RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W SCP1Q08873 200 aa2.64□□□□□ -1.99
SDH3YKL141W NIP7Q08962 181 aaKnown RBP2.64□□□□□ -1.99
SDH3YKL141W GRE1Q08969 168 aa2.64□□□□□ -1.99
SDH3YKL141W VAM3Q12241 283 aa2.64□□□□□ -1.99
SDH3YKL141W TFC7Q12415 435 aa2.64□□□□□ -1.99
SDH3YKL141W YJR112W-AQ3E743 109 aa2.64□□□□□ -1.99
SDH3YKL141W RPL1AP0CX43 217 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W RPL1BP0CX44 217 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W STE18P18852 110 aa2.63□□□□□ -1.99
SDH3YKL141W SEC22P22214 214 aa2.63□□□□□ -1.99
SDH3YKL141W CPR2P23285 205 aa2.63□□□□□ -1.99
SDH3YKL141W SCO1P23833 295 aa2.63□□□□□ -1.99
SDH3YKL141W PPA2P28239 310 aa2.63□□□□□ -1.99
SDH3YKL141W VMA5P31412 392 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W FMT1P32785 401 aa2.63□□□□□ -1.99
SDH3YKL141W YKL162CP36052 402 aa2.63□□□□□ -1.99
SDH3YKL141W YBR096WP38256 230 aa2.63□□□□□ -1.99
SDH3YKL141W SHG1P38337 142 aa2.63□□□□□ -1.99
SDH3YKL141W NAS2P40555 220 aa2.63□□□□□ -1.99
SDH3YKL141W YFR054CP43622 192 aa2.63□□□□□ -1.99
SDH3YKL141W SNN1P48232 102 aa2.63□□□□□ -1.99
SDH3YKL141W BRR6P53062 197 aa2.63□□□□□ -1.99
SDH3YKL141W PNC1P53184 216 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W OKP1P53298 406 aa2.63□□□□□ -1.99
SDH3YKL141W HHO1P53551 258 aa2.63□□□□□ -1.99
SDH3YKL141W INN1P53901 409 aa2.63□□□□□ -1.99
SDH3YKL141W AAH1P53909 347 aa2.63□□□□□ -1.99
SDH3YKL141W ACT1P60010 375 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W BUD25P85052 153 aa2.63□□□□□ -1.99
SDH3YKL141W PET191Q02772 108 aa2.63□□□□□ -1.99
SDH3YKL141W ODC1Q03028 310 aa2.63□□□□□ -1.99
SDH3YKL141W YPL039WQ03080 316 aa2.63□□□□□ -1.99
SDH3YKL141W DIG2Q03373 323 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W YML018CQ03730 393 aa2.63□□□□□ -1.99
SDH3YKL141W SDO1Q07953 250 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W ZEO1Q08245 113 aa2.63□□□□□ -1.99
SDH3YKL141W YRA1Q12159 226 aaKnown RBP2.63□□□□□ -1.99
SDH3YKL141W YRM1Q12340 786 aa2.63□□□□□ -1.99
SDH3YKL141W EAF3Q12432 401 aa2.63□□□□□ -1.99
SDH3YKL141W YOR032W-AQ8TGS1 66 aa2.63□□□□□ -1.99
SDH3YKL141W CCH1P50077 2039 aa2.63□□□□□ -1.99
SDH3YKL141W YAL064W-BO13512 126 aa2.62□□□□□ -1.99
SDH3YKL141W STF1P01098 86 aa2.62□□□□□ -1.99
SDH3YKL141W QCR2P07257 368 aa2.62□□□□□ -1.99
SDH3YKL141W UBI4P0CG63 381 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W RPL40AP0CH08 128 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W RPL40BP0CH09 128 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W YHR214C-DP0CX93 97 aa2.62□□□□□ -1.99
SDH3YKL141W ARO4P32449 370 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W HSP150P32478 413 aa2.62□□□□□ -1.99
SDH3YKL141W SEF1P34228 1148 aa2.62□□□□□ -1.99
SDH3YKL141W SRY1P36007 326 aa2.62□□□□□ -1.99
SDH3YKL141W POP8P38208 133 aa2.62□□□□□ -1.99
SDH3YKL141W IKI1P38874 309 aa2.62□□□□□ -1.99
SDH3YKL141W POP2P39008 433 aa2.62□□□□□ -1.99
SDH3YKL141W YNL208WP40159 199 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W POG1P40473 351 aa2.62□□□□□ -1.99
SDH3YKL141W EMC5P40540 141 aa2.62□□□□□ -1.99
SDH3YKL141W YIR035CP40579 254 aa2.62□□□□□ -1.99
SDH3YKL141W YPS6P40583 537 aa2.62□□□□□ -1.99
SDH3YKL141W GNA1P43577 159 aaPredicted RBP2.62□□□□□ -1.99
SDH3YKL141W YJR111CP47148 283 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W YGR126WP53274 230 aa2.62□□□□□ -1.99
SDH3YKL141W CAF40P53829 373 aa2.62□□□□□ -1.99
SDH3YKL141W ALG9P53868 555 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W RNH201P53942 307 aa2.62□□□□□ -1.99
SDH3YKL141W YCL001W-AP87012 153 aa2.62□□□□□ -1.99
SDH3YKL141W CGI121Q03705 181 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W YDR248CQ03786 193 aa2.62□□□□□ -1.99
SDH3YKL141W CAB5Q03941 241 aa2.62□□□□□ -1.99
SDH3YKL141W BER1Q06688 274 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W HEM25Q07534 307 aa2.62□□□□□ -1.99
SDH3YKL141W YPD1Q07688 167 aa2.62□□□□□ -1.99
SDH3YKL141W RDL2Q08742 149 aaKnown RBP2.62□□□□□ -1.99
SDH3YKL141W FCF2Q12035 217 aaPredicted RBP2.62□□□□□ -1.99
SDH3YKL141W YCT1Q12235 531 aa2.62□□□□□ -1.99
SDH3YKL141W PRP46Q12417 451 aaPredicted RBP2.62□□□□□ -1.99
SDH3YKL141W YLR146W-AQ2V2P1 62 aa2.62□□□□□ -1.99
SDH3YKL141W PCC1Q3E833 88 aa2.62□□□□□ -1.99
SDH3YKL141W FAB1P34756 2278 aa2.61□□□□□ -1.99
SDH3YKL141W IPP1P00817 287 aaKnown RBP2.61□□□□□ -1.99
SDH3YKL141W TPI1P00942 248 aaKnown RBP2.61□□□□□ -1.99
SDH3YKL141W CDC36P06100 191 aaPredicted RBP2.61□□□□□ -1.99
SDH3YKL141W SPS4P09937 338 aa2.61□□□□□ -1.99
SDH3YKL141W MIR1P23641 311 aaKnown RBP2.61□□□□□ -1.99
SDH3YKL141W VMA16P23968 213 aa2.61□□□□□ -1.99
SDH3YKL141W YCR101CP25607 182 aa2.61□□□□□ -1.99
SDH3YKL141W TIP1P27654 210 aaPredicted RBP2.61□□□□□ -1.99
SDH3YKL141W MSK1P32048 576 aa2.61□□□□□ -1.99
SDH3YKL141W AFG1P32317 509 aa2.61□□□□□ -1.99
SDH3YKL141W COS9P36034 407 aa2.61□□□□□ -1.99
SDH3YKL141W ECM31P38122 312 aa2.61□□□□□ -1.99
SDH3YKL141W GRE3P38715 327 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SDH3YKL141W GPI16P38875 610 aa2.61□□□□□ -1.99
SDH3YKL141W PSD1P39006 500 aa2.61□□□□□ -1.99
SDH3YKL141W SPC25P40014 221 aa2.61□□□□□ -1.99
SDH3YKL141W SHO1P40073 367 aa2.61□□□□□ -1.99
SDH3YKL141W PGD1P40356 397 aa2.61□□□□□ -1.99
SDH3YKL141W SLM1P40485 686 aa2.61□□□□□ -1.99
SDH3YKL141W CUP9P41817 306 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms