RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeastyeast

Gene snR19, Length 568 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR19snR19 SBH2P52871 88 aa4.19□□□□□ -1.74
snR19snR19 SYF2P53277 215 aaPredicted RBP4.19□□□□□ -1.74
snR19snR19 GPI15P53961 229 aa4.19□□□□□ -1.74
snR19snR19 VPS28Q02767 242 aa4.19□□□□□ -1.74
snR19snR19 CGI121Q03705 181 aaKnown RBP4.19□□□□□ -1.74
snR19snR19 YMR315WQ04869 349 aaKnown RBP4.19□□□□□ -1.74
snR19snR19 GPI11Q06636 219 aa4.19□□□□□ -1.74
snR19snR19 IPK1Q06667 281 aa4.19□□□□□ -1.74
snR19snR19 PEX11Q12462 236 aa4.19□□□□□ -1.74
snR19snR19 FRE6Q12473 712 aa4.19□□□□□ -1.74
snR19snR19 SFG1Q12507 346 aa4.19□□□□□ -1.74
snR19snR19 SLO1Q3E784 85 aa4.19□□□□□ -1.74
snR19snR19 YLR099W-AQ3E798 87 aa4.19□□□□□ -1.74
snR19snR19 PHO2P07269 559 aa4.18□□□□□ -1.74
snR19snR19 LSB5P25369 354 aa4.18□□□□□ -1.74
snR19snR19 LDB16P25587 256 aa4.18□□□□□ -1.74
snR19snR19 FRE2P36033 711 aa4.18□□□□□ -1.74
snR19snR19 PMU1P36069 295 aa4.18□□□□□ -1.74
snR19snR19 GCV3P39726 170 aaPredicted RBP4.18□□□□□ -1.74
snR19snR19 GDI1P39958 451 aaKnown RBP4.18□□□□□ -1.74
snR19snR19 ISC1P40015 477 aaKnown RBP4.18□□□□□ -1.74
snR19snR19 YER188WP40103 239 aa4.18□□□□□ -1.74
snR19snR19 YJL068CP40363 299 aa4.18□□□□□ -1.74
snR19snR19 BMT5P40493 336 aa4.18□□□□□ -1.74
snR19snR19 TAD2P47058 250 aa4.18□□□□□ -1.74
snR19snR19 PET130P47065 347 aa4.18□□□□□ -1.74
snR19snR19 GPI14P47088 403 aaKnown RBP4.18□□□□□ -1.74
snR19snR19 MPC1P53157 130 aaKnown RBP4.18□□□□□ -1.74
snR19snR19 FMP41P53889 259 aaKnown RBP4.18□□□□□ -1.74
snR19snR19 YPL067CQ02754 198 aa4.18□□□□□ -1.74
snR19snR19 YMR155WQ03795 547 aa4.18□□□□□ -1.74
snR19snR19 YDR222WQ04925 415 aa4.18□□□□□ -1.74
snR19snR19 ERP1Q05359 219 aaKnown RBP4.18□□□□□ -1.74
snR19snR19 TMS1Q12116 473 aa4.18□□□□□ -1.74
snR19snR19 PST1Q12355 444 aa4.18□□□□□ -1.74
snR19snR19 YLR361C-AQ3E795 98 aa4.18□□□□□ -1.74
snR19snR19 YIL134C-AQ45U18 67 aa4.18□□□□□ -1.74
snR19snR19 COX2P00410 251 aa4.17□□□□□ -1.74
snR19snR19 TIR1P10863 254 aa4.17□□□□□ -1.74
snR19snR19 GCY1P14065 312 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
snR19snR19 RPB5P20434 215 aa4.17□□□□□ -1.74
snR19snR19 PUT3P25502 979 aaPredicted RBP4.17□□□□□ -1.74
snR19snR19 KKQ8P36004 724 aa4.17□□□□□ -1.74
snR19snR19 RIB1P38066 345 aa4.17□□□□□ -1.74
snR19snR19 BNA4P38169 460 aa4.17□□□□□ -1.74
snR19snR19 YHL044WP38727 235 aa4.17□□□□□ -1.74
snR19snR19 LSM5P40089 93 aaKnown RBP4.17□□□□□ -1.74
snR19snR19 FLX1P40464 311 aa4.17□□□□□ -1.74
snR19snR19 YIL012WP40551 113 aa4.17□□□□□ -1.74
snR19snR19 SYS1P41544 203 aa4.17□□□□□ -1.74
snR19snR19 OST3P48439 350 aa4.17□□□□□ -1.74
snR19snR19 PHB2P50085 310 aa4.17□□□□□ -1.74
snR19snR19 YNL184CP53876 108 aa4.17□□□□□ -1.74
snR19snR19 ELC1Q03071 99 aa4.17□□□□□ -1.74
snR19snR19 YMR209CQ03648 457 aa4.17□□□□□ -1.74
snR19snR19 PKR1Q03880 122 aaKnown RBP4.17□□□□□ -1.74
snR19snR19 YMR087WQ04299 284 aa4.17□□□□□ -1.74
snR19snR19 GMC1Q04399 608 aa4.17□□□□□ -1.74
snR19snR19 YMR317WQ04893 1140 aa4.17□□□□□ -1.74
snR19snR19 RRP45Q05636 305 aaKnown RBP4.17□□□□□ -1.74
snR19snR19 THP1Q08231 455 aa4.17□□□□□ -1.74
snR19snR19 PAR32Q12515 295 aaKnown RBP4.17□□□□□ -1.74
snR19snR19 RPL13AQ12690 199 aaPredicted RBP4.17□□□□□ -1.74
snR19snR19 SEC16P48415 2195 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 THP2O13539 261 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 TDH2P00358 332 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 TDH3P00359 332 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
snR19snR19 MSW1P04803 379 aa4.16□□□□□ -1.74
snR19snR19 PUT1P09368 476 aa4.16□□□□□ -1.74
snR19snR19 RPL27AP0C2H6 136 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 RPL27BP0C2H7 136 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 YOL163WP0CF20 169 aa4.16□□□□□ -1.74
snR19snR19 SCL1P21243 252 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 STP22P25604 385 aa4.16□□□□□ -1.74
snR19snR19 MSK1P32048 576 aa4.16□□□□□ -1.74
snR19snR19 UPS2P35200 230 aa4.16□□□□□ -1.74
snR19snR19 PRP39P39682 629 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 PRE6P40303 254 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 ATG18P43601 500 aa4.16□□□□□ -1.74
snR19snR19 SDT1P53078 280 aa4.16□□□□□ -1.74
snR19snR19 ACT1P60010 375 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 UPS3Q04006 179 aa4.16□□□□□ -1.74
snR19snR19 CNL1Q06333 122 aa4.16□□□□□ -1.74
snR19snR19 MRPL35Q06678 367 aa4.16□□□□□ -1.74
snR19snR19 PAU23Q07987 124 aa4.16□□□□□ -1.74
snR19snR19 YOL131WQ08270 108 aa4.16□□□□□ -1.74
snR19snR19 GRE1Q08969 168 aa4.16□□□□□ -1.74
snR19snR19 FSF1Q12029 327 aaKnown RBP4.16□□□□□ -1.74
snR19snR19 YLR118CQ12354 227 aa4.16□□□□□ -1.74
snR19snR19 PAU17Q12370 124 aa4.16□□□□□ -1.74
snR19snR19 ISA2Q12425 185 aa4.16□□□□□ -1.74
snR19snR19 EAF3Q12432 401 aa4.16□□□□□ -1.74
snR19snR19 HIS1P00498 297 aaKnown RBP4.15□□□□□ -1.75
snR19snR19 YKR104WP0CE69 306 aa4.15□□□□□ -1.75
snR19snR19 MRS3P10566 314 aa4.15□□□□□ -1.75
snR19snR19 AMD1P15274 810 aaKnown RBP4.15□□□□□ -1.75
snR19snR19 SEC22P22214 214 aa4.15□□□□□ -1.75
snR19snR19 PBN1P25580 416 aa4.15□□□□□ -1.75
snR19snR19 MSN2P33748 704 aa4.15□□□□□ -1.75
snR19snR19 TMA19P35691 167 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 252.4 ms