RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Sh3bp5Q9Z131 463 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Mapkbp1Q6NS57 1503 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Ncoa2Q61026 1462 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Prdm10Q3UTQ7 1184 aa11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Irx6Q9ER75 438 aa11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Ttc37F8VPK0 1563 aa11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Mfap1aC0HKD8 439 aaKnown RBP11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Mfap1bC0HKD9 439 aaKnown RBP11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Ssh1Q76I79 1042 aa11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Sox12Q04890 314 aa11.57□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Nectin2P32507 530 aa11.56□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Rfx1P48377 963 aa11.56□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Gtf3c6Q9D8P7 227 aa11.56□□□□□ -0.56
Ctc1-201ENSMUST00000021278 AdgbG3UZ78 1657 aa11.56□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Il4rP16382 810 aa11.55□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Mcm4P49717 862 aa11.55□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Rrbp1Q99PL5 1605 aaKnown RBP11.55□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Skap1Q3UUV5 355 aa11.55□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Cald1E9QA15 768 aaKnown RBP11.54□□□□□ -0.56
Ctc1-201ENSMUST00000021278 AppP12023 770 aa11.54□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Stac3Q8BZ71 360 aa11.54□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Eea1Q8BL66 1411 aa11.54□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Slc4a2P13808 1237 aaKnown RBP11.53□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Rnf214Q8BFU3 668 aaKnown RBP11.53□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Neurod2Q62414 383 aa11.53□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Magi1Q6RHR9 1471 aa11.52□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Fancd2Q80V62 1450 aa11.52□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Casc1Q6TDU8 730 aa11.52□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Ccdc94Q9D6J3 314 aa11.52□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Arhgef11Q68FM7 1552 aa11.51□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Tnpo1Q8BFY9 898 aaKnown RBP11.51□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Rwdd1Q9CQK7 243 aa11.51□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Gm973E9Q295 1059 aa11.5□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Map7O88735 730 aa11.5□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Taf3Q5HZG4 932 aa11.5□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Kif3aP28741 701 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Nkx1-2P42580 305 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Fez1Q8K0X8 392 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Mlh3A0A1Y7VMP7 1443 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Pcmtd1P59913 357 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Ecm2Q5FW85 670 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Prkrip1Q9CWV6 186 aaKnown RBP11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 CntlnA2AM05 1397 aa11.49□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Serpina10Q8R121 448 aa11.48□□□□□ -0.57
Ctc1-201ENSMUST00000021278 BlmO88700 1416 aa11.48□□□□□ -0.57
Ctc1-201ENSMUST00000021278 NcapgE9PWG6 1004 aa11.48□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Sh3bp1P55194 680 aa11.48□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Gtpbp4Q99ME9 634 aaKnown RBP11.48□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Prex2Q3LAC4 1598 aa11.47□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Dhx57Q6P5D3 1388 aaKnown RBP11.47□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Fam163aQ8CAA5 168 aa11.47□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Nlrp6Q91WS2 869 aa11.47□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Mbd3Q9Z2D8 285 aaKnown RBP11.47□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Gm13695A2AK44 830 aa11.47□□□□□ -0.57
Ctc1-201ENSMUST00000021278 L3mbtl2P59178 703 aa11.46□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Arap1Q4LDD4 1452 aa11.46□□□□□ -0.57
Ctc1-201ENSMUST00000021278 Rapgef6Q5NCJ1 1609 aa11.46□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ccdc183A2AJB1 534 aa11.46□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ca8P28651 291 aa11.46□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ankrd26Q811D2 1581 aa11.46□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Pip4k2bQ80XI4 416 aa11.46□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ripk4Q9ERK0 786 aa11.46□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ncoa3O09000 1398 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Fhad1A6PWD2 1420 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Slc4a1apE9PX68 744 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 MycnP03966 462 aaKnown RBP11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Zrsr2Q62377 462 aaKnown RBP11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Trerf1Q8BXJ2 1205 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Sart1Q9Z315 806 aaKnown RBP11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Tdrd9Q14BI7 1383 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 NhsB1AV60 1647 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 GorabQ8BRM2 368 aa11.45□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Mapk8ip3Q9ESN9 1337 aa11.44□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Rsph3aQ3UFY4 516 aa11.44□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Cluap1Q8R3P7 413 aa11.44□□□□□ -0.58
Ctc1-201ENSMUST00000021278 KarsQ99MN1 595 aaKnown RBP11.44□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Arhgap5P97393 1501 aa11.44□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Dmrt2Q8BG36 561 aa11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Dhx16G3X8X0 1044 aaKnown RBP11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 RdxP26043 583 aaKnown RBP11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Frmd3Q8BHD4 595 aa11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Mroh2aD3Z750 1679 aa11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Naip2Q9QUK4 1447 aa11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Mug1P28665 1476 aa11.43□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Tpd52l1O54818 204 aa11.42□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ercc6lQ8BHK9 1240 aa11.42□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Dnajc14Q921R4 703 aa11.42□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Afap1Q80YS6 731 aa11.42□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Mak16Q8BGS0 296 aaKnown RBP11.41□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Rnf17Q99MV7 1640 aa11.41□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Anp32eP97822 260 aaKnown RBP11.41□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Q4VA45 678 aa11.41□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Chic2Q9D9G3 165 aa11.41□□□□□ -0.58
Ctc1-201ENSMUST00000021278 AglF8VPN4 1532 aa11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Alpk3Q924C5 1678 aa11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 NmiO35309 314 aa11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Calcoco2A2A6M5 331 aa11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Trim55G3X8Y1 545 aa11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Mex3cQ05A36 652 aaKnown RBP11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Ncbp3Q8BZR9 615 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms