RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C SWI1P09547 1314 aa1.66□□□□□ -2.14
SHE2YKL130C TUS1Q06412 1307 aa1.66□□□□□ -2.14
SHE2YKL130C GCN2P15442 1659 aa1.65□□□□□ -2.15
SHE2YKL130C MET2P08465 486 aa1.65□□□□□ -2.15
SHE2YKL130C GCN3P14741 305 aa1.65□□□□□ -2.15
SHE2YKL130C DBF2P22204 572 aa1.65□□□□□ -2.15
SHE2YKL130C SEC22P22214 214 aa1.65□□□□□ -2.15
SHE2YKL130C TOM40P23644 387 aaKnown RBP1.65□□□□□ -2.15
SHE2YKL130C ATP7P30902 174 aa1.65□□□□□ -2.15
SHE2YKL130C SRY1P36007 326 aa1.65□□□□□ -2.15
SHE2YKL130C RCN1P36054 211 aa1.65□□□□□ -2.15
SHE2YKL130C YCR087C-AP37263 153 aa1.65□□□□□ -2.15
SHE2YKL130C COS8P38723 381 aa1.65□□□□□ -2.15
SHE2YKL130C ECM14P38836 430 aa1.65□□□□□ -2.15
SHE2YKL130C YER034WP40022 185 aaKnown RBP1.65□□□□□ -2.15
SHE2YKL130C PEX17P40155 199 aa1.65□□□□□ -2.15
SHE2YKL130C YIL059CP40520 121 aa1.65□□□□□ -2.15
SHE2YKL130C YIL001WP40560 513 aa1.65□□□□□ -2.15
SHE2YKL130C MDM34P53083 459 aa1.65□□□□□ -2.15
SHE2YKL130C YGL159WP53110 370 aa1.65□□□□□ -2.15
SHE2YKL130C YMD8Q03697 442 aa1.65□□□□□ -2.15
SHE2YKL130C YDR248CQ03786 193 aa1.65□□□□□ -2.15
SHE2YKL130C YML096WQ04489 525 aa1.65□□□□□ -2.15
SHE2YKL130C INM2Q05533 292 aa1.65□□□□□ -2.15
SHE2YKL130C YLR179CQ06252 201 aaKnown RBP1.65□□□□□ -2.15
SHE2YKL130C MSA1Q08471 629 aa1.65□□□□□ -2.15
SHE2YKL130C YPL257WQ08974 193 aa1.65□□□□□ -2.15
SHE2YKL130C GEP5Q12393 293 aa1.65□□□□□ -2.15
SHE2YKL130C NOT5Q12514 560 aaPredicted RBP1.65□□□□□ -2.15
SHE2YKL130C YOR020W-AQ3E824 90 aa1.65□□□□□ -2.15
SHE2YKL130C YPL229WQ99395 206 aa1.65□□□□□ -2.15
SHE2YKL130C QCR6P00127 147 aa1.64□□□□□ -2.15
SHE2YKL130C HIS3P06633 220 aa1.64□□□□□ -2.15
SHE2YKL130C ADH3P07246 375 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C APA2P22108 325 aa1.64□□□□□ -2.15
SHE2YKL130C ADE1P27616 306 aa1.64□□□□□ -2.15
SHE2YKL130C ERG24P32462 438 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C APS1P35181 156 aa1.64□□□□□ -2.15
SHE2YKL130C YPT52P36018 234 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C YGP1P38616 354 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C GRE3P38715 327 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SHE2YKL130C EGD2P38879 174 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C PFS2P42841 465 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C OST2P46964 130 aa1.64□□□□□ -2.15
SHE2YKL130C YJL016WP47072 561 aa1.64□□□□□ -2.15
SHE2YKL130C PRM8P53174 237 aa1.64□□□□□ -2.15
SHE2YKL130C SYF2P53277 215 aaPredicted RBP1.64□□□□□ -2.15
SHE2YKL130C GTR2P53290 341 aa1.64□□□□□ -2.15
SHE2YKL130C ERV29P53337 310 aa1.64□□□□□ -2.15
SHE2YKL130C GRH1Q04410 372 aaKnown RBP1.64□□□□□ -2.15
SHE2YKL130C FCF1Q05498 189 aaPredicted RBP1.64□□□□□ -2.15
SHE2YKL130C CDD1Q06549 142 aa1.64□□□□□ -2.15
SHE2YKL130C YLR030WQ07967 263 aa1.64□□□□□ -2.15
SHE2YKL130C CLP1Q08685 445 aaPredicted RBP1.64□□□□□ -2.15
SHE2YKL130C GPM2Q12008 311 aa1.64□□□□□ -2.15
SHE2YKL130C YRF1-2P40105 1681 aa1.64□□□□□ -2.15
SHE2YKL130C RPO41P13433 1351 aaKnown RBP1.63□□□□□ -2.15
SHE2YKL130C SGA1P08019 549 aa1.63□□□□□ -2.15
SHE2YKL130C KSS1P14681 368 aa1.63□□□□□ -2.15
SHE2YKL130C OAC1P32332 324 aa1.63□□□□□ -2.15
SHE2YKL130C SPS18P32572 300 aa1.63□□□□□ -2.15
SHE2YKL130C MSA2P36157 363 aa1.63□□□□□ -2.15
SHE2YKL130C MRPL28P36527 147 aa1.63□□□□□ -2.15
SHE2YKL130C DOG2P38773 246 aa1.63□□□□□ -2.15
SHE2YKL130C DOG1P38774 246 aa1.63□□□□□ -2.15
SHE2YKL130C RPF1P38805 295 aaKnown RBP1.63□□□□□ -2.15
SHE2YKL130C SEC72P39742 193 aaKnown RBP1.63□□□□□ -2.15
SHE2YKL130C RSM25P40496 264 aa1.63□□□□□ -2.15
SHE2YKL130C FIS1P40515 155 aa1.63□□□□□ -2.15
SHE2YKL130C MMS2P53152 137 aa1.63□□□□□ -2.15
SHE2YKL130C DIA1P54005 336 aa1.63□□□□□ -2.15
SHE2YKL130C YMR279CQ03263 540 aa1.63□□□□□ -2.15
SHE2YKL130C YDR114CQ04597 100 aa1.63□□□□□ -2.15
SHE2YKL130C YET3Q07451 203 aa1.63□□□□□ -2.15
SHE2YKL130C IES4Q08561 116 aa1.63□□□□□ -2.15
SHE2YKL130C MDM32Q12171 622 aa1.63□□□□□ -2.15
SHE2YKL130C BBP1Q12365 385 aa1.63□□□□□ -2.15
SHE2YKL130C NUP192P47054 1683 aa1.62□□□□□ -2.15
SHE2YKL130C RAD10P06838 210 aa1.62□□□□□ -2.15
SHE2YKL130C DSF1P0CX08 502 aa1.62□□□□□ -2.15
SHE2YKL130C YNR073CP0CX09 502 aa1.62□□□□□ -2.15
SHE2YKL130C FMT1P32785 401 aa1.62□□□□□ -2.15
SHE2YKL130C VPS51P36116 164 aa1.62□□□□□ -2.15
SHE2YKL130C YBR063CP38083 404 aa1.62□□□□□ -2.15
SHE2YKL130C SHG1P38337 142 aa1.62□□□□□ -2.15
SHE2YKL130C YAR068WP39564 161 aa1.62□□□□□ -2.15
SHE2YKL130C YJR056CP47115 236 aa1.62□□□□□ -2.15
SHE2YKL130C YJR141WP47172 347 aaPredicted RBP1.62□□□□□ -2.15
SHE2YKL130C IGO1P53897 168 aa1.62□□□□□ -2.15
SHE2YKL130C NIP7Q08962 181 aaKnown RBP1.62□□□□□ -2.15
SHE2YKL130C RRP5Q05022 1729 aaKnown RBP1.62□□□□□ -2.15
SHE2YKL130C YHR139C-AO13536 103 aa1.61□□□□□ -2.15
SHE2YKL130C SEC4P07560 215 aaKnown RBP1.61□□□□□ -2.15
SHE2YKL130C RPS23AP0CX29 145 aaKnown RBP1.61□□□□□ -2.15
SHE2YKL130C RPS23BP0CX30 145 aa1.61□□□□□ -2.15
SHE2YKL130C FCY2P17064 533 aa1.61□□□□□ -2.15
SHE2YKL130C RAD51P25454 400 aa1.61□□□□□ -2.15
SHE2YKL130C CAF4P36130 643 aa1.61□□□□□ -2.15
SHE2YKL130C ECM33P38248 429 aaKnown RBP1.61□□□□□ -2.15
SHE2YKL130C RMD6P39975 231 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 151.1 ms