RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W YIL134C-AQ45U18 67 aa5.96□□□□□ -1.45
NMD5YJR132W RAS1P01119 309 aa5.96□□□□□ -1.46
NMD5YJR132W TPK3P05986 398 aa5.96□□□□□ -1.46
NMD5YJR132W STE4P18851 423 aa5.96□□□□□ -1.46
NMD5YJR132W SNC1P31109 117 aa5.96□□□□□ -1.46
NMD5YJR132W REC114P32841 428 aa5.96□□□□□ -1.46
NMD5YJR132W MRPS5P33759 307 aa5.96□□□□□ -1.46
NMD5YJR132W YKL187CP34231 750 aa5.96□□□□□ -1.46
NMD5YJR132W PMU1P36069 295 aa5.96□□□□□ -1.46
NMD5YJR132W PDX3P38075 228 aaKnown RBP5.96□□□□□ -1.46
NMD5YJR132W YIR007WP40566 764 aa5.96□□□□□ -1.46
NMD5YJR132W CPR8P53728 308 aa5.96□□□□□ -1.46
NMD5YJR132W APJ1P53940 528 aa5.96□□□□□ -1.46
NMD5YJR132W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
NMD5YJR132W COF1Q03048 143 aaKnown RBP5.96□□□□□ -1.46
NMD5YJR132W CUE4Q04201 117 aaPredicted RBP5.96□□□□□ -1.46
NMD5YJR132W SCW10Q04951 389 aa5.96□□□□□ -1.46
NMD5YJR132W UBC5P15732 148 aa5.96□□□□□ -1.46
NMD5YJR132W SPC25P40014 221 aa5.96□□□□□ -1.46
NMD5YJR132W RPL13BP40212 199 aaKnown RBP5.96□□□□□ -1.46
NMD5YJR132W YIL024CP40543 189 aa5.96□□□□□ -1.46
NMD5YJR132W SYF2P53277 215 aaPredicted RBP5.96□□□□□ -1.46
NMD5YJR132W YLR152CP54072 576 aa5.96□□□□□ -1.46
NMD5YJR132W THI74Q04083 370 aa5.96□□□□□ -1.46
NMD5YJR132W SLM5P25345 492 aaKnown RBP5.95□□□□□ -1.46
NMD5YJR132W YCL002CP25565 263 aa5.95□□□□□ -1.46
NMD5YJR132W PDC2P32896 925 aa5.95□□□□□ -1.46
NMD5YJR132W YPS6P40583 537 aa5.95□□□□□ -1.46
NMD5YJR132W OST3P48439 350 aa5.95□□□□□ -1.46
NMD5YJR132W YGR219WP53307 113 aa5.95□□□□□ -1.46
NMD5YJR132W TEX1P53851 422 aaKnown RBP5.95□□□□□ -1.46
NMD5YJR132W AIM11P87275 137 aa5.95□□□□□ -1.46
NMD5YJR132W YOS1Q3E834 85 aa5.95□□□□□ -1.46
NMD5YJR132W YRF1-2P40105 1681 aa5.95□□□□□ -1.46
NMD5YJR132W MRPL6P32904 214 aa5.95□□□□□ -1.46
NMD5YJR132W PEX22P39718 180 aa5.95□□□□□ -1.46
NMD5YJR132W YNL095CP53932 642 aa5.95□□□□□ -1.46
NMD5YJR132W MRX11Q03079 207 aa5.95□□□□□ -1.46
NMD5YJR132W HRI1Q05905 244 aaKnown RBP5.95□□□□□ -1.46
NMD5YJR132W YLR030WQ07967 263 aa5.95□□□□□ -1.46
NMD5YJR132W MRPL28P36527 147 aa5.94□□□□□ -1.46
NMD5YJR132W TRR2P38816 342 aa5.94□□□□□ -1.46
NMD5YJR132W ECM14P38836 430 aa5.94□□□□□ -1.46
NMD5YJR132W IPT1P38954 527 aa5.94□□□□□ -1.46
NMD5YJR132W YER079WP40052 210 aaKnown RBP5.94□□□□□ -1.46
NMD5YJR132W INP1Q03694 420 aa5.94□□□□□ -1.46
NMD5YJR132W FCF1Q05498 189 aaPredicted RBP5.94□□□□□ -1.46
NMD5YJR132W POS5Q06892 414 aa5.94□□□□□ -1.46
NMD5YJR132W MCT1Q12283 360 aa5.94□□□□□ -1.46
NMD5YJR132W YBR182C-AQ8TGU6 64 aa5.94□□□□□ -1.46
NMD5YJR132W NOP1P15646 327 aaKnown RBP5.94□□□□□ -1.46
NMD5YJR132W TRX3P25372 127 aa5.94□□□□□ -1.46
NMD5YJR132W POP5P28005 173 aa5.94□□□□□ -1.46
NMD5YJR132W RTG1P32607 177 aa5.94□□□□□ -1.46
NMD5YJR132W CUE1P38428 203 aa5.94□□□□□ -1.46
NMD5YJR132W PRE5P40302 234 aaKnown RBP5.94□□□□□ -1.46
NMD5YJR132W YIL012WP40551 113 aa5.94□□□□□ -1.46
NMD5YJR132W MHT1Q12525 324 aa5.94□□□□□ -1.46
NMD5YJR132W DNF2Q12675 1612 aa5.94□□□□□ -1.46
NMD5YJR132W DOP1Q03921 1698 aa5.94□□□□□ -1.46
NMD5YJR132W PEX34P25584 144 aa5.94□□□□□ -1.46
NMD5YJR132W DLS1P40366 167 aa5.94□□□□□ -1.46
NMD5YJR132W AIR1P40507 360 aaKnown RBP5.94□□□□□ -1.46
NMD5YJR132W EGT2P42835 1041 aa5.94□□□□□ -1.46
NMD5YJR132W YLR042CQ07990 161 aa5.94□□□□□ -1.46
NMD5YJR132W YOL024WQ08172 172 aa5.94□□□□□ -1.46
NMD5YJR132W YDL007C-AQ2V2Q0 85 aa5.94□□□□□ -1.46
NMD5YJR132W RPL2AP0CX45 254 aaKnown RBP5.93□□□□□ -1.46
NMD5YJR132W RPL2BP0CX46 254 aaKnown RBP5.93□□□□□ -1.46
NMD5YJR132W SAM35P14693 329 aa5.93□□□□□ -1.46
NMD5YJR132W YKR070WP36151 352 aaKnown RBP5.93□□□□□ -1.46
NMD5YJR132W TAD2P47058 250 aa5.93□□□□□ -1.46
NMD5YJR132W YMR099CQ03161 297 aaKnown RBP5.93□□□□□ -1.46
NMD5YJR132W ERP1Q05359 219 aaKnown RBP5.93□□□□□ -1.46
NMD5YJR132W ICT1Q12385 394 aa5.93□□□□□ -1.46
NMD5YJR132W YPR015CQ12531 247 aa5.93□□□□□ -1.46
NMD5YJR132W YPR145C-AQ2V2P0 78 aa5.93□□□□□ -1.46
NMD5YJR132W AAC1P04710 309 aa5.93□□□□□ -1.46
NMD5YJR132W CAP2P13517 287 aa5.93□□□□□ -1.46
NMD5YJR132W FAR3P46671 204 aa5.93□□□□□ -1.46
NMD5YJR132W UBX6P47049 396 aa5.93□□□□□ -1.46
NMD5YJR132W YLR224WQ05947 369 aa5.93□□□□□ -1.46
NMD5YJR132W STP4Q07351 490 aa5.93□□□□□ -1.46
NMD5YJR132W YOL131WQ08270 108 aa5.93□□□□□ -1.46
NMD5YJR132W MMT2Q08970 484 aa5.93□□□□□ -1.46
NMD5YJR132W RPL7BQ12213 244 aaKnown RBP5.93□□□□□ -1.46
NMD5YJR132W YBL112CQ3E7Y4 105 aa5.93□□□□□ -1.46
NMD5YJR132W YCR007CP25354 239 aa5.92□□□□□ -1.46
NMD5YJR132W SBH1P52870 82 aa5.92□□□□□ -1.46
NMD5YJR132W FMP41P53889 259 aaKnown RBP5.92□□□□□ -1.46
NMD5YJR132W LEE1Q02799 301 aaKnown RBP5.92□□□□□ -1.46
NMD5YJR132W YDR209CQ03480 137 aa5.92□□□□□ -1.46
NMD5YJR132W YMR087WQ04299 284 aa5.92□□□□□ -1.46
NMD5YJR132W VBA1Q04301 562 aa5.92□□□□□ -1.46
NMD5YJR132W TAZ1Q06510 381 aa5.92□□□□□ -1.46
NMD5YJR132W ERF2Q06551 359 aa5.92□□□□□ -1.46
NMD5YJR132W SWC7Q06707 132 aa5.92□□□□□ -1.46
NMD5YJR132W RPB3P16370 318 aaKnown RBP5.92□□□□□ -1.46
NMD5YJR132W YCR100CP25606 316 aa5.92□□□□□ -1.46
NMD5YJR132W TIP1P27654 210 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms