Asxl1P59598 1514 aa13.27□□□□□ -0.28
Herc6-201ENSMUST00000031817 MecomP14404 1042 aa13.27□□□□□ -0.29
Herc6-201ENSMUST00000031817 Trim58Q5NCC9 485 aa13.27□□□□□ -0.29
Herc6-201ENSMUST00000031817 Senp3Q9EP97 568 aaKnown RBP13.27□□□□□ -0.29
Herc6-201ENSMUST00000031817 Ppp2r1aQ76MZ3 589 aa13.27□□□□□ -0.29
Herc6-201ENSMUST00000031817 Rapgef6Q5NCJ1 1609 aa13.26□□□□□ -0.29
Herc6-201ENSMUST00000031817 Ccdc30Q8BVF4 654 aa13.26□□□□□ -0.29
Herc6-201ENSMUST00000031817 Chmp3Q9CQ10 224 aa13.26□□□□□ -0.29
Herc6-201ENSMUST00000031817 Samd9lQ69Z37 1561 aa13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 Ncoa3O09000 1398 aa13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 Thoc2B1AZI6 1594 aaKnown RBP13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 AI481877A2ALV5 1481 aa13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 Smc4Q8CG47 1286 aa13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 Ythdc2B2RR83 1445 aaKnown RBP13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 WizO88286 1684 aaKnown RBP13.25□□□□□ -0.29
Herc6-201ENSMUST00000031817 Gm1043A0A140LJC2 1431 aa13.24□□□□□ -0.29
Herc6-201ENSMUST00000031817 Ylpm1Q9R0I7 1386 aaKnown RBP13.24□□□□□ -0.29
Herc6-201ENSMUST00000031817 Sirt1Q923E4 737 aa13.24□□□□□ -0.29
Herc6-201ENSMUST00000031817 Cdk19Q8BWD8 501 aa13.24□□□□□ -0.29
Herc6-201ENSMUST00000031817 PxdnQ3UQ28 1475 aa13.23□□□□□ -0.29
Herc6-201ENSMUST00000031817 Shroom2A2ALU4 1481 aa13.23□□□□□ -0.29
Herc6-201ENSMUST00000031817 Mfap1aC0HKD8 439 aaKnown RBP13.23□□□□□ -0.29
Herc6-201ENSMUST00000031817 Mfap1bC0HKD9 439 aaKnown RBP13.23□□□□□ -0.29
Herc6-201ENSMUST00000031817 Pip4k2bQ80XI4 416 aa13.23□□□□□ -0.29
Herc6-201ENSMUST00000031817 Gimap6Q8K349 305 aa13.23□□□□□ -0.29
Herc6-201ENSMUST00000031817 Kif21aQ9QXL2 1672 aa13.22□□□□□ -0.29
Herc6-201ENSMUST00000031817 Clstn1Q9EPL2 979 aa13.22□□□□□ -0.29
Herc6-201ENSMUST00000031817 Polr3aB2RXC6 1390 aa13.22□□□□□ -0.29
Herc6-201ENSMUST00000031817 Smarce1O54941 411 aaKnown RBP13.22□□□□□ -0.29
Herc6-201ENSMUST00000031817 Usp16Q99LG0 825 aa13.22□□□□□ -0.29
Herc6-201ENSMUST00000031817 Mapkbp1Q6NS57 1503 aa13.21□□□□□ -0.29
Herc6-201ENSMUST00000031817 BC005561E9Q5E2 1589 aa13.21□□□□□ -0.29
Herc6-201ENSMUST00000031817 Cavin4A2AMM0 362 aa13.21□□□□□ -0.29
Herc6-201ENSMUST00000031817 Plekhh1Q80TI1 1356 aa13.21□□□□□ -0.3
Herc6-201ENSMUST00000031817 Slc4a10Q5DTL9 1118 aa13.21□□□□□ -0.3
Herc6-201ENSMUST00000031817 HypkQ9CR41 129 aa13.2□□□□□ -0.3
Herc6-201ENSMUST00000031817 Dnai2A2AC93 623 aa13.2□□□□□ -0.3
Herc6-201ENSMUST00000031817 Brpf1B2RRD7 1212 aa13.2□□□□□ -0.3
Herc6-201ENSMUST00000031817 Gm156Q58A37 223 aa13.2□□□□□ -0.3
Herc6-201ENSMUST00000031817 Bcl11bQ99PV8 884 aa13.2□□□□□ -0.3
Herc6-201ENSMUST00000031817 Ccdc171E9Q1U1 1324 aa13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Iffo2Q8R2V2 512 aa13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Kif16bB1AVY7 1312 aa13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Fmnl2A2APV2 1086 aa13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Rbm25B2RY56 838 aaKnown RBP13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 IbtkQ6ZPR6 1352 aaKnown RBP13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Ipo9Q91YE6 1041 aa13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Rprd2Q6NXI6 1469 aaKnown RBP13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Tceal9Q9DD24 104 aa13.19□□□□□ -0.3
Herc6-201ENSMUST00000031817 Ccdc146E9Q9F7 977 aa13.18□□□□□ -0.3
Herc6-201ENSMUST00000031817 Nup160Q9Z0W3 1402 aaKnown RBP13.18□□□□□ -0.3
Herc6-201ENSMUST00000031817 Atp6v1dP57746 247 aa13.18□□□□□ -0.3
Herc6-201ENSMUST00000031817 Q7TT23 1179 aa13.18□□□□□ -0.3
Herc6-201ENSMUST00000031817 Evi5lH3BKQ3 813 aa13.17□□□□□ -0.3
Herc6-201ENSMUST00000031817 Zpr1Q62384 459 aa13.17□□□□□ -0.3
Herc6-201ENSMUST00000031817 HnrnpmQ9D0E1 729 aaKnown RBP13.17□□□□□ -0.3
Herc6-201ENSMUST00000031817 Pik3c2gO70167 1506 aa13.16□□□□□ -0.3
Herc6-201ENSMUST00000031817 Gm10471E9Q1C7 252 aa13.16□□□□□ -0.3
Herc6-201ENSMUST00000031817 Ric3Q8BPM6 367 aa13.16□□□□□ -0.3
Herc6-201ENSMUST00000031817 Washc2Q6PGL7 1334 aa13.16□□□□□ -0.3
Herc6-201ENSMUST00000031817 Gapvd1Q6PAR5 1458 aa13.16□□□□□ -0.3
Herc6-201ENSMUST00000031817 Dennd6aQ8BH65 605 aa13.16□□□□□ -0.3
Herc6-201ENSMUST00000031817 Slc4a2P13808 1237 aaKnown RBP13.15□□□□□ -0.3
Herc6-201ENSMUST00000031817 GorabQ8BRM2 368 aa13.15□□□□□ -0.3
Herc6-201ENSMUST00000031817 Atl3Q91YH5 541 aa13.15□□□□□ -0.3
Herc6-201ENSMUST00000031817 Gprasp1Q5U4C1 1347 aa13.15□□□□□ -0.3
Herc6-201ENSMUST00000031817 PrxO55103 1391 aa13.15□□□□□ -0.3
Herc6-201ENSMUST00000031817 Abcc1O35379 1528 aa13.15□□□□□ -0.3
Herc6-201ENSMUST00000031817 R3hcc1Q8BSI6 488 aa13.15□□□□□ -0.31
Herc6-201ENSMUST00000031817 Fchsd2Q3USJ8 740 aa13.14□□□□□ -0.31
Herc6-201ENSMUST00000031817 Pbrm1Q8BSQ9 1634 aaKnown RBP13.14□□□□□ -0.31
Herc6-201ENSMUST00000031817 Wdr7Q920I9 1489 aa13.13□□□□□ -0.31
Herc6-201ENSMUST00000031817 3425401B19RikD3Z1D3 1412 aa13.13□□□□□ -0.31
Herc6-201ENSMUST00000031817 Triml2E9PW10 424 aa13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 Gnl3lQ6PGG6 577 aaKnown RBP13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 Cfap74Q3UY96 1578 aa13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 CatipB9EKE5 520 aa13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 Sv2bQ8BG39 683 aa13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 Prex2Q3LAC4 1598 aa13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 Anapc15P60007 132 aa13.12□□□□□ -0.31
Herc6-201ENSMUST00000031817 Zranb3Q6NZP1 1069 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms