RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Nup160Q9Z0W3 1402 aaKnown RBP13.82□□□□□ -0.2
Msh3-201ENSMUST00000022220 Eif4g1Q6NZJ6 1600 aaKnown RBP13.82□□□□□ -0.2
Msh3-201ENSMUST00000022220 Kdm5bQ80Y84 1544 aa13.82□□□□□ -0.2
Msh3-201ENSMUST00000022220 Prkrip1Q9CWV6 186 aaKnown RBP13.82□□□□□ -0.2
Msh3-201ENSMUST00000022220 Mlh3A0A1Y7VMP7 1443 aa13.81□□□□□ -0.2
Msh3-201ENSMUST00000022220 NudcO35685 332 aaKnown RBP13.81□□□□□ -0.2
Msh3-201ENSMUST00000022220 Vsig10D3YX43 558 aa13.81□□□□□ -0.2
Msh3-201ENSMUST00000022220 Apaf1O88879 1249 aa13.8□□□□□ -0.2
Msh3-201ENSMUST00000022220 Ppp2r1aQ76MZ3 589 aa13.8□□□□□ -0.2
Msh3-201ENSMUST00000022220 Eif2s2Q99L45 331 aaKnown RBP13.8□□□□□ -0.2
Msh3-201ENSMUST00000022220 Adgrb2Q8CGM1 1561 aa13.8□□□□□ -0.2
Msh3-201ENSMUST00000022220 Zranb1Q7M760 708 aa13.79□□□□□ -0.2
Msh3-201ENSMUST00000022220 Fancd2Q80V62 1450 aa13.79□□□□□ -0.2
Msh3-201ENSMUST00000022220 Trim44Q9QXA7 346 aa13.78□□□□□ -0.2
Msh3-201ENSMUST00000022220 Gsto1O09131 240 aa13.78□□□□□ -0.2
Msh3-201ENSMUST00000022220 Rapgef6Q5NCJ1 1609 aa13.77□□□□□ -0.2
Msh3-201ENSMUST00000022220 Zfp444Q3TDV8 331 aaKnown RBP13.77□□□□□ -0.2
Msh3-201ENSMUST00000022220 Rprd2Q6NXI6 1469 aaKnown RBP13.77□□□□□ -0.21
Msh3-201ENSMUST00000022220 Rtf1A2AQ19 715 aaKnown RBP13.77□□□□□ -0.21
Msh3-201ENSMUST00000022220 Rsph4aQ8BYM7 716 aa13.77□□□□□ -0.21
Msh3-201ENSMUST00000022220 PrxO55103 1391 aa13.77□□□□□ -0.21
Msh3-201ENSMUST00000022220 Unc13aQ4KUS2 1712 aa13.76□□□□□ -0.21
Msh3-201ENSMUST00000022220 Plekhg5Q66T02 1073 aa13.76□□□□□ -0.21
Msh3-201ENSMUST00000022220 Mbd3Q9Z2D8 285 aaKnown RBP13.76□□□□□ -0.21
Msh3-201ENSMUST00000022220 Ap3b2Q9JME5 1082 aa13.76□□□□□ -0.21
Msh3-201ENSMUST00000022220 Ipo8Q7TMY7 1010 aa13.76□□□□□ -0.21
Msh3-201ENSMUST00000022220 DekQ7TNV0 380 aaKnown RBP13.75□□□□□ -0.21
Msh3-201ENSMUST00000022220 Rfx7F8VPJ6 1459 aa13.75□□□□□ -0.21
Msh3-201ENSMUST00000022220 Ccdc30Q8BVF4 654 aa13.75□□□□□ -0.21
Msh3-201ENSMUST00000022220 Gm21190A0A0G2JGJ6 266 aa13.74□□□□□ -0.21
Msh3-201ENSMUST00000022220 Plcb2A3KGF7 1181 aa13.74□□□□□ -0.21
Msh3-201ENSMUST00000022220 Gtf2a1Q99PM3 378 aa13.74□□□□□ -0.21
Msh3-201ENSMUST00000022220 Pip4k2bQ80XI4 416 aa13.73□□□□□ -0.21
Msh3-201ENSMUST00000022220 Ccdc60Q8C4J0 545 aa13.73□□□□□ -0.21
Msh3-201ENSMUST00000022220 HnrnpmQ9D0E1 729 aaKnown RBP13.73□□□□□ -0.21
Msh3-201ENSMUST00000022220 Caskin1Q6P9K8 1431 aa13.73□□□□□ -0.21
Msh3-201ENSMUST00000022220 Q3TQI7 289 aaKnown RBP13.73□□□□□ -0.21
Msh3-201ENSMUST00000022220 Atp7aQ64430 1491 aa13.72□□□□□ -0.21
Msh3-201ENSMUST00000022220 Nectin2P32507 530 aa13.71□□□□□ -0.21
Msh3-201ENSMUST00000022220 Cdk19Q8BWD8 501 aa13.71□□□□□ -0.21
Msh3-201ENSMUST00000022220 Abcc1O35379 1528 aa13.71□□□□□ -0.22
Msh3-201ENSMUST00000022220 Ssh2Q5SW75 1423 aa13.71□□□□□ -0.22
Msh3-201ENSMUST00000022220 Ak7Q9D2H2 614 aa13.71□□□□□ -0.22
Msh3-201ENSMUST00000022220 Erich3F6QRE9 1637 aa13.7□□□□□ -0.22
Msh3-201ENSMUST00000022220 Pank1Q8K4K6 548 aa13.7□□□□□ -0.22
Msh3-201ENSMUST00000022220 Mapkbp1Q6NS57 1503 aa13.7□□□□□ -0.22
Msh3-201ENSMUST00000022220 Ncoa1P70365 1447 aa13.7□□□□□ -0.22
Msh3-201ENSMUST00000022220 Nutm1Q8BHP2 1126 aa13.69□□□□□ -0.22
Msh3-201ENSMUST00000022220 Ccar1Q8CH18 1146 aaKnown RBP13.69□□□□□ -0.22
Msh3-201ENSMUST00000022220 Rrp9Q91WM3 475 aaKnown RBP13.69□□□□□ -0.22
Msh3-201ENSMUST00000022220 Stk31Q99MW1 1018 aa13.68□□□□□ -0.22
Msh3-201ENSMUST00000022220 Lmo7E9PYF4 1699 aaKnown RBP13.68□□□□□ -0.22
Msh3-201ENSMUST00000022220 Cc2d1aQ8K1A6 943 aa13.68□□□□□ -0.22
Msh3-201ENSMUST00000022220 Adcy10Q8C0T9 1614 aa13.67□□□□□ -0.22
Msh3-201ENSMUST00000022220 Pik3c2gO70167 1506 aa13.67□□□□□ -0.22
Msh3-201ENSMUST00000022220 Kif16bB1AVY7 1312 aa13.67□□□□□ -0.22
Msh3-201ENSMUST00000022220 Lmtk2Q3TYD6 1471 aa13.66□□□□□ -0.22
Msh3-201ENSMUST00000022220 Ythdc1E9Q5K9 736 aaKnown RBP13.66□□□□□ -0.22
Msh3-201ENSMUST00000022220 IbspQ61711 324 aa13.66□□□□□ -0.22
Msh3-201ENSMUST00000022220 AI481877A2ALV5 1481 aa13.66□□□□□ -0.22
Msh3-201ENSMUST00000022220 OvosQ3UU35 1456 aa13.65□□□□□ -0.22
Msh3-201ENSMUST00000022220 Polr3aB2RXC6 1390 aa13.65□□□□□ -0.22
Msh3-201ENSMUST00000022220 Ralbp1Q62172 648 aa13.65□□□□□ -0.22
Msh3-201ENSMUST00000022220 Arhgef12Q8R4H2 1543 aaKnown RBP13.65□□□□□ -0.22
Msh3-201ENSMUST00000022220 Nkx1-2P42580 305 aa13.65□□□□□ -0.22
Msh3-201ENSMUST00000022220 Rab3gap2Q8BMG7 1366 aa13.65□□□□□ -0.23
Msh3-201ENSMUST00000022220 Wdr7Q920I9 1489 aa13.64□□□□□ -0.23
Msh3-201ENSMUST00000022220 AampJ3QN89 436 aa13.64□□□□□ -0.23
Msh3-201ENSMUST00000022220 Gapvd1Q6PAR5 1458 aa13.64□□□□□ -0.23
Msh3-201ENSMUST00000022220 Lmod3E9QA62 571 aa13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 Ggt6Q6PDE7 497 aa13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 MpripP97434 1024 aa13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 G3bp1P97855 465 aaKnown RBP13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 Rrp12Q6P5B0 1295 aaKnown RBP13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 DmtnQ9WV69 405 aa13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 Camsap2Q8C1B1 1461 aa13.63□□□□□ -0.23
Msh3-201ENSMUST00000022220 Lrriq1Q0P5X1 1673 aa13.62□□□□□ -0.23
Msh3-201ENSMUST00000022220 SlkO54988 1233 aa13.62□□□□□ -0.23
Msh3-201ENSMUST00000022220 GorabQ8BRM2 368 aa13.62□□□□□ -0.23
Msh3-201ENSMUST00000022220 Atxn3Q9CVD2 355 aa13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Adamts12Q811B3 1600 aa13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Mfap1aC0HKD8 439 aaKnown RBP13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Mfap1bC0HKD9 439 aaKnown RBP13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Evi5lH3BKQ3 813 aa13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Kank1E9Q238 1360 aa13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Asxl2Q8BZ32 1370 aa13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Asxl1P59598 1514 aa13.6□□□□□ -0.23
Msh3-201ENSMUST00000022220 Fyb1O35601 819 aa13.59□□□□□ -0.23
Msh3-201ENSMUST00000022220 Usp16Q99LG0 825 aa13.59□□□□□ -0.23
Msh3-201ENSMUST00000022220 Abca5Q8K448 1642 aa13.59□□□□□ -0.23
Msh3-201ENSMUST00000022220 Kdm3bQ6ZPY7 1562 aa13.59□□□□□ -0.23
Msh3-201ENSMUST00000022220 Dusp27Q148W8 1138 aa13.59□□□□□ -0.23
Msh3-201ENSMUST00000022220 Ylpm1Q9R0I7 1386 aaKnown RBP13.59□□□□□ -0.23
Msh3-201ENSMUST00000022220 Cald1E9QA15 768 aaKnown RBP13.58□□□□□ -0.23
Msh3-201ENSMUST00000022220 Paxip1Q6NZQ4 1056 aa13.58□□□□□ -0.23
Msh3-201ENSMUST00000022220 Rusc2Q80U22 1514 aa13.58□□□□□ -0.24
Msh3-201ENSMUST00000022220 Ccdc183A2AJB1 534 aa13.58□□□□□ -0.24
Msh3-201ENSMUST00000022220 Hsp90b1P08113 802 aaKnown RBP13.58□□□□□ -0.24
Msh3-201ENSMUST00000022220 Erbb3Q61526 1339 aa13.58□□□□□ -0.24
Msh3-201ENSMUST00000022220 FanciQ8K368 1330 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 200.5 ms