RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Atp7aQ64430 1491 aa14.71□□□□□ -0.06
Herc4-201ENSMUST00000020258 Polr3aB2RXC6 1390 aa14.71□□□□□ -0.06
Herc4-201ENSMUST00000020258 Kank1E9Q238 1360 aa14.71□□□□□ -0.06
Herc4-201ENSMUST00000020258 Zranb1Q7M760 708 aa14.7□□□□□ -0.06
Herc4-201ENSMUST00000020258 Plcd4Q8K3R3 807 aa14.7□□□□□ -0.06
Herc4-201ENSMUST00000020258 Tsen2Q6P7W5 460 aa14.7□□□□□ -0.06
Herc4-201ENSMUST00000020258 Mapk8ip3Q9ESN9 1337 aa14.69□□□□□ -0.06
Herc4-201ENSMUST00000020258 Ssh2Q5SW75 1423 aa14.68□□□□□ -0.06
Herc4-201ENSMUST00000020258 Birc3O08863 600 aa14.68□□□□□ -0.06
Herc4-201ENSMUST00000020258 Rab3gap2Q8BMG7 1366 aa14.68□□□□□ -0.06
Herc4-201ENSMUST00000020258 NgefQ8CHT1 710 aa14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Fam135aQ6NS59 1506 aa14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Kif14L0N7N1 1674 aaKnown RBP14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Plcb2A3KGF7 1181 aa14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Mink1Q9JM52 1308 aa14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Asxl1P59598 1514 aa14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Puf60Q3UEB3 564 aaKnown RBP14.67□□□□□ -0.06
Herc4-201ENSMUST00000020258 Gcc2Q8CHG3 1679 aa14.66□□□□□ -0.06
Herc4-201ENSMUST00000020258 RalgapbQ8BQZ4 1484 aa14.66□□□□□ -0.06
Herc4-201ENSMUST00000020258 GsdmaQ9EST1 446 aa14.66□□□□□ -0.06
Herc4-201ENSMUST00000020258 Nectin2P32507 530 aa14.66□□□□□ -0.06
Herc4-201ENSMUST00000020258 U2surpQ6NV83 1029 aaKnown RBP14.65□□□□□ -0.06
Herc4-201ENSMUST00000020258 Cul7Q8VE73 1689 aa14.65□□□□□ -0.06
Herc4-201ENSMUST00000020258 GorabQ8BRM2 368 aa14.65□□□□□ -0.06
Herc4-201ENSMUST00000020258 Plekhh1Q80TI1 1356 aa14.64□□□□□ -0.07
Herc4-201ENSMUST00000020258 Pibf1E9Q6K3 756 aa14.63□□□□□ -0.07
Herc4-201ENSMUST00000020258 Ccdc183A2AJB1 534 aa14.62□□□□□ -0.07
Herc4-201ENSMUST00000020258 ErbinQ80TH2 1402 aa14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Ccdc9Q8VC31 543 aaKnown RBP14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Arhgef12Q8R4H2 1543 aaKnown RBP14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Adamts12Q811B3 1600 aa14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Ccdc60Q8C4J0 545 aa14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Mlh3A0A1Y7VMP7 1443 aa14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Supt6hQ62383 1726 aaKnown RBP14.61□□□□□ -0.07
Herc4-201ENSMUST00000020258 Arhgef11Q68FM7 1552 aa14.59□□□□□ -0.07
Herc4-201ENSMUST00000020258 Ralbp1Q62172 648 aa14.58□□□□□ -0.07
Herc4-201ENSMUST00000020258 Shq1Q7TMX5 569 aa14.58□□□□□ -0.07
Herc4-201ENSMUST00000020258 Dnttip2Q8R2M2 758 aaKnown RBP14.58□□□□□ -0.08
Herc4-201ENSMUST00000020258 Gm14025A2AP89 1413 aa14.58□□□□□ -0.08
Herc4-201ENSMUST00000020258 Fgd6Q69ZL1 1399 aa14.57□□□□□ -0.08
Herc4-201ENSMUST00000020258 Trim58Q5NCC9 485 aa14.57□□□□□ -0.08
Herc4-201ENSMUST00000020258 Prdm16A2A935 1275 aa14.57□□□□□ -0.08
Herc4-201ENSMUST00000020258 Rfx1P48377 963 aa14.57□□□□□ -0.08
Herc4-201ENSMUST00000020258 Utp14aQ640M1 767 aaKnown RBP14.57□□□□□ -0.08
Herc4-201ENSMUST00000020258 Nsd2Q8BVE8 1365 aa14.57□□□□□ -0.08
Herc4-201ENSMUST00000020258 Stk11ipQ3TAA7 1072 aa14.56□□□□□ -0.08
Herc4-201ENSMUST00000020258 Htatsf1Q8BGC0 757 aa14.56□□□□□ -0.08
Herc4-201ENSMUST00000020258 Zmym4A2A791 1549 aaKnown RBP14.56□□□□□ -0.08
Herc4-201ENSMUST00000020258 Nup160Q9Z0W3 1402 aaKnown RBP14.56□□□□□ -0.08
Herc4-201ENSMUST00000020258 Tnpo1Q8BFY9 898 aaKnown RBP14.55□□□□□ -0.08
Herc4-201ENSMUST00000020258 Fgd1P52734 960 aa14.55□□□□□ -0.08
Herc4-201ENSMUST00000020258 Mre11Q61216 706 aa14.55□□□□□ -0.08
Herc4-201ENSMUST00000020258 Ccar1Q8CH18 1146 aaKnown RBP14.55□□□□□ -0.08
Herc4-201ENSMUST00000020258 Smc5Q8CG46 1101 aaKnown RBP14.54□□□□□ -0.08
Herc4-201ENSMUST00000020258 Abca16E9PWJ7 1678 aa14.54□□□□□ -0.08
Herc4-201ENSMUST00000020258 Caskin1Q6P9K8 1431 aa14.53□□□□□ -0.08
Herc4-201ENSMUST00000020258 Cpsf1Q9EPU4 1441 aaKnown RBP14.53□□□□□ -0.08
Herc4-201ENSMUST00000020258 Dusp27Q148W8 1138 aa14.52□□□□□ -0.08
Herc4-201ENSMUST00000020258 Q9D9H8 365 aa14.52□□□□□ -0.08
Herc4-201ENSMUST00000020258 Map3k4O08648 1597 aa14.52□□□□□ -0.09
Herc4-201ENSMUST00000020258 Nkx1-2P42580 305 aa14.52□□□□□ -0.09
Herc4-201ENSMUST00000020258 Ttc21bQ0HA38 1315 aa14.52□□□□□ -0.09
Herc4-201ENSMUST00000020258 Aplp1Q03157 653 aa14.51□□□□□ -0.09
Herc4-201ENSMUST00000020258 Ppp1r3fQ9JIG4 799 aa14.51□□□□□ -0.09
Herc4-201ENSMUST00000020258 Fancd2Q80V62 1450 aa14.51□□□□□ -0.09
Herc4-201ENSMUST00000020258 Fhod3Q76LL6 1578 aa14.51□□□□□ -0.09
Herc4-201ENSMUST00000020258 Ccdc146E9Q9F7 977 aa14.5□□□□□ -0.09
Herc4-201ENSMUST00000020258 Pnmal2G3X9N3 661 aa14.5□□□□□ -0.09
Herc4-201ENSMUST00000020258 Setbp1Q9Z180 1582 aa14.5□□□□□ -0.09
Herc4-201ENSMUST00000020258 Chmp4cQ9D7F7 232 aa14.5□□□□□ -0.09
Herc4-201ENSMUST00000020258 Q4VA45 678 aa14.49□□□□□ -0.09
Herc4-201ENSMUST00000020258 Cc2d1aQ8K1A6 943 aa14.49□□□□□ -0.09
Herc4-201ENSMUST00000020258 Mapkbp1Q6NS57 1503 aa14.49□□□□□ -0.09
Herc4-201ENSMUST00000020258 Mbd5B1AYB6 1498 aa14.48□□□□□ -0.09
Herc4-201ENSMUST00000020258 PtprgQ05909 1442 aa14.48□□□□□ -0.09
Herc4-201ENSMUST00000020258 Duxf3A0A0N4SV92 674 aa14.48□□□□□ -0.09
Herc4-201ENSMUST00000020258 Rlbp1Q9Z275 317 aa14.48□□□□□ -0.09
Herc4-201ENSMUST00000020258 G3bp1P97855 465 aaKnown RBP14.47□□□□□ -0.09
Herc4-201ENSMUST00000020258 CenpjQ569L8 1344 aa14.47□□□□□ -0.09
Herc4-201ENSMUST00000020258 Sox12Q04890 314 aa14.47□□□□□ -0.09
Herc4-201ENSMUST00000020258 Rbm25B2RY56 838 aaKnown RBP14.46□□□□□ -0.09
Herc4-201ENSMUST00000020258 Znf692Q3U381 531 aa14.46□□□□□ -0.09
Herc4-201ENSMUST00000020258 Atp10dQ8K2X1 1416 aa14.46□□□□□ -0.09
Herc4-201ENSMUST00000020258 Tarbp1E9Q368 1579 aa14.46□□□□□ -0.09
Herc4-201ENSMUST00000020258 Cald1E9QA15 768 aaKnown RBP14.46□□□□□ -0.1
Herc4-201ENSMUST00000020258 Map7O88735 730 aa14.46□□□□□ -0.1
Herc4-201ENSMUST00000020258 Abcc2Q8VI47 1543 aa14.46□□□□□ -0.1
Herc4-201ENSMUST00000020258 Ylpm1Q9R0I7 1386 aaKnown RBP14.46□□□□□ -0.1
Herc4-201ENSMUST00000020258 Uspl1Q3ULM6 1089 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 AI481877A2ALV5 1481 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 Kiaa1551Q5DTW7 1521 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 Lrrc9Q8CDN9 1456 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 SlkO54988 1233 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 Kdm2bQ6P1G2 1309 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 Ythdc1E9Q5K9 736 aaKnown RBP14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 Stard8Q8K031 1019 aa14.45□□□□□ -0.1
Herc4-201ENSMUST00000020258 Ppp2r3aB2RXC8 1150 aa14.44□□□□□ -0.1
Herc4-201ENSMUST00000020258 Tnnt1O88346 262 aa14.44□□□□□ -0.1
Herc4-201ENSMUST00000020258 Atp2b2Q9R0K7 1198 aa14.44□□□□□ -0.1
Herc4-201ENSMUST00000020258 Mroh2aD3Z750 1679 aa14.44□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms