RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Cabp4Q8VHC5 271 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Ftsj3Q9DBE9 838 aaKnown RBP10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Fancd2Q80V62 1450 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Adgrl3Q80TS3 1537 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Ubap1lG3UW59 384 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 A0A1L1SQF0 893 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Dcaf11Q91VU6 549 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Rusc2Q80U22 1514 aa10.19□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Evc2Q8K1G2 1220 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Cd109Q8R422 1442 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Prm3Q62100 101 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Cgnl1Q6AW69 1298 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Usp47Q8BY87 1376 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Arap1Q4LDD4 1452 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Cspp1B2RX88 1205 aa10.18□□□□□ -0.78
Ssr1-201ENSMUST00000021864 CrebrfQ8CDG5 640 aaKnown RBP10.17□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Nup160Q9Z0W3 1402 aaKnown RBP10.17□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Il16O54824 1322 aa10.16□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Krt82Q99M74 516 aa10.16□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Pla2r1Q62028 1487 aa10.16□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Ipo8Q7TMY7 1010 aa10.16□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Mlh3A0A1Y7VMP7 1443 aa10.16□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Srek1Q8BZX4 494 aaKnown RBP10.16□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Caskin1Q6P9K8 1431 aa10.15□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Cplx2P84086 134 aa10.15□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Puf60Q3UEB3 564 aaKnown RBP10.15□□□□□ -0.79
Ssr1-201ENSMUST00000021864 UvssaQ9D479 717 aa10.15□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Gm21190A0A0G2JGJ6 266 aa10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Wdr7Q920I9 1489 aa10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Stk31Q99MW1 1018 aa10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Aebp2Q9Z248 504 aaKnown RBP10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 PxdnQ3UQ28 1475 aa10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Becn1O88597 448 aa10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Ksr2Q3UVC0 959 aa10.14□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Samd9lQ69Z37 1561 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Mfap1aC0HKD8 439 aaKnown RBP10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Mfap1bC0HKD9 439 aaKnown RBP10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Paf1Q8K2T8 535 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Atp2b2Q9R0K7 1198 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 AppP12023 770 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 TnnQ80Z71 1560 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Slc4a10Q5DTL9 1118 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Ipo7Q9EPL8 1038 aaKnown RBP10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 NexmifQ5DTT1 1515 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Sf3b2Q3UJB0 878 aaKnown RBP10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Znf330Q922H9 316 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Hook1Q8BIL5 728 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Ccdc43Q9CR29 222 aaKnown RBP10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 St18Q80TY4 1045 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Glipr1l2Q9CQ35 332 aa10.13□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Zfp644E9QA22 1323 aa10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Lrriq1Q0P5X1 1673 aa10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Irx3P81067 507 aa10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Chmp7Q8R1T1 451 aa10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Shroom2A2ALU4 1481 aa10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Dhx16G3X8X0 1044 aaKnown RBP10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Ylpm1Q9R0I7 1386 aaKnown RBP10.12□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Filip1lQ6P6L0 1131 aa10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 4933402E13RikQ9D4D2 429 aa10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Gpatch8A2A6A1 1505 aa10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Eif4g3Q80XI3 1579 aaKnown RBP10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Gsto1O09131 240 aa10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Kiaa0754Q69ZZ9 979 aa10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Ddx54Q8K4L0 874 aaKnown RBP10.11□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Zrsr2Q62377 462 aaKnown RBP10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Rsph3aQ3UFY4 516 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 GorabQ8BRM2 368 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Cluap1Q8R3P7 413 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Mical1Q8VDP3 1048 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Gabpb2P81069 414 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Vps8Q0P5W1 1427 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Pibf1E9Q6K3 756 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Dnajc5P60904 198 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 FanciQ8K368 1330 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Trim30aP15533 496 aa10.1□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Dmrt2Q8BG36 561 aa10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 PhaxQ9JJT9 385 aaKnown RBP10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Nap1l3Q794H2 544 aa10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Rrp12Q6P5B0 1295 aaKnown RBP10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Tiam1Q60610 1591 aa10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Supt16hQ920B9 1047 aa10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Ttll5Q8CHB8 1328 aa10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 Sf3a1Q8K4Z5 791 aaKnown RBP10.09□□□□□ -0.79
Ssr1-201ENSMUST00000021864 WizO88286 1684 aaKnown RBP10.08□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Mapkbp1Q6NS57 1503 aa10.08□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Tceal9Q9DD24 104 aa10.08□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Ppp4r3bQ922R5 820 aa10.08□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Chrna2Q91X60 512 aa10.08□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Ttc21bQ0HA38 1315 aa10.08□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Lrrcc1Q69ZB0 1026 aa10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Slc5a4bQ91ZP4 660 aa10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 HnrnpmQ9D0E1 729 aaKnown RBP10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Rnf20Q5DTM8 973 aa10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Sin3aQ60520 1274 aaKnown RBP10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Gsdma3Q5Y4Y6 464 aa10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 TatQ8QZR1 454 aa10.07□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Pcf11G3X9Z4 1553 aa10.06□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Tsen2Q6P7W5 460 aa10.06□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Ipo9Q91YE6 1041 aa10.06□□□□□ -0.8
Ssr1-201ENSMUST00000021864 Ccp110Q7TSH4 1004 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms