RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W VPS28Q02767 242 aa4.64□□□□□ -1.67
SPG4YMR107W PKR1Q03880 122 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W MTQ2Q03920 221 aaPredicted RBP4.64□□□□□ -1.67
SPG4YMR107W SNO4Q04902 237 aa4.64□□□□□ -1.67
SPG4YMR107W HRI1Q05905 244 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W HSP32Q08992 237 aa4.64□□□□□ -1.67
SPG4YMR107W TPT1Q12272 230 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W PAR32Q12515 295 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W STE4P18851 423 aa4.63□□□□□ -1.67
SPG4YMR107W ARF2P19146 181 aaKnown RBP4.63□□□□□ -1.67
SPG4YMR107W ELO2P25358 347 aa4.63□□□□□ -1.67
SPG4YMR107W AFG1P32317 509 aa4.63□□□□□ -1.67
SPG4YMR107W SSH4P32343 579 aa4.63□□□□□ -1.67
SPG4YMR107W YKL187CP34231 750 aa4.63□□□□□ -1.67
SPG4YMR107W AIM29P36154 155 aa4.63□□□□□ -1.67
SPG4YMR107W RRN10P38204 145 aa4.63□□□□□ -1.67
SPG4YMR107W OM14P38325 134 aa4.63□□□□□ -1.67
SPG4YMR107W BTT1P40314 149 aaPredicted RBP4.63□□□□□ -1.67
SPG4YMR107W YGR250CP53316 781 aaKnown RBP4.63□□□□□ -1.67
SPG4YMR107W PAU4P53427 120 aa4.63□□□□□ -1.67
SPG4YMR107W YNR066CP53752 436 aa4.63□□□□□ -1.67
SPG4YMR107W IZH1Q03419 316 aa4.63□□□□□ -1.67
SPG4YMR107W YDR248CQ03786 193 aa4.63□□□□□ -1.67
SPG4YMR107W YDL242WQ07746 117 aa4.63□□□□□ -1.67
SPG4YMR107W YLR030WQ07967 263 aa4.63□□□□□ -1.67
SPG4YMR107W YOR378WQ08902 515 aa4.63□□□□□ -1.67
SPG4YMR107W FRE8Q12209 686 aa4.63□□□□□ -1.67
SPG4YMR107W COX5BP00425 151 aa4.62□□□□□ -1.67
SPG4YMR107W PAU1P0CE88 120 aa4.62□□□□□ -1.67
SPG4YMR107W PAU14P0CE89 120 aa4.62□□□□□ -1.67
SPG4YMR107W PAU6P0CE90 120 aa4.62□□□□□ -1.67
SPG4YMR107W PAU18P0CE91 120 aa4.62□□□□□ -1.67
SPG4YMR107W PAU8P0CE92 120 aa4.62□□□□□ -1.67
SPG4YMR107W PAU11P0CE93 120 aa4.62□□□□□ -1.67
SPG4YMR107W YFL068WP0CX99 160 aa4.62□□□□□ -1.67
SPG4YMR107W YLL066W-AP0CY00 160 aa4.62□□□□□ -1.67
SPG4YMR107W YLL067W-AP0CY01 160 aa4.62□□□□□ -1.67
SPG4YMR107W PDX1P16451 410 aa4.62□□□□□ -1.67
SPG4YMR107W ERG1P32476 496 aaKnown RBP4.62□□□□□ -1.67
SPG4YMR107W TRS65P32893 560 aa4.62□□□□□ -1.67
SPG4YMR107W PAU16P35994 123 aa4.62□□□□□ -1.67
SPG4YMR107W YBR292CP38357 123 aa4.62□□□□□ -1.67
SPG4YMR107W PAU13P38725 120 aa4.62□□□□□ -1.67
SPG4YMR107W HSP10P38910 106 aa4.62□□□□□ -1.67
SPG4YMR107W SMD3P43321 101 aaKnown RBP4.62□□□□□ -1.67
SPG4YMR107W SAM37P50110 327 aa4.62□□□□□ -1.67
SPG4YMR107W MPP6P53725 186 aaPredicted RBP4.62□□□□□ -1.67
SPG4YMR107W PAU10Q03050 120 aa4.62□□□□□ -1.67
SPG4YMR107W CCE1Q03702 353 aa4.62□□□□□ -1.67
SPG4YMR107W YMR166CQ03829 368 aa4.62□□□□□ -1.67
SPG4YMR107W YML096WQ04489 525 aa4.62□□□□□ -1.67
SPG4YMR107W HRT1Q08273 121 aa4.62□□□□□ -1.67
SPG4YMR107W PAU20Q08322 120 aa4.62□□□□□ -1.67
SPG4YMR107W SWM1Q12379 170 aa4.62□□□□□ -1.67
SPG4YMR107W PAU9Q3E770 120 aa4.62□□□□□ -1.67
SPG4YMR107W RPS13P05756 151 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W CPA1P07258 411 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W MDH2P22133 377 aa4.61□□□□□ -1.67
SPG4YMR107W GAS1P22146 559 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W ERG2P32352 222 aa4.61□□□□□ -1.67
SPG4YMR107W MDL1P33310 695 aa4.61□□□□□ -1.67
SPG4YMR107W PAD1P33751 242 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
SPG4YMR107W PMU1P36069 295 aa4.61□□□□□ -1.67
SPG4YMR107W YKL075CP36083 450 aa4.61□□□□□ -1.67
SPG4YMR107W POP2P39008 433 aa4.61□□□□□ -1.67
SPG4YMR107W PAC2P39937 518 aa4.61□□□□□ -1.67
SPG4YMR107W GIM4P40005 111 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W IRC22P40006 225 aa4.61□□□□□ -1.67
SPG4YMR107W YNL208WP40159 199 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W RPL13BP40212 199 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W YIL161WP40449 235 aaKnown RBP4.61□□□□□ -1.67
SPG4YMR107W SMK1P41808 388 aa4.61□□□□□ -1.67
SPG4YMR107W YJR011CP47086 261 aaPredicted RBP4.61□□□□□ -1.67
SPG4YMR107W TTI2P47168 421 aa4.61□□□□□ -1.67
SPG4YMR107W HSV2P50079 448 aaPredicted RBP4.61□□□□□ -1.67
SPG4YMR107W VEL1P53058 206 aa4.61□□□□□ -1.67
SPG4YMR107W YGR017WP53210 297 aa4.61□□□□□ -1.67
SPG4YMR107W YLR152CP54072 576 aa4.61□□□□□ -1.67
SPG4YMR107W YDR366CP87287 132 aa4.61□□□□□ -1.67
SPG4YMR107W MRPL1Q04599 285 aa4.61□□□□□ -1.67
SPG4YMR107W MRPL51Q06090 140 aaPredicted RBP4.61□□□□□ -1.67
SPG4YMR107W VAM3Q12241 283 aa4.61□□□□□ -1.67
SPG4YMR107W RPL13AQ12690 199 aaPredicted RBP4.61□□□□□ -1.67
SPG4YMR107W YCR024C-BQ3E7Z8 88 aa4.61□□□□□ -1.67
SPG4YMR107W CYC7P00045 113 aa4.6□□□□□ -1.67
SPG4YMR107W MAK32P23060 363 aa4.6□□□□□ -1.67
SPG4YMR107W SRP21P32342 167 aa4.6□□□□□ -1.67
SPG4YMR107W UME6P39001 836 aa4.6□□□□□ -1.67
SPG4YMR107W BDH1P39714 382 aa4.6□□□□□ -1.67
SPG4YMR107W PIC2P40035 300 aa4.6□□□□□ -1.67
SPG4YMR107W YER134CP40081 178 aa4.6□□□□□ -1.67
SPG4YMR107W NAS2P40555 220 aa4.6□□□□□ -1.67
SPG4YMR107W TAF4P50105 388 aa4.6□□□□□ -1.67
SPG4YMR107W RIB4P50861 169 aaPredicted RBP4.6□□□□□ -1.67
SPG4YMR107W FLC3P53121 802 aa4.6□□□□□ -1.67
SPG4YMR107W DUG3P53871 357 aa4.6□□□□□ -1.67
SPG4YMR107W CGI121Q03705 181 aaKnown RBP4.6□□□□□ -1.67
SPG4YMR107W CAB5Q03941 241 aa4.6□□□□□ -1.67
SPG4YMR107W MCH1Q07376 486 aa4.6□□□□□ -1.67
SPG4YMR107W YDR262WQ12331 272 aa4.6□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms