RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASH1	YKL185W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
ASH1	YKL185W	WSS1	P38838	269 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	ELO1	P39540	310 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	NSA2	P40078	261 aa	Known RBP	4.89	□□□□□ -1.63
ASH1	YKL185W	MRP51	Q02950	344 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	PKR1	Q03880	122 aa	Known RBP	4.89	□□□□□ -1.63
ASH1	YKL185W	ATC1	Q04005	294 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	GIC2	Q06648	383 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	YFT2	Q06676	274 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	LAS17	Q12446	633 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	RAX2	Q12465	1220 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	UBA3	Q99344	299 aa		4.89	□□□□□ -1.63
ASH1	YKL185W	RPL9A	P05738	191 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	RPL1A	P0CX43	217 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	RPL1B	P0CX44	217 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	NUP1	P20676	1076 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	STP22	P25604	385 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	DEG1	P31115	442 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	SRX1	P36077	127 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	FIG1	P38224	298 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	WSC4	P38739	605 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	YER010C	P40011	234 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	RPL13B	P40212	199 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	GPP1	P41277	250 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	CIS3	P47001	227 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	RPL9B	P51401	191 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	SWS2	P53937	143 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	YMR082C	Q04276	118 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	SME1	Q12330	94 aa	Predicted RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	ATG5	Q12380	294 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	RPL13A	Q12690	199 aa	Predicted RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	BRR2	P32639	2163 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	RPB8	P20436	146 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	MIR1	P23641	311 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	LSB5	P25369	354 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	MXR2	P25566	168 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	PPA2	P28239	310 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	SLM6	P38343	150 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	IRC22	P40006	225 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	YNL208W	P40159	199 aa	Known RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	ERJ5	P43613	295 aa	Predicted RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	RPA34	P47006	233 aa	Predicted RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	ELA1	P53861	379 aa	Predicted RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	CWC27	Q02770	301 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	YPR174C	Q06616	221 aa	Predicted RBP	4.88	□□□□□ -1.63
ASH1	YKL185W	YDL242W	Q07746	117 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	FCY22	Q12119	530 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	YPR053C	Q6Q5F3	151 aa		4.88	□□□□□ -1.63
ASH1	YKL185W	YLR358C	O13565	187 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	MEK1	P24719	497 aa	Predicted RBP	4.87	□□□□□ -1.63
ASH1	YKL185W	KRR1	P25586	316 aa	Predicted RBP	4.87	□□□□□ -1.63
ASH1	YKL185W	COQ3	P27680	312 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	GPX1	P36014	167 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	YHR210C	P38893	341 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	AGE2	P40529	298 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	IRC24	P40580	263 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	ATG27	P46989	271 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	PRY1	P47032	299 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	YJR011C	P47086	261 aa	Predicted RBP	4.87	□□□□□ -1.63
ASH1	YKL185W	YJR012C	P47087	207 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	PAU4	P53427	120 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	RNH201	P53942	307 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	ERG13	P54839	491 aa	Known RBP	4.87	□□□□□ -1.63
ASH1	YKL185W	YPL067C	Q02754	198 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	NCE101	Q02820	53 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	RUB1	Q03919	77 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	YML053C	Q04978	212 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	COA2	Q3E823	68 aa		4.87	□□□□□ -1.63
ASH1	YKL185W	FAS1	P07149	2051 aa	Known RBP	4.87	□□□□□ -1.63
ASH1	YKL185W	RPL31A	P0C2H8	113 aa	Known RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	RPL31B	P0C2H9	113 aa	Known RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	YLL053C	P0CD98	152 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU1	P0CE88	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU14	P0CE89	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU6	P0CE90	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU18	P0CE91	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU8	P0CE92	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU11	P0CE93	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	RPS27A	P35997	82 aa	Known RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	YBR096W	P38256	230 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	RPS27B	P38711	82 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU13	P38725	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PEX7	P39108	375 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	GWT1	P47026	490 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	HOL1	P53389	586 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	MPP6	P53725	186 aa	Predicted RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	PAU10	Q03050	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PIN3	Q06449	215 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	CSI2	Q08054	341 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	COQ10	Q08058	207 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	BSC6	Q08280	497 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU20	Q08322	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	YDR215C	Q12240	137 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	PAU9	Q3E770	120 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	YDR034W-B	Q6Q5X2	51 aa		4.86	□□□□□ -1.63
ASH1	YKL185W	CDC39	P25655	2108 aa	Known RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	ILV5	P06168	395 aa	Known RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	NHP6A	P11632	93 aa	Known RBP	4.86	□□□□□ -1.63
ASH1	YKL185W	SPO13	P23624	291 aa		4.86	□□□□□ -1.63

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