RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP188	YML103C	ARC19	P33204	171 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	TAF14	P35189	244 aa		0.97	□□□□□ -2.25
NUP188	YML103C	ERG25	P53045	309 aa		0.97	□□□□□ -2.25
NUP188	YML103C	NOP19	P53317	196 aa	Predicted RBP	0.97	□□□□□ -2.25
NUP188	YML103C	MAK3	Q03503	176 aa		0.97	□□□□□ -2.25
NUP188	YML103C	EMC6	Q12431	108 aa		0.97	□□□□□ -2.25
NUP188	YML103C	TUS1	Q06412	1307 aa		0.96	□□□□□ -2.26
NUP188	YML103C	CDC8	P00572	216 aa		0.96	□□□□□ -2.26
NUP188	YML103C	CDC7	P06243	507 aa		0.96	□□□□□ -2.26
NUP188	YML103C	CMD1	P06787	147 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	ADE1	P27616	306 aa		0.96	□□□□□ -2.26
NUP188	YML103C	NUF2	P33895	451 aa		0.96	□□□□□ -2.26
NUP188	YML103C	ICE2	P40499	491 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YNL247W	P53852	767 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	SWP1	Q02795	286 aa		0.96	□□□□□ -2.26
NUP188	YML103C	GIM5	Q04493	163 aa		0.96	□□□□□ -2.26
NUP188	YML103C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
NUP188	YML103C	AGC1	Q12482	902 aa		0.96	□□□□□ -2.26
NUP188	YML103C	TSC3	Q3E790	80 aa		0.96	□□□□□ -2.26
NUP188	YML103C	IKI3	Q06706	1349 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	DSF1	P0CX08	502 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YNR073C	P0CX09	502 aa		0.96	□□□□□ -2.26
NUP188	YML103C	BET1	P22804	142 aa		0.96	□□□□□ -2.26
NUP188	YML103C	UMP1	P38293	148 aa		0.96	□□□□□ -2.26
NUP188	YML103C	GLE2	P40066	365 aa		0.96	□□□□□ -2.26
NUP188	YML103C	RPA43	P46669	326 aa		0.96	□□□□□ -2.26
NUP188	YML103C	TOS8	P53147	276 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YGR219W	P53307	113 aa		0.96	□□□□□ -2.26
NUP188	YML103C	HNT1	Q04344	158 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	LPP1	Q04396	274 aa		0.96	□□□□□ -2.26
NUP188	YML103C	PSF1	Q12488	208 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YBL112C	Q3E7Y4	105 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YDR157W	A0A023PZE8	133 aa		0.96	□□□□□ -2.26
NUP188	YML103C	TOM40	P23644	387 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	SKI6	P46948	246 aa	Predicted RBP	0.96	□□□□□ -2.26
NUP188	YML103C	MDM34	P53083	459 aa		0.96	□□□□□ -2.26
NUP188	YML103C	TMA20	P89886	181 aa	Predicted RBP	0.96	□□□□□ -2.26
NUP188	YML103C	NUP49	Q02199	472 aa		0.96	□□□□□ -2.26
NUP188	YML103C	NIP7	Q08962	181 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	YLR412C-A	Q3E742	68 aa		0.96	□□□□□ -2.26
NUP188	YML103C	QCR2	P07257	368 aa		0.96	□□□□□ -2.26
NUP188	YML103C	CPA1	P07258	411 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	MAK5	P38112	773 aa	Predicted RBP	0.96	□□□□□ -2.26
NUP188	YML103C	LSM4	P40070	187 aa	Known RBP	0.96	□□□□□ -2.26
NUP188	YML103C	YER134C	P40081	178 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YJL144W	P47009	104 aa		0.96	□□□□□ -2.26
NUP188	YML103C	TDA4	P47153	279 aa		0.96	□□□□□ -2.26
NUP188	YML103C	YGR050C	P53231	118 aa		0.96	□□□□□ -2.26
NUP188	YML103C	NEJ1	Q06148	342 aa		0.96	□□□□□ -2.26
NUP188	YML103C	MHT1	Q12525	324 aa		0.96	□□□□□ -2.26
NUP188	YML103C	RAS2	P01120	322 aa	Known RBP	0.95	□□□□□ -2.26
NUP188	YML103C	RAD10	P06838	210 aa		0.95	□□□□□ -2.26
NUP188	YML103C	SCO1	P23833	295 aa		0.95	□□□□□ -2.26
NUP188	YML103C	CNB1	P25296	175 aa		0.95	□□□□□ -2.26
NUP188	YML103C	VMA11	P32842	164 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YBL081W	P38180	368 aa	Known RBP	0.95	□□□□□ -2.26
NUP188	YML103C	SRP14	P38985	146 aa		0.95	□□□□□ -2.26
NUP188	YML103C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	0.95	□□□□□ -2.26	not detected
NUP188	YML103C	YPR195C	Q06594	109 aa		0.95	□□□□□ -2.26
NUP188	YML103C	ALG13	P53178	202 aa		0.95	□□□□□ -2.26
NUP188	YML103C	COS6	P53344	381 aa		0.95	□□□□□ -2.26
NUP188	YML103C	MPA43	P53583	542 aa	Predicted RBP	0.95	□□□□□ -2.26
NUP188	YML103C	NRK1	P53915	240 aa		0.95	□□□□□ -2.26
NUP188	YML103C	RSM10	Q03201	203 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YDR476C	Q03362	224 aa		0.95	□□□□□ -2.26
NUP188	YML103C	ATG39	Q06159	398 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YOR268C	Q08734	132 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YPR011C	Q12251	326 aa		0.95	□□□□□ -2.26
NUP188	YML103C	PRM7	Q12459	698 aa		0.95	□□□□□ -2.26
NUP188	YML103C	SIR2	P06700	562 aa		0.95	□□□□□ -2.26
NUP188	YML103C	RAD51	P25454	400 aa		0.95	□□□□□ -2.26
NUP188	YML103C	MIG1	P27705	504 aa		0.95	□□□□□ -2.26
NUP188	YML103C	TVP38	P36164	337 aa		0.95	□□□□□ -2.26
NUP188	YML103C	AVT2	P39981	480 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YER034W	P40022	185 aa	Known RBP	0.95	□□□□□ -2.26
NUP188	YML103C	YNL140C	P53910	189 aa		0.95	□□□□□ -2.26
NUP188	YML103C	SUE1	Q06524	206 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YOL019W	Q08157	551 aa		0.95	□□□□□ -2.26
NUP188	YML103C	NSL1	Q12143	216 aa		0.95	□□□□□ -2.26
NUP188	YML103C	ODC2	Q99297	307 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YPR170W-B	P0C5R9	85 aa		0.95	□□□□□ -2.26
NUP188	YML103C	RPB3	P16370	318 aa	Known RBP	0.95	□□□□□ -2.26
NUP188	YML103C	GRX2	P17695	143 aa	Known RBP	0.95	□□□□□ -2.26
NUP188	YML103C	PET9	P18239	318 aa	Known RBP	0.95	□□□□□ -2.26
NUP188	YML103C	MEI4	P29467	408 aa		0.95	□□□□□ -2.26
NUP188	YML103C	SEC17	P32602	292 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YBR209W	P38311	105 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YBR285W	P38354	144 aa		0.95	□□□□□ -2.26
NUP188	YML103C	IRC22	P40006	225 aa		0.95	□□□□□ -2.26
NUP188	YML103C	PGD1	P40356	397 aa		0.95	□□□□□ -2.26
NUP188	YML103C	GON7	P46984	123 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YNL184C	P53876	108 aa		0.95	□□□□□ -2.26
NUP188	YML103C	YLR460C	P54007	376 aa		0.95	□□□□□ -2.26
NUP188	YML103C	CLP1	Q08685	445 aa	Predicted RBP	0.95	□□□□□ -2.26
NUP188	YML103C	SWI1	P09547	1314 aa		0.94	□□□□□ -2.26
NUP188	YML103C	MBF1	O14467	151 aa	Known RBP	0.94	□□□□□ -2.26
NUP188	YML103C	REP2	P03872	296 aa		0.94	□□□□□ -2.26
NUP188	YML103C	OAC1	P32332	324 aa		0.94	□□□□□ -2.26
NUP188	YML103C	TFC1	P32367	649 aa		0.94	□□□□□ -2.26
NUP188	YML103C	SPS18	P32572	300 aa		0.94	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms