RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C EFG1Q3E705 233 aaKnown RBP3.26□□□□□ -1.89
VPS21YOR089C YKL183C-AQ3E765 70 aa3.26□□□□□ -1.89
VPS21YOR089C ISD11Q6Q560 94 aa3.26□□□□□ -1.89
VPS21YOR089C RPL27AP0C2H6 136 aaKnown RBP3.25□□□□□ -1.89
VPS21YOR089C RPL27BP0C2H7 136 aaKnown RBP3.25□□□□□ -1.89
VPS21YOR089C GCY1P14065 312 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
VPS21YOR089C YAK1P14680 807 aa3.25□□□□□ -1.89
VPS21YOR089C MER1P16523 270 aa3.25□□□□□ -1.89
VPS21YOR089C ECM13P38195 257 aa3.25□□□□□ -1.89
VPS21YOR089C ARN2P38724 620 aa3.25□□□□□ -1.89
VPS21YOR089C YNL194CP40169 301 aa3.25□□□□□ -1.89
VPS21YOR089C PEP8P40335 379 aa3.25□□□□□ -1.89
VPS21YOR089C HAM1P47119 197 aaKnown RBP3.25□□□□□ -1.89
VPS21YOR089C ILM1P47155 203 aa3.25□□□□□ -1.89
VPS21YOR089C NIF3P53081 288 aa3.25□□□□□ -1.89
VPS21YOR089C SWC7Q06707 132 aa3.25□□□□□ -1.89
VPS21YOR089C IES3Q12345 250 aa3.25□□□□□ -1.89
VPS21YOR089C ATG5Q12380 294 aa3.25□□□□□ -1.89
VPS21YOR089C YMR030W-AQ3E760 96 aa3.25□□□□□ -1.89
VPS21YOR089C YLR422WQ06409 1932 aa3.25□□□□□ -1.89
VPS21YOR089C COX5AP00424 153 aa3.24□□□□□ -1.89
VPS21YOR089C YOL163WP0CF20 169 aa3.24□□□□□ -1.89
VPS21YOR089C SEC14P24280 304 aaKnown RBP3.24□□□□□ -1.89
VPS21YOR089C EHD3P28817 500 aa3.24□□□□□ -1.89
VPS21YOR089C MGM101P32787 269 aaKnown RBP3.24□□□□□ -1.89
VPS21YOR089C NTF2P33331 125 aaKnown RBP3.24□□□□□ -1.89
VPS21YOR089C TRM7P38238 310 aaKnown RBP3.24□□□□□ -1.89
VPS21YOR089C YRB2P40517 327 aa3.24□□□□□ -1.89
VPS21YOR089C TRM9P49957 279 aa3.24□□□□□ -1.89
VPS21YOR089C OSH6Q02201 448 aa3.24□□□□□ -1.89
VPS21YOR089C PIN3Q06449 215 aa3.24□□□□□ -1.89
VPS21YOR089C PST1Q12355 444 aa3.24□□□□□ -1.89
VPS21YOR089C TAO3P40468 2376 aa3.23□□□□□ -1.89
VPS21YOR089C COS2P0CX12 379 aa3.23□□□□□ -1.89
VPS21YOR089C COS3P0CX13 379 aa3.23□□□□□ -1.89
VPS21YOR089C NOP1P15646 327 aaKnown RBP3.23□□□□□ -1.89
VPS21YOR089C YPK2P18961 677 aa3.23□□□□□ -1.89
VPS21YOR089C RPC19P28000 142 aaKnown RBP3.23□□□□□ -1.89
VPS21YOR089C SFC1P33303 322 aa3.23□□□□□ -1.89
VPS21YOR089C YOX1P34161 385 aa3.23□□□□□ -1.89
VPS21YOR089C SUR2P38992 349 aa3.23□□□□□ -1.89
VPS21YOR089C YIR035CP40579 254 aa3.23□□□□□ -1.89
VPS21YOR089C COS4P43542 379 aa3.23□□□□□ -1.89
VPS21YOR089C NUP57P48837 541 aa3.23□□□□□ -1.89
VPS21YOR089C CWC23P52868 283 aaPredicted RBP3.23□□□□□ -1.89
VPS21YOR089C YOR186WQ08560 144 aa3.23□□□□□ -1.89
VPS21YOR089C YPL264CQ08980 353 aa3.23□□□□□ -1.89
VPS21YOR089C HTB1P02293 131 aaKnown RBP3.22□□□□□ -1.89
VPS21YOR089C HTB2P02294 131 aa3.22□□□□□ -1.89
VPS21YOR089C BUD13P46947 266 aaPredicted RBP3.22□□□□□ -1.89
VPS21YOR089C ADO1P47143 340 aaKnown RBP3.22□□□□□ -1.89
VPS21YOR089C BRR6P53062 197 aa3.22□□□□□ -1.89
VPS21YOR089C GET1P53192 235 aa3.22□□□□□ -1.89
VPS21YOR089C TIM13P53299 105 aa3.22□□□□□ -1.89
VPS21YOR089C YOL019WQ08157 551 aa3.22□□□□□ -1.89
VPS21YOR089C VPS13Q07878 3144 aa3.22□□□□□ -1.89
VPS21YOR089C UBR2Q07963 1872 aa3.22□□□□□ -1.89
VPS21YOR089C URA6P15700 204 aa3.21□□□□□ -1.9
VPS21YOR089C PRE7P23724 241 aaKnown RBP3.21□□□□□ -1.9
VPS21YOR089C YBL081WP38180 368 aaKnown RBP3.21□□□□□ -1.9
VPS21YOR089C IKI1P38874 309 aa3.21□□□□□ -1.9
VPS21YOR089C IRC18P47056 224 aa3.21□□□□□ -1.9
VPS21YOR089C AIF1P52923 378 aa3.21□□□□□ -1.9
VPS21YOR089C MIG2P53035 382 aa3.21□□□□□ -1.9
VPS21YOR089C MGA1P53050 456 aa3.21□□□□□ -1.9
VPS21YOR089C HST4P53688 370 aa3.21□□□□□ -1.9
VPS21YOR089C CSN9Q03981 162 aa3.21□□□□□ -1.9
VPS21YOR089C TPO4Q12256 659 aa3.21□□□□□ -1.9
VPS21YOR089C PPH21P23594 369 aa3.2□□□□□ -1.9
VPS21YOR089C RNP1P32385 249 aa3.2□□□□□ -1.9
VPS21YOR089C AST1P35183 429 aa3.2□□□□□ -1.9
VPS21YOR089C PRY2P36110 329 aa3.2□□□□□ -1.9
VPS21YOR089C YJL028WP47062 111 aa3.2□□□□□ -1.9
VPS21YOR089C YJR149WP47177 404 aa3.2□□□□□ -1.9
VPS21YOR089C YNL046WP53956 172 aa3.2□□□□□ -1.9
VPS21YOR089C YPL039WQ03080 316 aa3.2□□□□□ -1.9
VPS21YOR089C LDB18Q07887 179 aa3.2□□□□□ -1.9
VPS21YOR089C YPR202WQ08993 238 aa3.2□□□□□ -1.9
VPS21YOR089C YPR063CQ12160 140 aa3.2□□□□□ -1.9
VPS21YOR089C PRR2Q12310 699 aa3.2□□□□□ -1.9
VPS21YOR089C YPL247CQ12523 523 aa3.2□□□□□ -1.9
VPS21YOR089C IPP1P00817 287 aaKnown RBP3.19□□□□□ -1.9
VPS21YOR089C ERD2P18414 219 aa3.19□□□□□ -1.9
VPS21YOR089C YCR090CP25654 182 aaKnown RBP3.19□□□□□ -1.9
VPS21YOR089C YCR099CP25657 155 aa3.19□□□□□ -1.9
VPS21YOR089C TRM5P38793 499 aa3.19□□□□□ -1.9
VPS21YOR089C ECO1P43605 281 aa3.19□□□□□ -1.9
VPS21YOR089C YFR045WP43617 309 aa3.19□□□□□ -1.9
VPS21YOR089C ALG13P53178 202 aa3.19□□□□□ -1.9
VPS21YOR089C ALG9P53868 555 aaKnown RBP3.19□□□□□ -1.9
VPS21YOR089C SLM2P53955 656 aa3.19□□□□□ -1.9
VPS21YOR089C YDR476CQ03362 224 aa3.19□□□□□ -1.9
VPS21YOR089C GAS3Q03655 524 aa3.19□□□□□ -1.9
VPS21YOR089C YLR046CQ12253 270 aa3.19□□□□□ -1.9
VPS21YOR089C LSO2Q3E772 92 aaKnown RBP3.19□□□□□ -1.9
VPS21YOR089C YDR157WA0A023PZE8 133 aa3.18□□□□□ -1.9
VPS21YOR089C ZWF1P11412 505 aaKnown RBP3.18□□□□□ -1.9
VPS21YOR089C NSP1P14907 823 aaKnown RBP3.18□□□□□ -1.9
VPS21YOR089C PTM1P32857 523 aa3.18□□□□□ -1.9
VPS21YOR089C TAF14P35189 244 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms