RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Depdc5P61460 1591 aa27.32■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 Abca8aQ8K442 1620 aa27.32■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 Dip2cE9PWR4 1557 aa27.31■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 RereQ80TZ9 1558 aa27.3■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 Nolc1E9Q5C9 702 aaKnown RBP27.3■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 AdgbG3UZ78 1657 aa27.27■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 Srcin1Q9QWI6 1250 aa27.27■■□□□ 1.96
Ctdsp1-201ENSMUST00000027367 Cul9Q80TT8 1865 aa27.26■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Kiaa0556Q8C753 1610 aa27.26■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Cep152A2AUM9 1736 aaKnown RBP27.26■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Os9Q8K2C7 672 aa27.25■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 PrxO55103 1391 aa27.24■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 AatkQ80YE4 1365 aa27.24■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Adgrb3Q80ZF8 1522 aa27.23■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Ehbp1l1Q99MS7 1716 aa27.23■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Pank3Q8R2W9 370 aa27.23■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Prdm2A2A7B5 1709 aaKnown RBP27.22■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Gm20521D3Z5F7 333 aa27.22■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Pola1P33609 1465 aa27.21■■□□□ 1.95
Ctdsp1-201ENSMUST00000027367 Rims1Q99NE5 1463 aa27.19■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Trpm1Q2TV84 1622 aa27.19■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Myo3aQ8K3H5 1613 aa27.19■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Yeats2Q3TUF7 1407 aa27.17■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Akap12Q9WTQ5 1684 aa27.17■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Inpp5dQ9ES52 1191 aa27.17■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Efcab6Q6P1E8 1516 aa27.16■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Srpk2O54781 681 aaKnown RBP27.15■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Eif5bQ05D44 1216 aaKnown RBP27.15■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Fan1Q69ZT1 1020 aa27.15■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Supt16hQ920B9 1047 aa27.15■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Sbno1Q689Z5 1390 aa27.15■■□□□ 1.94
Ctdsp1-201ENSMUST00000027367 Cdk5rap2Q8K389 1822 aa27.14■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Tecpr2Q3UH45 1423 aa27.14■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Rpgrip1lQ8CG73 1264 aa27.14■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Ino80Q6ZPV2 1559 aa27.13■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Itsn2Q9Z0R6 1659 aa27.12■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Tmf1B9EKI3 1091 aa27.12■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Anp32bQ9EST5 272 aaKnown RBP27.12■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Ppp1r18Q8BQ30 594 aa27.11■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Cfap65Q3V0B4 1847 aa27.11■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Myom2Q14BI5 1463 aa27.11■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Calr4Q3TQS0 420 aa27.11■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Zscan10Q3URR7 782 aa27.11■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Slc4a1apE9PX68 744 aa27.1■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Talpid3E9PV87 1520 aa27.1■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Usp40Q8BWR4 1235 aa27.09■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Gtf2e1Q9D0D5 440 aa27.09■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Ttc37F8VPK0 1563 aa27.09■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Fgd1P52734 960 aa27.08■■□□□ 1.93
Ctdsp1-201ENSMUST00000027367 Ofd1Q80Z25 1017 aa27.05■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Stard8Q8K031 1019 aa27.05■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Nphp4P59240 1425 aa27.05■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Gm16486A0A1D5RMD1 1434 aa27.04■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Q7TT23 1179 aa27.03■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Knl1Q66JQ7 1612 aa27.03■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Synj2Q9D2G5 1434 aa27.03■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Hecw2Q6I6G8 1578 aa27.02■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Fam184bQ0KK56 942 aa27.02■■□□□ 1.92
Ctdsp1-201ENSMUST00000027367 Adamts7Q68SA9 1657 aa27.01■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Sipa1l1Q8C0T5 1782 aa27.01■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Zscan21Q07231 555 aa27.01■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Puf60Q3UEB3 564 aaKnown RBP27.01■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Ttbk1Q6PCN3 1308 aa27■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 AU022751B1B0V2 589 aa27■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 P3h3Q8CG70 732 aa27■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 DnmbpQ6TXD4 1580 aa26.99■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Arid4bA2CG63 1314 aaKnown RBP26.98■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Upf2A2AT37 1269 aaKnown RBP26.98■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Uggt1Q6P5E4 1551 aa26.98■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Plxnc1Q9QZC2 1574 aa26.97■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Mroh1E0CZ22 1640 aa26.97■■□□□ 1.91
Ctdsp1-201ENSMUST00000027367 Skint5A7XUY5 1461 aa26.94■■□□□ 1.9
Ctdsp1-201ENSMUST00000027367 Zmym4A2A791 1549 aaKnown RBP26.94■■□□□ 1.9
Ctdsp1-201ENSMUST00000027367 Tex14Q7M6U3 1450 aa26.93■■□□□ 1.9
Ctdsp1-201ENSMUST00000027367 Gtf3c3Q3TMP1 882 aa26.93■■□□□ 1.9
Ctdsp1-201ENSMUST00000027367 Kdm5aQ3UXZ9 1690 aa26.92■■□□□ 1.9
Ctdsp1-201ENSMUST00000027367 Myom1Q62234 1667 aaKnown RBP26.89■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Ppp2r1aQ76MZ3 589 aa26.88■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Mak16Q8BGS0 296 aaKnown RBP26.87■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Lrrc7Q80TE7 1490 aa26.87■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 PalldQ9ET54 1408 aa26.86■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Ahdc1Q6PAL7 1594 aaKnown RBP26.85■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Rab3gap2Q8BMG7 1366 aa26.85■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Stag3O70576 1240 aa26.85■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Hfm1D3Z4R1 1434 aa26.84■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Pknox2Q8BG99 474 aa26.84■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Afap1Q80YS6 731 aa26.83■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Slc52a2Q9D8F3 450 aa26.83■■□□□ 1.89
Ctdsp1-201ENSMUST00000027367 Ift172Q6VH22 1749 aa26.82■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 L3mbtl2P59178 703 aa26.82■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Ccdc27Q3V036 639 aa26.81■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Ccdc9Q8VC31 543 aaKnown RBP26.81■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Prrc2bQ7TPM1 1486 aaKnown RBP26.81■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Kif7B7ZNG0 1348 aa26.81■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Qser1A2BIE1 1698 aa26.8■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Zfp444Q3TDV8 331 aaKnown RBP26.8■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Cnga1P29974 684 aa26.79■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 Dcaf11Q91VU6 549 aa26.79■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 IqubQ8CDK3 788 aa26.78■■□□□ 1.88
Ctdsp1-201ENSMUST00000027367 CltcQ68FD5 1675 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms