RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ppp1r18Q8BQ30 594 aa13.34□□□□□ -0.27
Ciita-201ENSMUST00000023147 Mfap1aC0HKD8 439 aaKnown RBP13.33□□□□□ -0.27
Ciita-201ENSMUST00000023147 Mfap1bC0HKD9 439 aaKnown RBP13.33□□□□□ -0.27
Ciita-201ENSMUST00000023147 Atl3Q91YH5 541 aa13.33□□□□□ -0.27
Ciita-201ENSMUST00000023147 Sart1Q9Z315 806 aaKnown RBP13.33□□□□□ -0.27
Ciita-201ENSMUST00000023147 Rabep1O35551 862 aa13.33□□□□□ -0.28
Ciita-201ENSMUST00000023147 Tmco5bQ80X59 307 aa13.33□□□□□ -0.28
Ciita-201ENSMUST00000023147 Spag9Q58A65 1321 aaKnown RBP13.33□□□□□ -0.28
Ciita-201ENSMUST00000023147 Fam163aQ8CAA5 168 aa13.33□□□□□ -0.28
Ciita-201ENSMUST00000023147 Chmp3Q9CQ10 224 aa13.33□□□□□ -0.28
Ciita-201ENSMUST00000023147 Soga1E1U8D0 1418 aa13.33□□□□□ -0.28
Ciita-201ENSMUST00000023147 Mug1P28665 1476 aa13.32□□□□□ -0.28
Ciita-201ENSMUST00000023147 Abcc5Q9R1X5 1436 aa13.32□□□□□ -0.28
Ciita-201ENSMUST00000023147 Plcd4Q8K3R3 807 aa13.32□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ccer1Q9CQL2 403 aa13.31□□□□□ -0.28
Ciita-201ENSMUST00000023147 Kri1Q8VDQ9 704 aaKnown RBP13.31□□□□□ -0.28
Ciita-201ENSMUST00000023147 Pik3c2gO70167 1506 aa13.31□□□□□ -0.28
Ciita-201ENSMUST00000023147 Eif2s2Q99L45 331 aaKnown RBP13.31□□□□□ -0.28
Ciita-201ENSMUST00000023147 Esx1O88933 382 aa13.31□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ccdc47Q9D024 483 aaKnown RBP13.3□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ipo7Q9EPL8 1038 aaKnown RBP13.3□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ccdc183A2AJB1 534 aa13.3□□□□□ -0.28
Ciita-201ENSMUST00000023147 Odf2A3KGV1 830 aaKnown RBP13.3□□□□□ -0.28
Ciita-201ENSMUST00000023147 Tpm1P58771 284 aa13.3□□□□□ -0.28
Ciita-201ENSMUST00000023147 U2af1Q9D883 239 aaKnown RBP13.29□□□□□ -0.28
Ciita-201ENSMUST00000023147 Plb1Q3TTY0 1478 aa13.29□□□□□ -0.28
Ciita-201ENSMUST00000023147 Arhgap31A6X8Z5 1425 aa13.29□□□□□ -0.28
Ciita-201ENSMUST00000023147 Lmo7E9PYF4 1699 aaKnown RBP13.29□□□□□ -0.28
Ciita-201ENSMUST00000023147 Rrp9Q91WM3 475 aaKnown RBP13.29□□□□□ -0.28
Ciita-201ENSMUST00000023147 Gm21969J3QJZ1 289 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Trim30aP15533 496 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Cgnl1Q6AW69 1298 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Brpf1B2RRD7 1212 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ttll5Q8CHB8 1328 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Tpm2P58774 284 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 L3mbtl2P59178 703 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ccdc30Q8BVF4 654 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Kank1E9Q238 1360 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 VgfQ0VGU4 617 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 Ksr2Q3UVC0 959 aa13.28□□□□□ -0.28
Ciita-201ENSMUST00000023147 BccipQ9CWI3 316 aa13.27□□□□□ -0.28
Ciita-201ENSMUST00000023147 Nsd2Q8BVE8 1365 aa13.27□□□□□ -0.28
Ciita-201ENSMUST00000023147 Tpm4Q6IRU2 248 aa13.27□□□□□ -0.28
Ciita-201ENSMUST00000023147 Plin1Q8CGN5 517 aa13.27□□□□□ -0.28
Ciita-201ENSMUST00000023147 Gpatch8A2A6A1 1505 aa13.27□□□□□ -0.29
Ciita-201ENSMUST00000023147 Tpd52l1O54818 204 aa13.27□□□□□ -0.29
Ciita-201ENSMUST00000023147 Kif3bQ61771 747 aa13.27□□□□□ -0.29
Ciita-201ENSMUST00000023147 Rab3gap2Q8BMG7 1366 aa13.27□□□□□ -0.29
Ciita-201ENSMUST00000023147 Liat1Q810M6 228 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ppm1fQ8CGA0 452 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Gtf2a1Q99PM3 378 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Phf14Q9D4H9 881 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Kif7B7ZNG0 1348 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Dhx9O70133 1380 aaKnown RBP13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ciz1Q8VEH2 845 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Cluap1Q8R3P7 413 aa13.26□□□□□ -0.29
Ciita-201ENSMUST00000023147 Asxl1P59598 1514 aa13.25□□□□□ -0.29
Ciita-201ENSMUST00000023147 Cplx2P84086 134 aa13.25□□□□□ -0.29
Ciita-201ENSMUST00000023147 Tnnt1O88346 262 aa13.25□□□□□ -0.29
Ciita-201ENSMUST00000023147 Lmtk2Q3TYD6 1471 aa13.25□□□□□ -0.29
Ciita-201ENSMUST00000023147 Prdm16A2A935 1275 aa13.25□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ush1cQ9ES64 910 aa13.24□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ccdc141E9Q8Q6 1531 aa13.24□□□□□ -0.29
Ciita-201ENSMUST00000023147 Grin2aP35436 1464 aa13.24□□□□□ -0.29
Ciita-201ENSMUST00000023147 Glipr1l2Q9CQ35 332 aa13.24□□□□□ -0.29
Ciita-201ENSMUST00000023147 Krt82Q99M74 516 aa13.24□□□□□ -0.29
Ciita-201ENSMUST00000023147 Birc3O08863 600 aa13.24□□□□□ -0.29
Ciita-201ENSMUST00000023147 Pabpn1Q8CCS6 302 aaKnown RBP13.23□□□□□ -0.29
Ciita-201ENSMUST00000023147 GsdmaQ9EST1 446 aa13.23□□□□□ -0.29
Ciita-201ENSMUST00000023147 SlkO54988 1233 aa13.22□□□□□ -0.29
Ciita-201ENSMUST00000023147 Fgd6Q69ZL1 1399 aa13.22□□□□□ -0.29
Ciita-201ENSMUST00000023147 Q7TT23 1179 aa13.22□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ppp2r3aB2RXC8 1150 aa13.22□□□□□ -0.29
Ciita-201ENSMUST00000023147 Evc2Q8K1G2 1220 aa13.22□□□□□ -0.29
Ciita-201ENSMUST00000023147 Mical1Q8VDP3 1048 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Mlh3A0A1Y7VMP7 1443 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Caskin1Q6P9K8 1431 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Cd109Q8R422 1442 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 A0A1L1SQF0 893 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ppp2r1aQ76MZ3 589 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Stk26Q99JT2 416 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Kif20aP97329 887 aa13.21□□□□□ -0.29
Ciita-201ENSMUST00000023147 Ddx11Q6AXC6 880 aa13.21□□□□□ -0.3
Ciita-201ENSMUST00000023147 Smc4Q8CG47 1286 aa13.21□□□□□ -0.3
Ciita-201ENSMUST00000023147 Gpatch11Q3UFS4 262 aa13.2□□□□□ -0.3
Ciita-201ENSMUST00000023147 CenpjQ569L8 1344 aa13.2□□□□□ -0.3
Ciita-201ENSMUST00000023147 Polr3aB2RXC6 1390 aa13.2□□□□□ -0.3
Ciita-201ENSMUST00000023147 Rsph4aQ8BYM7 716 aa13.2□□□□□ -0.3
Ciita-201ENSMUST00000023147 Arhgef12Q8R4H2 1543 aaKnown RBP13.2□□□□□ -0.3
Ciita-201ENSMUST00000023147 Taok2Q6ZQ29 1240 aa13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Sf3a1Q8K4Z5 791 aaKnown RBP13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Kcnh8P59111 1102 aa13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Thoc2B1AZI6 1594 aaKnown RBP13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Magi1Q6RHR9 1471 aa13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Tomm22Q9CPQ3 142 aa13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Psme1P97371 249 aa13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 BC005561E9Q5E2 1589 aa13.19□□□□□ -0.3
Ciita-201ENSMUST00000023147 Casq1O09165 405 aa13.18□□□□□ -0.3
Ciita-201ENSMUST00000023147 GorabQ8BRM2 368 aa13.18□□□□□ -0.3
Ciita-201ENSMUST00000023147 Ccdc34Q3UI66 367 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms