RNA–Protein interactions for RNA: ENSMUST00000012580.12

Hps3-201, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hps3, Length 4,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-201ENSMUST00000012580 Trappc8E9PWG2 1437 aa15.99■□□□□ 0.15
Hps3-201ENSMUST00000012580 Kdm3bQ6ZPY7 1562 aa15.99■□□□□ 0.15
Hps3-201ENSMUST00000012580 Rab3gap2Q8BMG7 1366 aa15.99■□□□□ 0.15
Hps3-201ENSMUST00000012580 Rapgef6Q5NCJ1 1609 aa15.99■□□□□ 0.15
Hps3-201ENSMUST00000012580 Birc3O08863 600 aa15.98■□□□□ 0.15
Hps3-201ENSMUST00000012580 GsdmaQ9EST1 446 aa15.98■□□□□ 0.15
Hps3-201ENSMUST00000012580 Naip6Q9JIB6 1403 aa15.98■□□□□ 0.15
Hps3-201ENSMUST00000012580 Nutm1Q8BHP2 1126 aa15.97■□□□□ 0.15
Hps3-201ENSMUST00000012580 AlkP97793 1621 aa15.97■□□□□ 0.15
Hps3-201ENSMUST00000012580 NgefQ8CHT1 710 aa15.97■□□□□ 0.15
Hps3-201ENSMUST00000012580 Shroom2A2ALU4 1481 aa15.97■□□□□ 0.15
Hps3-201ENSMUST00000012580 Pprc1Q6NZN1 1644 aa15.97■□□□□ 0.15
Hps3-201ENSMUST00000012580 Asxl1P59598 1514 aa15.96■□□□□ 0.15
Hps3-201ENSMUST00000012580 Plekhh1Q80TI1 1356 aa15.96■□□□□ 0.15
Hps3-201ENSMUST00000012580 U2surpQ6NV83 1029 aaKnown RBP15.96■□□□□ 0.15
Hps3-201ENSMUST00000012580 Atp7aQ64430 1491 aa15.96■□□□□ 0.15
Hps3-201ENSMUST00000012580 Puf60Q3UEB3 564 aaKnown RBP15.96■□□□□ 0.15
Hps3-201ENSMUST00000012580 Htatsf1Q8BGC0 757 aa15.96■□□□□ 0.15
Hps3-201ENSMUST00000012580 GorabQ8BRM2 368 aa15.96■□□□□ 0.14
Hps3-201ENSMUST00000012580 Ipo4Q8VI75 1082 aa15.96■□□□□ 0.14
Hps3-201ENSMUST00000012580 Mink1Q9JM52 1308 aa15.95■□□□□ 0.14
Hps3-201ENSMUST00000012580 Abca5Q8K448 1642 aa15.94■□□□□ 0.14
Hps3-201ENSMUST00000012580 Gas2l2Q5SSG4 860 aa15.94■□□□□ 0.14
Hps3-201ENSMUST00000012580 Ccdc183A2AJB1 534 aa15.94■□□□□ 0.14
Hps3-201ENSMUST00000012580 Nectin2P32507 530 aa15.93■□□□□ 0.14
Hps3-201ENSMUST00000012580 SphkapQ6NSW3 1687 aa15.93■□□□□ 0.14
Hps3-201ENSMUST00000012580 RalgapbQ8BQZ4 1484 aa15.93■□□□□ 0.14
Hps3-201ENSMUST00000012580 Dnttip2Q8R2M2 758 aaKnown RBP15.92■□□□□ 0.14
Hps3-201ENSMUST00000012580 ErbinQ80TH2 1402 aa15.92■□□□□ 0.14
Hps3-201ENSMUST00000012580 Ralbp1Q62172 648 aa15.92■□□□□ 0.14
Hps3-201ENSMUST00000012580 Ssh2Q5SW75 1423 aa15.92■□□□□ 0.14
Hps3-201ENSMUST00000012580 Ccdc60Q8C4J0 545 aa15.92■□□□□ 0.14
Hps3-201ENSMUST00000012580 Pibf1E9Q6K3 756 aa15.91■□□□□ 0.14
Hps3-201ENSMUST00000012580 Zranb1Q7M760 708 aa15.91■□□□□ 0.14
Hps3-201ENSMUST00000012580 Gcc2Q8CHG3 1679 aa15.9■□□□□ 0.14
Hps3-201ENSMUST00000012580 Trim58Q5NCC9 485 aa15.9■□□□□ 0.14
Hps3-201ENSMUST00000012580 Fam135aQ6NS59 1506 aa15.9■□□□□ 0.14
Hps3-201ENSMUST00000012580 Mre11Q61216 706 aa15.9■□□□□ 0.14
Hps3-201ENSMUST00000012580 Mlh3A0A1Y7VMP7 1443 aa15.89■□□□□ 0.14
Hps3-201ENSMUST00000012580 Prdm16A2A935 1275 aa15.89■□□□□ 0.13
Hps3-201ENSMUST00000012580 Ccar1Q8CH18 1146 aaKnown RBP15.89■□□□□ 0.13
Hps3-201ENSMUST00000012580 Arhgef12Q8R4H2 1543 aaKnown RBP15.89■□□□□ 0.13
Hps3-201ENSMUST00000012580 Nsd2Q8BVE8 1365 aa15.89■□□□□ 0.13
Hps3-201ENSMUST00000012580 Cul7Q8VE73 1689 aa15.88■□□□□ 0.13
Hps3-201ENSMUST00000012580 Shq1Q7TMX5 569 aa15.87■□□□□ 0.13
Hps3-201ENSMUST00000012580 Kif14L0N7N1 1674 aaKnown RBP15.87■□□□□ 0.13
Hps3-201ENSMUST00000012580 Rfx1P48377 963 aa15.86■□□□□ 0.13
Hps3-201ENSMUST00000012580 Znf692Q3U381 531 aa15.86■□□□□ 0.13
Hps3-201ENSMUST00000012580 Utp14aQ640M1 767 aaKnown RBP15.86■□□□□ 0.13
Hps3-201ENSMUST00000012580 Fgd6Q69ZL1 1399 aa15.85■□□□□ 0.13
Hps3-201ENSMUST00000012580 Tnpo1Q8BFY9 898 aaKnown RBP15.85■□□□□ 0.13
Hps3-201ENSMUST00000012580 Gm14025A2AP89 1413 aa15.84■□□□□ 0.13
Hps3-201ENSMUST00000012580 Smc5Q8CG46 1101 aaKnown RBP15.84■□□□□ 0.13
Hps3-201ENSMUST00000012580 Zmym4A2A791 1549 aaKnown RBP15.83■□□□□ 0.13
Hps3-201ENSMUST00000012580 Map7O88735 730 aa15.83■□□□□ 0.13
Hps3-201ENSMUST00000012580 Adamts12Q811B3 1600 aa15.83■□□□□ 0.12
Hps3-201ENSMUST00000012580 Stk11ipQ3TAA7 1072 aa15.81■□□□□ 0.12
Hps3-201ENSMUST00000012580 Caskin1Q6P9K8 1431 aa15.81■□□□□ 0.12
Hps3-201ENSMUST00000012580 Arhgef11Q68FM7 1552 aa15.81■□□□□ 0.12
Hps3-201ENSMUST00000012580 Ccdc146E9Q9F7 977 aa15.8■□□□□ 0.12
Hps3-201ENSMUST00000012580 Dusp27Q148W8 1138 aa15.8■□□□□ 0.12
Hps3-201ENSMUST00000012580 Stard8Q8K031 1019 aa15.8■□□□□ 0.12
Hps3-201ENSMUST00000012580 CenpjQ569L8 1344 aa15.8■□□□□ 0.12
Hps3-201ENSMUST00000012580 Cpsf1Q9EPU4 1441 aaKnown RBP15.8■□□□□ 0.12
Hps3-201ENSMUST00000012580 Supt6hQ62383 1726 aaKnown RBP15.79■□□□□ 0.12
Hps3-201ENSMUST00000012580 G3bp1P97855 465 aaKnown RBP15.79■□□□□ 0.12
Hps3-201ENSMUST00000012580 Trim44Q9QXA7 346 aa15.79■□□□□ 0.12
Hps3-201ENSMUST00000012580 Ylpm1Q9R0I7 1386 aaKnown RBP15.79■□□□□ 0.12
Hps3-201ENSMUST00000012580 Q9D9H8 365 aa15.78■□□□□ 0.12
Hps3-201ENSMUST00000012580 Ttc21bQ0HA38 1315 aa15.78■□□□□ 0.12
Hps3-201ENSMUST00000012580 Nup160Q9Z0W3 1402 aaKnown RBP15.78■□□□□ 0.12
Hps3-201ENSMUST00000012580 Nkx1-2P42580 305 aa15.78■□□□□ 0.12
Hps3-201ENSMUST00000012580 Ythdc1E9Q5K9 736 aaKnown RBP15.77■□□□□ 0.11
Hps3-201ENSMUST00000012580 SlkO54988 1233 aa15.77■□□□□ 0.11
Hps3-201ENSMUST00000012580 Fancd2Q80V62 1450 aa15.76■□□□□ 0.11
Hps3-201ENSMUST00000012580 Cc2d1aQ8K1A6 943 aa15.76■□□□□ 0.11
Hps3-201ENSMUST00000012580 KnstrnQ9D9Z1 312 aaKnown RBP15.76■□□□□ 0.11
Hps3-201ENSMUST00000012580 AU015836B2RUM3 263 aa15.76■□□□□ 0.11
Hps3-201ENSMUST00000012580 Rbm25B2RY56 838 aaKnown RBP15.76■□□□□ 0.11
Hps3-201ENSMUST00000012580 Ppp2r3aB2RXC8 1150 aa15.75■□□□□ 0.11
Hps3-201ENSMUST00000012580 Chmp4cQ9D7F7 232 aa15.75■□□□□ 0.11
Hps3-201ENSMUST00000012580 Fhod3Q76LL6 1578 aa15.75■□□□□ 0.11
Hps3-201ENSMUST00000012580 Map3k4O08648 1597 aa15.74■□□□□ 0.11
Hps3-201ENSMUST00000012580 Cald1E9QA15 768 aaKnown RBP15.74■□□□□ 0.11
Hps3-201ENSMUST00000012580 Sox12Q04890 314 aa15.74■□□□□ 0.11
Hps3-201ENSMUST00000012580 Duxf3A0A0N4SV92 674 aa15.73■□□□□ 0.11
Hps3-201ENSMUST00000012580 IbspQ61711 324 aa15.73■□□□□ 0.11
Hps3-201ENSMUST00000012580 PtprgQ05909 1442 aa15.73■□□□□ 0.11
Hps3-201ENSMUST00000012580 Abca16E9PWJ7 1678 aa15.73■□□□□ 0.11
Hps3-201ENSMUST00000012580 Aplp1Q03157 653 aa15.73■□□□□ 0.11
Hps3-201ENSMUST00000012580 Mapkbp1Q6NS57 1503 aa15.73■□□□□ 0.11
Hps3-201ENSMUST00000012580 Uspl1Q3ULM6 1089 aa15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 Zfp777B9EKF4 885 aa15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 Tnnt1O88346 262 aa15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 PtmaP26350 111 aa15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 Cog6Q8R3I3 657 aa15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 Atp2b2Q9R0K7 1198 aa15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 DroshaQ5HZJ0 1373 aaKnown RBP15.72■□□□□ 0.11
Hps3-201ENSMUST00000012580 Ppp1r3fQ9JIG4 799 aa15.71■□□□□ 0.11
Hps3-201ENSMUST00000012580 Setbp1Q9Z180 1582 aa15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms