RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Ccdc173A0JLY1 547 aa20.53■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Ift140E9PY46 1464 aa20.53■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Sox12Q04890 314 aa20.52■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Mroh2bQ7M6Y6 1581 aa20.52■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Atp6v1dP57746 247 aa20.52■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Rpgrip1lQ8CG73 1264 aa20.52■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Utp3Q9JI13 469 aaKnown RBP20.52■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Ttll13A4Q9F6 804 aa20.51■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Isy1Q69ZQ2 285 aaKnown RBP20.51■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Kif4P33174 1231 aa20.51■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Utp14aQ640M1 767 aaKnown RBP20.51■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Smarce1O54941 411 aaKnown RBP20.5■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Fez1Q8K0X8 392 aa20.5■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Tiam1Q60610 1591 aa20.49■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Tnnt1O88346 262 aa20.49■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Prkrip1Q9CWV6 186 aaKnown RBP20.48■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Ftsj3Q9DBE9 838 aaKnown RBP20.48■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Soga1E1U8D0 1418 aa20.47■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Q3TQI7 289 aaKnown RBP20.47■□□□□ 0.87
Col17a1-201ENSMUST00000026045 R3hcc1Q8BSI6 488 aa20.47■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Frmpd1A2AKB4 1549 aa20.47■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Pibf1E9Q6K3 756 aa20.47■□□□□ 0.87
Col17a1-201ENSMUST00000026045 EzrP26040 586 aaKnown RBP20.46■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Dixdc1Q80Y83 711 aa20.46■□□□□ 0.87
Col17a1-201ENSMUST00000026045 CrebrfQ8CDG5 640 aaKnown RBP20.45■□□□□ 0.87
Col17a1-201ENSMUST00000026045 Zrsr2Q62377 462 aaKnown RBP20.45■□□□□ 0.86
Col17a1-201ENSMUST00000026045 PogzQ8BZH4 1409 aaKnown RBP20.45■□□□□ 0.86
Col17a1-201ENSMUST00000026045 BicraF8VPZ9 1578 aa20.45■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Slc4a2P13808 1237 aaKnown RBP20.44■□□□□ 0.86
Col17a1-201ENSMUST00000026045 GsdmaQ9EST1 446 aa20.44■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Urb2E9Q7L1 1524 aaKnown RBP20.44■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Gm7298A0A0N4SVU1 1476 aa20.44■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Trim55G3X8Y1 545 aa20.43■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Iffo2Q8R2V2 512 aa20.42■□□□□ 0.86
Col17a1-201ENSMUST00000026045 St18Q80TY4 1045 aa20.42■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Rnf214Q8BFU3 668 aaKnown RBP20.41■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Ccdc183A2AJB1 534 aa20.41■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Tpm3-rs7D3Z2H9 248 aa20.41■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Tpm3P21107 285 aaKnown RBP20.41■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Shq1Q7TMX5 569 aa20.41■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Cbx1P83917 185 aaKnown RBP20.4■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Ccdc60Q8C4J0 545 aa20.4■□□□□ 0.86
Col17a1-201ENSMUST00000026045 Mink1Q9JM52 1308 aa20.39■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Pde4cQ3UEI1 686 aa20.39■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Drc7Q6V3W6 876 aa20.39■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Arhgap31A6X8Z5 1425 aa20.39■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Def6Q8C2K1 630 aa20.39■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Sh3bp5Q9Z131 463 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Ttll5Q8CHB8 1328 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 ErbinQ80TH2 1402 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Znf526Q8BI66 675 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 PnisrA2AJT4 805 aaKnown RBP20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Ubap1lG3UW59 384 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Kif16bB1AVY7 1312 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Anapc15P60007 132 aa20.38■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Plcd3Q8K2J0 785 aa20.37■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Q7TT23 1179 aa20.37■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Cdkn1cP49919 348 aa20.37■□□□□ 0.85
Col17a1-201ENSMUST00000026045 BbxQ8VBW5 907 aa20.36■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Dhx9O70133 1380 aaKnown RBP20.35■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Nsd2Q8BVE8 1365 aa20.34■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Filip1lQ6P6L0 1131 aa20.34■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Sh3bgrQ9WUZ7 214 aa20.34■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Ccdc146E9Q9F7 977 aa20.33■□□□□ 0.85
Col17a1-201ENSMUST00000026045 Ccdc30Q8BVF4 654 aa20.33■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Zhx1P70121 873 aa20.32■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Tnpo1Q8BFY9 898 aaKnown RBP20.32■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Clstn1Q9EPL2 979 aa20.32■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Arid4aF8VPQ2 1261 aaKnown RBP20.31■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Rassf8Q8CJ96 419 aa20.31■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Cd109Q8R422 1442 aa20.31■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Hmgn5Q9JL35 406 aa20.31■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Camsap1A2AHC3 1581 aa20.31■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Map3k5O35099 1380 aa20.31■□□□□ 0.84
Col17a1-201ENSMUST00000026045 EprsQ8CGC7 1512 aaKnown RBP20.3■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Znhit6Q3UFB2 460 aaKnown RBP20.3■□□□□ 0.84
Col17a1-201ENSMUST00000026045 G3bp1P97855 465 aaKnown RBP20.3■□□□□ 0.84
Col17a1-201ENSMUST00000026045 KarsQ99MN1 595 aaKnown RBP20.3■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Mns1Q61884 491 aa20.3■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Stk31Q99MW1 1018 aa20.3■□□□□ 0.84
Col17a1-201ENSMUST00000026045 NcapgE9PWG6 1004 aa20.29■□□□□ 0.84
Col17a1-201ENSMUST00000026045 AppP12023 770 aa20.29■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Polr3gQ6NXY9 223 aa20.29■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Ssh1Q76I79 1042 aa20.29■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Rsph4aQ8BYM7 716 aa20.29■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Nap1l3Q794H2 544 aa20.29■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Tmem132aQ922P8 1018 aa20.28■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Arhgap5P97393 1501 aa20.28■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Prdm16A2A935 1275 aa20.28■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Myom3A2ABU4 1439 aa20.28■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Gps2Q921N8 327 aa20.27■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Pcf11G3X9Z4 1553 aa20.27■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Gse1Q3U3C9 1213 aa20.27■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Trim58Q5NCC9 485 aa20.27■□□□□ 0.84
Col17a1-201ENSMUST00000026045 Paf1Q8K2T8 535 aa20.27■□□□□ 0.83
Col17a1-201ENSMUST00000026045 CadpsQ80TJ1 1355 aa20.26■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Puf60Q3UEB3 564 aaKnown RBP20.26■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Cgnl1Q6AW69 1298 aa20.26■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Pde3bQ61409 1100 aa20.26■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Zfp444Q3TDV8 331 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms