RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	YBR096W	P38256	230 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	SUR2	P38992	349 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	LSM4	P40070	187 aa	Known RBP	6.01	□□□□□ -1.45
SNT309	YPR101W	FLX1	P40464	311 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	SMD3	P43321	101 aa	Known RBP	6.01	□□□□□ -1.45
SNT309	YPR101W	YJR012C	P47087	207 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	BNS1	P50084	137 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	MSO1	P53604	210 aa	Known RBP	6.01	□□□□□ -1.45
SNT309	YPR101W	YNR048W	P53740	393 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	SKO1	Q02100	647 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	YPL039W	Q03080	316 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	YDR102C	Q03864	110 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	YMR090W	Q04304	227 aa	Known RBP	6.01	□□□□□ -1.45
SNT309	YPR101W	HOF1	Q05080	669 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	AGC1	Q12482	902 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	HUT1	Q12520	339 aa		6.01	□□□□□ -1.45
SNT309	YPR101W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	6	□□□□□ -1.45	not detected
SNT309	YPR101W	CDC28	P00546	298 aa	Known RBP	6	□□□□□ -1.45
SNT309	YPR101W	YLL053C	P0CD98	152 aa		6	□□□□□ -1.45
SNT309	YPR101W	RPL30	P14120	105 aa	Known RBP	6	□□□□□ -1.45
SNT309	YPR101W	MRS4	P23500	304 aa		6	□□□□□ -1.45
SNT309	YPR101W	YCR006C	P25350	157 aa		6	□□□□□ -1.45
SNT309	YPR101W	YCR101C	P25607	182 aa		6	□□□□□ -1.45
SNT309	YPR101W	OCH1	P31755	480 aa		6	□□□□□ -1.45
SNT309	YPR101W	MNS1	P32906	549 aa		6	□□□□□ -1.45
SNT309	YPR101W	PEX7	P39108	375 aa		6	□□□□□ -1.45
SNT309	YPR101W	YND1	P40009	630 aa		6	□□□□□ -1.45
SNT309	YPR101W	YGL185C	P53100	379 aa		6	□□□□□ -1.45
SNT309	YPR101W	ERV14	P53173	138 aa		6	□□□□□ -1.45
SNT309	YPR101W	TEX1	P53851	422 aa	Known RBP	6	□□□□□ -1.45
SNT309	YPR101W	AVO2	Q04749	426 aa		6	□□□□□ -1.45
SNT309	YPR101W	FSH2	Q05015	223 aa		6	□□□□□ -1.45
SNT309	YPR101W	HRI1	Q05905	244 aa	Known RBP	6	□□□□□ -1.45
SNT309	YPR101W	MED7	Q08278	222 aa		6	□□□□□ -1.45
SNT309	YPR101W	SWM1	Q12379	170 aa		6	□□□□□ -1.45
SNT309	YPR101W	IZH2	Q12442	317 aa		6	□□□□□ -1.45
SNT309	YPR101W	COA2	Q3E823	68 aa		6	□□□□□ -1.45
SNT309	YPR101W	MDH2	P22133	377 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	LSB5	P25369	354 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	TAX4	P47030	604 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	YGL114W	P53134	725 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	PAU4	P53427	120 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	OCA2	P53949	197 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	YLR179C	Q06252	201 aa	Known RBP	5.99	□□□□□ -1.45
SNT309	YPR101W	TDA6	Q06466	467 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	FCY22	Q12119	530 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	USB1	Q12208	290 aa	Known RBP	5.99	□□□□□ -1.45
SNT309	YPR101W	PRR2	Q12310	699 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	YPR108W-A	Q3E7B3	70 aa		5.99	□□□□□ -1.45
SNT309	YPR101W	SPS4	P09937	338 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	PAU19	P0CE85	124 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	PAU21	P0CE86	164 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	PAU22	P0CE87	164 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	CDC26	P14724	124 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	PAU3	P25610	124 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	PRS2	P38620	318 aa	Known RBP	5.98	□□□□□ -1.45
SNT309	YPR101W	FLO5	P38894	1075 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	GET2	P40056	285 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	ATF1	P40353	525 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	PRM5	P40476	318 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	CFD1	P40558	293 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	MSY1	P48527	492 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	SLX9	P53251	210 aa	Predicted RBP	5.98	□□□□□ -1.45
SNT309	YPR101W	PBP1	P53297	722 aa	Known RBP	5.98	□□□□□ -1.45
SNT309	YPR101W	ALG12	P53730	551 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	CUE4	Q04201	117 aa	Predicted RBP	5.98	□□□□□ -1.45
SNT309	YPR101W	YDL242W	Q07746	117 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	DAP1	Q12091	152 aa		5.98	□□□□□ -1.45
SNT309	YPR101W	COX5B	P00425	151 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU1	P0CE88	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU14	P0CE89	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU6	P0CE90	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU18	P0CE91	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU8	P0CE92	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU11	P0CE93	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	YHR214C-D	P0CX93	97 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PDX1	P16451	410 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PCL1	P24867	279 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	ERV1	P27882	189 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	RPB7	P34087	171 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	MRPL28	P36527	147 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU13	P38725	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	HSP10	P38910	106 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	CCS1	P40202	249 aa	Known RBP	5.97	□□□□□ -1.45
SNT309	YPR101W	LTP1	P40347	161 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PGU1	P47180	361 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PCP1	P53259	346 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	YNL165W	P53891	406 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	ACS1	Q01574	713 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU10	Q03050	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	YDR387C	Q04162	555 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAM18	Q07914	168 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	RFU1	Q08003	200 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU20	Q08322	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	YOR186W	Q08560	144 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	THI72	Q08579	599 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	SME1	Q12330	94 aa	Predicted RBP	5.97	□□□□□ -1.45
SNT309	YPR101W	DCN1	Q12395	269 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	PAU9	Q3E770	120 aa		5.97	□□□□□ -1.45
SNT309	YPR101W	COA6	Q3E846	104 aa		5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms